Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g052690.3.1
CDS Infomation	Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** K4C1V0_SOLLC)
Sequence	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCTCTCTTTTTTTTGGGTTAAAAAAGAA GACCCGGCCCAAAACAAAGCTTCACCCGTTTTTTCCAATCCGCAAAACCCTAACAACTTC ACTCACACACAGTTCTCTCCATCTTACAGTTCTTCGTATTTTGCTCGCTCACAGTACGAA GAACAGTGGATAACAACAATGGCGTCCAGCGATCAAACAGCGTTGCAATTTTCGGCATCA TCAGCAAGCTTATCGGCTAAAGTTCATCCTTTGGTCATTTTCAACATCTGCGATTGCTTT GTGAGGCGACCTGACCAAGCCGAGCGTATCATTGGCACTCTTCTCGGTTCTGTATTACCT GATGGTACTGTTGATGTTAGGAATTGTTATGCTGTTCCGCACAGCGAGTCTCAAGATCAG GTTGCACTGGATATTGATTACCATCATAACATGTTATCGTCTCATCAGAAGGTGAATCCA AAGGAAGTGATTGTTGGATGGTTTTCTACTGGTTTTGGAGTCTCTGGTGGTAGTGCTTTG ATCCAAGAGTTTTATTCTAGAGAAAGTTCAAATCCTATACATTTGACTGTTGATACTGGA TTTCAAAATGGGGAAGCTTCAATAAAAGGCTTTGTCTCTGTGCATTTGTCTCTTGGAGAT CAGCCACTTGCTGCTCAATTCCAGGAAATCCCATTGGATCTACGCATGGTTGAAGCTGAA AGGGTTGGATTTGATATGCTCAAGACAACAAGTGTGGACAAACTTCCCAATGATCTCGAA GGAATGGAAGCATCAATGGAGCGATTACTTGCTCTTATTGATGATGTCCACAAATATGTT GATGATGTCGTGGAAGGACGTCTACCCCAGGATAACAAAACAGGAAGATTCATTGCTGAT ACTGTGGCTACAATTCCTAAACTCTCATCCCAAGCCTTTGATAAGCTTGTGAATGATGGC CTTCAGGACCAATTGCTTTTGCTGTATTTGGCAAGCCTCACTAGGACTCAACTCAGCTTT GCAGAAAAGCTGAATACTGCTGCTCAGATCCTGTGA

Peptide Sequence

PEP ID	Solyc05g052690.3.1
PEP Infomation	Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** K4C1V0_SOLLC)
Sequence	XXXXXXXXXXFLSFFWVKKEDPAQNKASPVFSNPQNPNNFTHTQFSPSYSSSYFARSQYE EQWITTMASSDQTALQFSASSASLSAKVHPLVIFNICDCFVRRPDQAERIIGTLLGSVLP DGTVDVRNCYAVPHSESQDQVALDIDYHHNMLSSHQKVNPKEVIVGWFSTGFGVSGGSAL IQEFYSRESSNPIHLTVDTGFQNGEASIKGFVSVHLSLGDQPLAAQFQEIPLDLRMVEAE RVGFDMLKTTSVDKLPNDLEGMEASMERLLALIDDVHKYVDDVVEGRLPQDNKTGRFIAD TVATIPKLSSQAFDKLVNDGLQDQLLLLYLASLTRTQLSFAEKLNTAAQIL*

Transcript Sequence

Transcript ID	Solyc05g052690.3.1
Transcript Infomation	Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** K4C1V0_SOLLC)
Sequence	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCTCTCTTTTTTTTGGGTTAAAAAAGAA GACCCGGCCCAAAACAAAGCTTCACCCGTTTTTTCCAATCCGCAAAACCCTAACAACTTC ACTCACACACAGTTCTCTCCATCTTACAGTTCTTCGTATTTTGCTCGCTCACAGTACGAA GAACAGTGGATAACAACAATGGCGTCCAGCGATCAAACAGCGTTGCAATTTTCGGCATCA TCAGCAAGCTTATCGGCTAAAGTTCATCCTTTGGTCATTTTCAACATCTGCGATTGCTTT GTGAGGCGACCTGACCAAGCCGAGCGTATCATTGGCACTCTTCTCGGTTCTGTATTACCT GATGGTACTGTTGATGTTAGGAATTGTTATGCTGTTCCGCACAGCGAGTCTCAAGATCAG GTTGCACTGGATATTGATTACCATCATAACATGTTATCGTCTCATCAGAAGGTGAATCCA AAGGAAGTGATTGTTGGATGGTTTTCTACTGGTTTTGGAGTCTCTGGTGGTAGTGCTTTG ATCCAAGAGTTTTATTCTAGAGAAAGTTCAAATCCTATACATTTGACTGTTGATACTGGA TTTCAAAATGGGGAAGCTTCAATAAAAGGCTTTGTCTCTGTGCATTTGTCTCTTGGAGAT CAGCCACTTGCTGCTCAATTCCAGGAAATCCCATTGGATCTACGCATGGTTGAAGCTGAA AGGGTTGGATTTGATATGCTCAAGACAACAAGTGTGGACAAACTTCCCAATGATCTCGAA GGAATGGAAGCATCAATGGAGCGATTACTTGCTCTTATTGATGATGTCCACAAATATGTT GATGATGTCGTGGAAGGACGTCTACCCCAGGATAACAAAACAGGAAGATTCATTGCTGAT ACTGTGGCTACAATTCCTAAACTCTCATCCCAAGCCTTTGATAAGCTTGTGAATGATGGC CTTCAGGACCAATTGCTTTTGCTGTATTTGGCAAGCCTCACTAGGACTCAACTCAGCTTT GCAGAAAAGCTGAATACTGCTGCTCAGATCCTGTGATTGATGATGATTTCATTCTCGTAA TGCAATGCCAGATTTTTGACCGCGTGACTGAATGGTCTGGCTTTTCTCAACGCGATCAAT CCTCTCAATAGATGAGGCTCATGGGTTTCAAGTATTGGCTCAGAGTACTCAATAGTTTAA CTAGACAGACGATTTTCCGTGCGAGAGAGACTCGGAGTACTCGATAGGTTAGAGGTCAGA GAGGTGTAAGGATACATAAGTTTCCATCTTTTTGTAACAGTTCATTGAAAATGTCCAGTA CCTTTGACAGCTTCAATTCGATTTTTTTTCAGAAACAGAAAATAGTAATATTAATACATA AAAACTTTCTTGAATTTGGCACAATTTGCAACTTGCACAATCTAAATTATGTTATGGTGG TTTGTATTACACTTTGAACTAC