Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052620.3.1
CDS Infomation

Coronatine-insensitive 1
Sequence

ATGGAGGAACGGAACTCAACGAGATTGAGTAGCTCAACAAACGATACAGTATGGGAGTGT
GTGATTCCGTATATACAGGAATCGCGTGATAGAGACGCGGTATCGTTGGTATGTAAGAGG
TGGTGGCAGATCGATGCGATTACTAGAAAGCATATAACTATGGCGTTGTGTTATACAGCG
AAACCAGAGCAGTTATCTAGAAGGTTTCCACATCTTGAATCGGTTAAACTGAAAGGGAAA
CCAAGAGCTGCTATGTTTAATTTGATACCGGAAGATTGGGGAGGATATGTTACACCTTGG
GTTATGGAGATAACTAAGTCGTTTAGTAAATTGAAAGCACTTCATTTTCGTAGAATGATT
GTTAGAGATTCGGATCTCGAATTACTTGCGAATCGTCGTGGAAGAGTTCTTCAAGTTTTG
AAGCTGGATAAGTGTTCTGGATTTTCTACTGATGGTCTTCTGCATATTTCTCGTTCCTGC
AAGAACTTAAGAACTTTGTTAATGGAAGAGAGTTATATAATTGAGAAAGATGGAGAATGG
GCACATGAACTAGCATTGAACAACACTGTTCTTGAGAATTTGAACTTTTACATGACAGAT
CTTCTGCAAGTTAGGGCTGAAGATCTTGAATTGATAGCAAGAAATTGTAAATCTCTAGTC
TCTATGAAAATTAGCGAGTGTGAAATTACGAATCTTCTTGGCTTCTTTAGAGCTGCGGCT
GCATTGGAGGAGTTTGGTGGTGGCGCATTTAATGACCAACCAGAACTTGTTGTTGAAAAT
GGCTATAATGAGCATTCCGGAAAATATGCCGCACTAGTCTTCCCTCCAAGATTATGTCAA
TTGGGCTTGACATACTTAGGGAGAAATGAGATGTCCATTCTCTTTCCTATTGCGTCTCGT
CTGAGGAAATTGGATCTTCTTTATGCACTTCTTGACACAGCAGCCCACTGTTTCTTACTG
CAAAGGTGTCCCAACTTGGAAATTCTTGAGACTAGGAATGTTGTTGGGGATAGAGGATTG
GAAGTGCTTGGCCAGTACTGTAAGAGGTTAAAGCGGCTCAGGATTGAGAGAGGAGCTGAT
GATCAGGAGATGGAGGATGAAGAAGGTGCGGTTACACACAGAGGATTGATTGATTTGGCA
AAGGGATGTCTTGAACTAGAATACATGGCTGTTTATGTGTCAGATATTACTAATGAAGCT
TTGGAAGTTATTGGTACATATCTGAAAAATCTGAGTGATTTTCGGCTGGTTTTGCTTGAC
AGAGAAGAAAGAATAACAGATCTGCCACTTGATAATGGTGTGCGTGCTTTACTAAGAGGT
TGCCATAATCTTAGAAGATTTGCCCTCTATGTCCGGCCTGGGGGCCTTACTGATGTAGGT
CTCAGTTATGTCGGGCAATACAGCCCAAACGTGAGATGGATGCTTCTGGGATACGTTGGG
GAATCCGATCATGGCCTTCTGGAGTTCTCTAAAGGATGTCCGAGCCTGCAAAAGCTAGAA
GTGAGAGGCTGCTGTTTCAGTGAACGTGCATTAGCCTTGGCTACCTTGCAGCTAAAATCG
TTAAGGTATCTATGGGTACAAGGATACAGGGCATCTTCAGCTGGTCGTGATCTCTTAGCG
ATGGCTCGCCCATTCTGGAATATTGAATTGATTCCTGCAAGACGAGTTATTGCCAACGAT
GGAAATAATGCAGAAACTGTAGTCTCGGAGCATCCAGCCCATATACTTGCCTACTATTCT
CTTGCCGGACAAAGAACAGATTTTCCAGACACTGTCAAGCCTTTGGACCCAACTTACCTT
CTCGCTGAATAG

Peptide Sequence

PEP ID

Solyc05g052620.3.1
PEP Infomation

Coronatine-insensitive 1
Sequence

MEERNSTRLSSSTNDTVWECVIPYIQESRDRDAVSLVCKRWWQIDAITRKHITMALCYTA
KPEQLSRRFPHLESVKLKGKPRAAMFNLIPEDWGGYVTPWVMEITKSFSKLKALHFRRMI
VRDSDLELLANRRGRVLQVLKLDKCSGFSTDGLLHISRSCKNLRTLLMEESYIIEKDGEW
AHELALNNTVLENLNFYMTDLLQVRAEDLELIARNCKSLVSMKISECEITNLLGFFRAAA
ALEEFGGGAFNDQPELVVENGYNEHSGKYAALVFPPRLCQLGLTYLGRNEMSILFPIASR
LRKLDLLYALLDTAAHCFLLQRCPNLEILETRNVVGDRGLEVLGQYCKRLKRLRIERGAD
DQEMEDEEGAVTHRGLIDLAKGCLELEYMAVYVSDITNEALEVIGTYLKNLSDFRLVLLD
REERITDLPLDNGVRALLRGCHNLRRFALYVRPGGLTDVGLSYVGQYSPNVRWMLLGYVG
ESDHGLLEFSKGCPSLQKLEVRGCCFSERALALATLQLKSLRYLWVQGYRASSAGRDLLA
MARPFWNIELIPARRVIANDGNNAETVVSEHPAHILAYYSLAGQRTDFPDTVKPLDPTYL
LAE*

