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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052930.3.1
CDS Infomation

Protein YIPF (AHRD V3.3 *** K4C1X3_SOLLC)
Sequence

ATGGACGATTCTTACACCAATTTCCCGACGAGTCACCTTGTTGGCTCAGTGCCGGCAGTT
CTCACTGAAGAAAAGAACAGCTATAAACCACAAGCCCCTGCAGCAAATTCTCCCATACTT
CCTCCAAATAATGGTCCAAATGCAGGAAGAGGGTATCAAACTCTTGGAGGTGAAGGAGAT
GGGCAGCAATCAACAAACAGGTGGAATGGAGTATTTAGCGTGTCATCTTATACAGAATAT
TTTAACGTGGATACAGACCTTGTCTTGAACAGATTGATGAGTTCATTGAACCCTACTACT
GGAGATTTCTTCAGCAAGATTGATGCTAACCCTGACCTTTACGGGCTTGTCTGGATATCT
ACTACTTTAGTGTTTGTCCTTTCTTCCATCGGGAACTGTGCCACATACCTGATGCAGAGC
GATAGCAATAGTTCTTGGAACTTTGATGTCAATTATGTGAATGTGGCAGCCTGCTCAGTA
TATGGTTATGCATTGCTAGTGCCATTGGGGTTTTACTTCTTGATTCGGTATATGGGTATA
AGTGCTAGCCTGATACGCTTCTGGTGCTTGTGGGGATATTCACTCTTTGTTTTAGTTCTG
AGCTCCTTTCTGTTGATCATCCCCGTCGAGTTCCTTAGGTGGACCATCACAATTGCTGCT
GCCACAACATCAGCTAGTTTCGTTGCGTTGAACCTCAGAACATATGTACAGTCAGATGAT
CTCATGATGATACTGGTTGCTTCTTTTGCTCTGCAAGCAGCTTTGACAATCTTCATCAAG
ATGTGGTTCTTCTCTTAA

Peptide Sequence

PEP ID

Solyc05g052930.3.1
PEP Infomation

Protein YIPF (AHRD V3.3 *** K4C1X3_SOLLC)
Sequence

MDDSYTNFPTSHLVGSVPAVLTEEKNSYKPQAPAANSPILPPNNGPNAGRGYQTLGGEGD
GQQSTNRWNGVFSVSSYTEYFNVDTDLVLNRLMSSLNPTTGDFFSKIDANPDLYGLVWIS
TTLVFVLSSIGNCATYLMQSDSNSSWNFDVNYVNVAACSVYGYALLVPLGFYFLIRYMGI
SASLIRFWCLWGYSLFVLVLSSFLLIIPVEFLRWTITIAAATTSASFVALNLRTYVQSDD
LMMILVASFALQAALTIFIKMWFFS*

Transcript Sequence

Transcript ID

Solyc05g052930.3.1
Transcript Infomation

Protein YIPF (AHRD V3.3 *** K4C1X3_SOLLC)
Sequence

TCCGTCGCTGTTCAGACGTACCGGTCACTTTCCTCCTCCATTTTCGTTAATCAAAAAGCT
TCTTCATTAATCCAAAACAAATTTCAAAGAGGAAATTTCACCATTAATCTTATCAACAAT
CGGTGCTGCTTGATCTCCTTCGTATTTGTCTTCATTATACAATCCGATGGACGATTCTTA
CACCAATTTCCCGACGAGTCACCTTGTTGGCTCAGTGCCGGCAGTTCTCACTGAAGAAAA
GAACAGCTATAAACCACAAGCCCCTGCAGCAAATTCTCCCATACTTCCTCCAAATAATGG
TCCAAATGCAGGAAGAGGGTATCAAACTCTTGGAGGTGAAGGAGATGGGCAGCAATCAAC
AAACAGGTGGAATGGAGTATTTAGCGTGTCATCTTATACAGAATATTTTAACGTGGATAC
AGACCTTGTCTTGAACAGATTGATGAGTTCATTGAACCCTACTACTGGAGATTTCTTCAG
CAAGATTGATGCTAACCCTGACCTTTACGGGCTTGTCTGGATATCTACTACTTTAGTGTT
TGTCCTTTCTTCCATCGGGAACTGTGCCACATACCTGATGCAGAGCGATAGCAATAGTTC
TTGGAACTTTGATGTCAATTATGTGAATGTGGCAGCCTGCTCAGTATATGGTTATGCATT
GCTAGTGCCATTGGGGTTTTACTTCTTGATTCGGTATATGGGTATAAGTGCTAGCCTGAT
ACGCTTCTGGTGCTTGTGGGGATATTCACTCTTTGTTTTAGTTCTGAGCTCCTTTCTGTT
GATCATCCCCGTCGAGTTCCTTAGGTGGACCATCACAATTGCTGCTGCCACAACATCAGC
TAGTTTCGTTGCGTTGAACCTCAGAACATATGTACAGTCAGATGATCTCATGATGATACT
GGTTGCTTCTTTTGCTCTGCAAGCAGCTTTGACAATCTTCATCAAGATGTGGTTCTTCTC
TTAAAAGTTTCGCGTTACTATGCTTGTTGTATGCTCAACTCGTCGCGGTTTCAAAAGTGT
GCGGTTCGAGTTTTGTTTTCTTCCCTTTTCTGGTGTGTTTGGTGTACCATTTAATCAGTG
GTTTGCATAGTTGTGTGAAGCAAAGAGTGGACAGTACAAACAGAGAAAACTTGTAGAGAA
GTCATGTTGCATTATGTATTTTTGGTCTATAGGTGTATCATTACGTTTTTCATGAATGAA
GCTTATAGTAAAAAAATTAGACTTTTTTCCCATATGCTTTGAATTGTTGTTCTTTTTTTT
TTTTTGTTCTTT