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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052830.3.1
CDS Infomation

proline transporter 1 (AHRD V3.3 *** AT2G39890.2)
Sequence

ATGAATAGAATTGAACATAGGGAGGAAATGCCAGTAATTTCAAGTCCTTCAAATCCACAA
GAAATGGATCATCATCATATTGTGGCTTTAGAAGTTGAAGTTCCTCAAACTCTTCATCAA
ATTGGAACAGATTCATGGTTTCAAGTGGGAATTGTTTTGAGCACTGGTATCAACAGTGCC
TATGCACTAGGATATGCTGGCACAATCATGGTTCCTCTTGGCTGGACTGGTGGTGTTATT
GGTCTTGTTTTATCAACACTCATTTCATTATATGCAAGTACTCTTATGGCCAAGATTCAT
GAATATGGTGGAAAAAGGCATATTAGATTCAGAGATCTTGCAGGATTTTTGTATGGCCGT
ACAGCTTATTCAATTGTGTGGGCATCGCAATATGCTAATCTTTTCTTGATAAATATTGGA
TTTATCATTTTAGGTGGACAGGCCTTAAAGGCTTTCTATCTTCTCTTTAAGGACGATCAT
CGGATGAAGCTAGCATATTTCATCGCAATTGCTGGATTAGCATGCGTGTTATTCGCCATT
GCTGTTCCTACATTGTCATCGTTACGAGTTTGGCTGGCGATTTCATCTGCATTCAGTCTA
ATTTATCTCACTATAGTCTTTGTGTTGGCTCTTAGAGATGGTATTAATTCTCCTCCTAGA
GATTATAGTATTCCGGGATCGAAAATAAGCAGAGTTTTTACAACTGCTGGTGCAGCTGGA
AGTCTTATTTTTGTATTCAACACAGGAATGATTCCAGAGATCCAGGCTACTGTGAGAGCA
CCTACTGTGGACAACATGTTGAAAGCCCTTTATTTTCAGTTTAGTATAGGATCTGTACCT
GTTCATGTTGTTACTTATGTCGGATACTGGGCGTATGGATCCAGTTCAACGTCCTATTTG
CTCAACAATGTCAGCGGTCCAGTTTGGGCTAAGGCACTCGCCAACATTACTGCATTCTTG
CAAGCCATCATAGCTTTACATATATTTGCAAGTCCAGCGTATGAGTACTTGGATACCAAA
TACGACATCAAAGGAAGTGCACTTGCTATTCGGAACCTGGCATTCAGAACTCTAGTCAGA
GGAGGTTATCTCGCGCTTACTACTTTCCTATCTGCCCTATTACCTTTCTTGGGAGATTTC
ATGAGCCTTTCTGGTGCTATCAGCGCGATTCCACTCACGTTTATTCTTCCAAACCACATG
TATATGATTGCCATGAAAAAGAATCTATCTTCACTACAGAAGAGTTGGCATTTGCTCAAC
ATTATCTTTTTCAGCGCCTTAGCTGCTGCTGCATTAGTAGCTGCTTTCAGGCTTATAGCA
GTGGACTCGAAAACCTACCATACGTTTGCTGATTTGTAA

Peptide Sequence

PEP ID

Solyc05g052830.3.1
PEP Infomation

proline transporter 1 (AHRD V3.3 *** AT2G39890.2)
Sequence

MNRIEHREEMPVISSPSNPQEMDHHHIVALEVEVPQTLHQIGTDSWFQVGIVLSTGINSA
YALGYAGTIMVPLGWTGGVIGLVLSTLISLYASTLMAKIHEYGGKRHIRFRDLAGFLYGR
TAYSIVWASQYANLFLINIGFIILGGQALKAFYLLFKDDHRMKLAYFIAIAGLACVLFAI
AVPTLSSLRVWLAISSAFSLIYLTIVFVLALRDGINSPPRDYSIPGSKISRVFTTAGAAG
SLIFVFNTGMIPEIQATVRAPTVDNMLKALYFQFSIGSVPVHVVTYVGYWAYGSSSTSYL
LNNVSGPVWAKALANITAFLQAIIALHIFASPAYEYLDTKYDIKGSALAIRNLAFRTLVR
GGYLALTTFLSALLPFLGDFMSLSGAISAIPLTFILPNHMYMIAMKKNLSSLQKSWHLLN
IIFFSALAAAALVAAFRLIAVDSKTYHTFADL*