Transcript Sequence

Transcript ID

Solyc05g052620.3.1
Transcript Infomation

Coronatine-insensitive 1
Sequence

TGGTTTTAATGGAGGAACGGAACTCAACGAGATTGAGTAGCTCAACAAACGATACAGTAT
GGGAGTGTGTGATTCCGTATATACAGGAATCGCGTGATAGAGACGCGGTATCGTTGGTAT
GTAAGAGGTGGTGGCAGATCGATGCGATTACTAGAAAGCATATAACTATGGCGTTGTGTT
ATACAGCGAAACCAGAGCAGTTATCTAGAAGGTTTCCACATCTTGAATCGGTTAAACTGA
AAGGGAAACCAAGAGCTGCTATGTTTAATTTGATACCGGAAGATTGGGGAGGATATGTTA
CACCTTGGGTTATGGAGATAACTAAGTCGTTTAGTAAATTGAAAGCACTTCATTTTCGTA
GAATGATTGTTAGAGATTCGGATCTCGAATTACTTGCGAATCGTCGTGGAAGAGTTCTTC
AAGTTTTGAAGCTGGATAAGTGTTCTGGATTTTCTACTGATGGTCTTCTGCATATTTCTC
GTTCCTGCAAGAACTTAAGAACTTTGTTAATGGAAGAGAGTTATATAATTGAGAAAGATG
GAGAATGGGCACATGAACTAGCATTGAACAACACTGTTCTTGAGAATTTGAACTTTTACA
TGACAGATCTTCTGCAAGTTAGGGCTGAAGATCTTGAATTGATAGCAAGAAATTGTAAAT
CTCTAGTCTCTATGAAAATTAGCGAGTGTGAAATTACGAATCTTCTTGGCTTCTTTAGAG
CTGCGGCTGCATTGGAGGAGTTTGGTGGTGGCGCATTTAATGACCAACCAGAACTTGTTG
TTGAAAATGGCTATAATGAGCATTCCGGAAAATATGCCGCACTAGTCTTCCCTCCAAGAT
TATGTCAATTGGGCTTGACATACTTAGGGAGAAATGAGATGTCCATTCTCTTTCCTATTG
CGTCTCGTCTGAGGAAATTGGATCTTCTTTATGCACTTCTTGACACAGCAGCCCACTGTT
TCTTACTGCAAAGGTGTCCCAACTTGGAAATTCTTGAGACTAGGAATGTTGTTGGGGATA
GAGGATTGGAAGTGCTTGGCCAGTACTGTAAGAGGTTAAAGCGGCTCAGGATTGAGAGAG
GAGCTGATGATCAGGAGATGGAGGATGAAGAAGGTGCGGTTACACACAGAGGATTGATTG
ATTTGGCAAAGGGATGTCTTGAACTAGAATACATGGCTGTTTATGTGTCAGATATTACTA
ATGAAGCTTTGGAAGTTATTGGTACATATCTGAAAAATCTGAGTGATTTTCGGCTGGTTT
TGCTTGACAGAGAAGAAAGAATAACAGATCTGCCACTTGATAATGGTGTGCGTGCTTTAC
TAAGAGGTTGCCATAATCTTAGAAGATTTGCCCTCTATGTCCGGCCTGGGGGCCTTACTG
ATGTAGGTCTCAGTTATGTCGGGCAATACAGCCCAAACGTGAGATGGATGCTTCTGGGAT
ACGTTGGGGAATCCGATCATGGCCTTCTGGAGTTCTCTAAAGGATGTCCGAGCCTGCAAA
AGCTAGAAGTGAGAGGCTGCTGTTTCAGTGAACGTGCATTAGCCTTGGCTACCTTGCAGC
TAAAATCGTTAAGGTATCTATGGGTACAAGGATACAGGGCATCTTCAGCTGGTCGTGATC
TCTTAGCGATGGCTCGCCCATTCTGGAATATTGAATTGATTCCTGCAAGACGAGTTATTG
CCAACGATGGAAATAATGCAGAAACTGTAGTCTCGGAGCATCCAGCCCATATACTTGCCT
ACTATTCTCTTGCCGGACAAAGAACAGATTTTCCAGACACTGTCAAGCCTTTGGACCCAA
CTTACCTTCTCGCTGAATAGGTTTGTAAATATAACTTTTCCTTGAGTGAAGTTGTTCGAG
GTCTATTTGCTTCCTTTTTAGGTGTCTTGTCCATATGTATGCCTCTTCTTTTCCTCCCCT
TTTTCCTTGATGAGAGTTTTTTTTCCACATTGATTTTGATCTTCTCTTTTAGACATGCAT
TCTGTAATAAATTTGCTTTCCTTGGGTTATCTGTAATCTAACATTTGGTGATCTACGTTC
CTAATCCCCCCTGATCTCATCTTCTTCTGTGCTTTGGGTTAAACTAAACATTTGGTCTTC
ACTTGTTCGATTTTA