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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052940.3.1
CDS Infomation

CASP-like protein (AHRD V3.3 *** K4C1X4_SOLLC)
Sequence

ATGAAGGAGTTGTTTGGAGGTCCAGGTAGAGTGAGTGGGTTGGTATTGCGAATGGGTCAG
TGTTTATTTGCTGCTGCTTCTATGGTTGTAATGGCTTCTTCTCATGGTTTCGCCACTTGT
ACTGCTTTTTGCTATTTAATTGCATCCATGGGGCTGCAAGTAATATGGAGCTTCTCACTT
GCCTGCTTGGATATTCATGCCTTAAGATTGAAAAGAGATCTAAGGAATTACGTCTTTCTG
AGCTTGCTTGTAATCGGTGATTGGGTGACAGCCATTTTATCACTTGCTGCTGCATGCTCA
TCAGCCGGCGTGGTAGTTTTGATTATTAAAGATACAAATATGTGCATATCCACCCCTAAG
CTGTCCTGCCATATGTTTCAAATTTCAGTAGCTTTGGCTTTCCTCTCATGGTTCTTCCTT
GCCATTTCTTCCTGTGTCATGTTTTGGCTCGCGGCCTCTTGA

Peptide Sequence

PEP ID

Solyc05g052940.3.1
PEP Infomation

CASP-like protein (AHRD V3.3 *** K4C1X4_SOLLC)
Sequence

MKELFGGPGRVSGLVLRMGQCLFAAASMVVMASSHGFATCTAFCYLIASMGLQVIWSFSL
ACLDIHALRLKRDLRNYVFLSLLVIGDWVTAILSLAAACSSAGVVVLIIKDTNMCISTPK
LSCHMFQISVALAFLSWFFLAISSCVMFWLAAS*

Transcript Sequence

Transcript ID

Solyc05g052940.3.1
Transcript Infomation

CASP-like protein (AHRD V3.3 *** K4C1X4_SOLLC)
Sequence

AGATTCGAACTGTTCATGTAATCAATACCCATAAAAAAAATCAACATCAATTTGATCGGA
TCTAGGGTTTTAGTATTGTAAAGGAGTTTGTATGTGATTTTGTGGTAAATGAACAAGCAT
TCGATATAGTTATAGCGATAAAGAGAGAGAGAAAGAGGATGAAGGAGTTGTTTGGAGGTC
CAGGTAGAGTGAGTGGGTTGGTATTGCGAATGGGTCAGTGTTTATTTGCTGCTGCTTCTA
TGGTTGTAATGGCTTCTTCTCATGGTTTCGCCACTTGTACTGCTTTTTGCTATTTAATTG
CATCCATGGGGCTGCAAGTAATATGGAGCTTCTCACTTGCCTGCTTGGATATTCATGCCT
TAAGATTGAAAAGAGATCTAAGGAATTACGTCTTTCTGAGCTTGCTTGTAATCGGTGATT
GGGTGACAGCCATTTTATCACTTGCTGCTGCATGCTCATCAGCCGGCGTGGTAGTTTTGA
TTATTAAAGATACAAATATGTGCATATCCACCCCTAAGCTGTCCTGCCATATGTTTCAAA
TTTCAGTAGCTTTGGCTTTCCTCTCATGGTTCTTCCTTGCCATTTCTTCCTGTGTCATGT
TTTGGCTCGCGGCCTCTTGATTAAAGGTCCCTTCTCTGTACGCTACCACGTATTCATATG
GTTATGTGAATATTACTGATTTTGAGAACTTGTGTACAGGAAGTAGTAACTATGTTTTAA
CTTTAATGGCTTGTTTTGAGGTTCATCATATTTGGAAATGAGCATCCTTCTAATTGAACC
ATTTTCTTTTTTTGGTTGTGTAATACCATGGATTCATGAAGTAAGATGTCACTCAAGTTG
AAAGCACACAATTTGTCTTTCATTGCTTTTGACATGATTTTTGACATCATAATTCATAAA
CCAATTCACTTGCCTTGTAACTGAAACTTTGGCTAAAACTATTAACTAAATGAAAAAATA
AGAAAACCTTCAAACCACACCATTATATACATGCACAAACTCTAAACATCAGAGACAGAA
GATTGATAAATTACAACAGTCTAACAACATCTGAACCAGAAAAGAGTACCCTTAAAAGCT
ATAATAGTTGCTGCTCTAACATACCAGAGTGTCTTCGATACATCAGAAAATCCAGTAGCG
AGGAGGATTTACACTGTATCCTAAGTTGACATGACACGATAGGTAGACGATATCTTTCTT
TGCATGTTGCTGCATTGGTAGGATGACGATGACCACCATATTGTTGCAACTAAAGAATTT
AACTCCATGCTAGTGTGTGTATATATATATATATATGCAAGCAAACTACTATATGTACCA
TATGCACATATCAAATCTTGAATTGAGAACCAAAGGTACCTAACCTAGCAAAACTGGTGA
ATTTGCATCGATAAGATGAGTAGTAGTTCAAGTAGGTGATTCAGCTAGTAGAAGTGTGTG
CCACCATCC