Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052450.3.1
CDS Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7K771_MEDTR)
Sequence

ATGAAGCCACCTTCATCTTCATTTTATTTTTCCTCTTATTTTCTCAGAAAAATTCGTATT
TCTTATTTCCTCTTTATATTATTACCTTTTATTGTTCTTATCATTATTCTATATAGTGAA
AAATTCAATTGCGTTTTTAGCCAGCTTGATCCAAGAAATTCCAGCCAACAACAAAATTCC
ATCTCAAGTAATATTAAAAAGAACAAGAAGTTAGCATTTGCCATAGGAGAGACAAAAGAA
GGATGCAATGTGTTCAATGGCAAATGGGTTTGGGATGAGAAAAGGCCTTTATATGAAGAA
TCAGAGTGTCCTTATATACAACCACAATTGACTTGTCAAGAACATGGAAGGCCAGATAGA
AACTATCAACATTGGAGATGGCAACCTCATGATTGCTCTCTTCCGAGTTTCAACGCGACA
TTAATATTGGAAACACTTCGAGGAAAGAGGATGTTATTCGTTGGCGATTCCTTAAACAGA
GGACAATATGTTTCTATGGTTTGTCTTGTCCATAGACTCATTCCTGAGAATGCTAAATCC
ATGAAAACTATTGGTAATTTCGACGTTTTTACGATTAAGGATTATAATGCAACAATTGAG
TTTTATTGGGCACCATTTTTGCTGGAATCAAATTCTGATGATGCAGTAAAACATAGGATT
GAAGAAAGAGTTGTTAGAAAAGGTTCAATTAATGCACATGGAAAATATTGGAAAAGGGCT
AATATAATTATCTTCAATACTTATCTTTGGTGGATGAGGGGGCCTCATTTTAATATTTTG
CAAGGGTCTTTTGATGATGAAGTGAAAGATATAGTAGAGGTATCCACAGAAGAGGCATAT
GGGATGGCAATAAAGAGTATGTTGAGATGGATTAAAAGGAATATGGATTCAAACAAAACT
AGAGTCTTCTTCACTAGCATGTCACCTTCTCATGAAAAGAGCATAGAATGGGGAGGTGAA
CCAAATAAGAATTGTTACAATGAAACAAAAATGATAGATGATCCAAATTATTGGGGATCA
GATAGTAGAAAAAGCATAATGCAAGTGATTAAAGAAGAATTTGGCAAATCAAAAGTGCCA
ATTACATTTCTCAATATCACACAACTCTCAAGTTATAGAAAAGATGCACACACAACAATT
TACAAGAAGCAATGGAATAAATTAACACAAGAGCAACTAGCAAATCCATTTAGCTATGCT
GATTGTGTTCATTGGTGTTTGCCTGGCCTTCAAGATACTTGGAATGAACTTTTATTCACA
AAGCTTTTTTATCCTTAG

Peptide Sequence

PEP ID

Solyc05g052450.3.1
PEP Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7K771_MEDTR)
Sequence

MKPPSSSFYFSSYFLRKIRISYFLFILLPFIVLIIILYSEKFNCVFSQLDPRNSSQQQNS
ISSNIKKNKKLAFAIGETKEGCNVFNGKWVWDEKRPLYEESECPYIQPQLTCQEHGRPDR
NYQHWRWQPHDCSLPSFNATLILETLRGKRMLFVGDSLNRGQYVSMVCLVHRLIPENAKS
MKTIGNFDVFTIKDYNATIEFYWAPFLLESNSDDAVKHRIEERVVRKGSINAHGKYWKRA
NIIIFNTYLWWMRGPHFNILQGSFDDEVKDIVEVSTEEAYGMAIKSMLRWIKRNMDSNKT
RVFFTSMSPSHEKSIEWGGEPNKNCYNETKMIDDPNYWGSDSRKSIMQVIKEEFGKSKVP
ITFLNITQLSSYRKDAHTTIYKKQWNKLTQEQLANPFSYADCVHWCLPGLQDTWNELLFT
KLFYP*

Transcript Sequence

Transcript ID

Solyc05g052450.3.1
Transcript Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7K771_MEDTR)
Sequence

TACCTAACCAAAAAAATAAAAACAGAAAAAAAGAAAAAGATGTAGCTACAAAAGGTTTCA
AAAAAACAAAAATTACCAAAAAAAATGAAGCCACCTTCATCTTCATTTTATTTTTCCTCT
TATTTTCTCAGAAAAATTCGTATTTCTTATTTCCTCTTTATATTATTACCTTTTATTGTT
CTTATCATTATTCTATATAGTGAAAAATTCAATTGCGTTTTTAGCCAGCTTGATCCAAGA
AATTCCAGCCAACAACAAAATTCCATCTCAAGTAATATTAAAAAGAACAAGAAGTTAGCA
TTTGCCATAGGAGAGACAAAAGAAGGATGCAATGTGTTCAATGGCAAATGGGTTTGGGAT
GAGAAAAGGCCTTTATATGAAGAATCAGAGTGTCCTTATATACAACCACAATTGACTTGT
CAAGAACATGGAAGGCCAGATAGAAACTATCAACATTGGAGATGGCAACCTCATGATTGC
TCTCTTCCGAGTTTCAACGCGACATTAATATTGGAAACACTTCGAGGAAAGAGGATGTTA
TTCGTTGGCGATTCCTTAAACAGAGGACAATATGTTTCTATGGTTTGTCTTGTCCATAGA
CTCATTCCTGAGAATGCTAAATCCATGAAAACTATTGGTAATTTCGACGTTTTTACGATT
AAGGATTATAATGCAACAATTGAGTTTTATTGGGCACCATTTTTGCTGGAATCAAATTCT
GATGATGCAGTAAAACATAGGATTGAAGAAAGAGTTGTTAGAAAAGGTTCAATTAATGCA
CATGGAAAATATTGGAAAAGGGCTAATATAATTATCTTCAATACTTATCTTTGGTGGATG
AGGGGGCCTCATTTTAATATTTTGCAAGGGTCTTTTGATGATGAAGTGAAAGATATAGTA
GAGGTATCCACAGAAGAGGCATATGGGATGGCAATAAAGAGTATGTTGAGATGGATTAAA
AGGAATATGGATTCAAACAAAACTAGAGTCTTCTTCACTAGCATGTCACCTTCTCATGAA
AAGAGCATAGAATGGGGAGGTGAACCAAATAAGAATTGTTACAATGAAACAAAAATGATA
GATGATCCAAATTATTGGGGATCAGATAGTAGAAAAAGCATAATGCAAGTGATTAAAGAA
GAATTTGGCAAATCAAAAGTGCCAATTACATTTCTCAATATCACACAACTCTCAAGTTAT
AGAAAAGATGCACACACAACAATTTACAAGAAGCAATGGAATAAATTAACACAAGAGCAA
CTAGCAAATCCATTTAGCTATGCTGATTGTGTTCATTGGTGTTTGCCTGGCCTTCAAGAT
ACTTGGAATGAACTTTTATTCACAAAGCTTTTTTATCCTTAGAAAAATTTATGGATGATT
GAAGCCATTTGTTTCAATATTTTTACTCAAAATTAGATGCAAGGTATTTTTTTTCTTAAT
CTAATTGAAGTGCTCAATGGATAAATGTACCCTAATCTTGTTAAAGGAAGATTGTATAGT
ATTGTATTGTATTTGTAGTACTCTGTTCTTTTTATGACTGATATTTTGATAGATATGGTG
TATTATTATTATTTAT