Transcript Sequence

Transcript ID

Solyc05g052830.3.1
Transcript Infomation

proline transporter 1 (AHRD V3.3 *** AT2G39890.2)
Sequence

ATGAATAGAATTGAACATAGGGAGGAAATGCCAGTAATTTCAAGTCCTTCAAATCCACAA
GAAATGGATCATCATCATATTGTGGCTTTAGAAGTTGAAGTTCCTCAAACTCTTCATCAA
ATTGGAACAGATTCATGGTTTCAAGTGGGAATTGTTTTGAGCACTGGTATCAACAGTGCC
TATGCACTAGGATATGCTGGCACAATCATGGTTCCTCTTGGCTGGACTGGTGGTGTTATT
GGTCTTGTTTTATCAACACTCATTTCATTATATGCAAGTACTCTTATGGCCAAGATTCAT
GAATATGGTGGAAAAAGGCATATTAGATTCAGAGATCTTGCAGGATTTTTGTATGGCCGT
ACAGCTTATTCAATTGTGTGGGCATCGCAATATGCTAATCTTTTCTTGATAAATATTGGA
TTTATCATTTTAGGTGGACAGGCCTTAAAGGCTTTCTATCTTCTCTTTAAGGACGATCAT
CGGATGAAGCTAGCATATTTCATCGCAATTGCTGGATTAGCATGCGTGTTATTCGCCATT
GCTGTTCCTACATTGTCATCGTTACGAGTTTGGCTGGCGATTTCATCTGCATTCAGTCTA
ATTTATCTCACTATAGTCTTTGTGTTGGCTCTTAGAGATGGTATTAATTCTCCTCCTAGA
GATTATAGTATTCCGGGATCGAAAATAAGCAGAGTTTTTACAACTGCTGGTGCAGCTGGA
AGTCTTATTTTTGTATTCAACACAGGAATGATTCCAGAGATCCAGGCTACTGTGAGAGCA
CCTACTGTGGACAACATGTTGAAAGCCCTTTATTTTCAGTTTAGTATAGGATCTGTACCT
GTTCATGTTGTTACTTATGTCGGATACTGGGCGTATGGATCCAGTTCAACGTCCTATTTG
CTCAACAATGTCAGCGGTCCAGTTTGGGCTAAGGCACTCGCCAACATTACTGCATTCTTG
CAAGCCATCATAGCTTTACATATATTTGCAAGTCCAGCGTATGAGTACTTGGATACCAAA
TACGACATCAAAGGAAGTGCACTTGCTATTCGGAACCTGGCATTCAGAACTCTAGTCAGA
GGAGGTTATCTCGCGCTTACTACTTTCCTATCTGCCCTATTACCTTTCTTGGGAGATTTC
ATGAGCCTTTCTGGTGCTATCAGCGCGATTCCACTCACGTTTATTCTTCCAAACCACATG
TATATGATTGCCATGAAAAAGAATCTATCTTCACTACAGAAGAGTTGGCATTTGCTCAAC
ATTATCTTTTTCAGCGCCTTAGCTGCTGCTGCATTAGTAGCTGCTTTCAGGCTTATAGCA
GTGGACTCGAAAACCTACCATACGTTTGCTGATTTGTAACTTCCTGTGCCATAACATCGA
GGGGAATGTCCCTCGTCTTATTCATTTAACGTTCAAGTTAATATCAATTTACTCAAGTCC
CCGGCCTCAGAGAGGTATATGTATGTTTGTAAATTGGATGAAAAAATATATATCATC