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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052440.2.1
CDS Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7K771_MEDTR)
Sequence

ATGGAACTGCCTCCTCCTTTACTCATCATTAGAAAAACTAGTATTTATAATTATCTTTTT
TTATTACTAAGTTTGGTTGTATTTTTGATTACTTACTCATCCCATGTACTTCCATCTTCT
TCATCAGTCACATCCTTAGCCAATTTGATTTGGCCAAATCCAAAATTTGCAAAAAAGAGC
AAAGAGAAATTACCATTTGCTATAGGAGAAACAAAGGAAGGATGCAATGTGTTCAATGGA
AAATGGATTTGGGATGAGAAAAGACCTTTATATGAAGAATCAGAGTGTCCTTTTATACAA
CCACAATTGACTTGTCAAGAACATGGAAGGCCAGATAAAGACTATCAACATTGGAGATGG
CAACCTCATGAGTGCTCTCTTCCGAGTTTCAACGCGACATTAATGTTGGAAACACTTCGA
GGGAAGAGGATGTTATTCGTGGGCGATTCTGTAAACAGAGGACAATATATTTCTATGGTT
TGTCTTGTCCATAGAATCATTCCTGAGAATGCTAAATCCATGAACACTGTTGGTAGTTTC
GACGTTTTCAACATTAAGGATTACAATGCAACAATTGAGTTTTATTGGGCACCATTTCTA
CTTGAATCAAATTCTGATAATCCAGGAAAACATAGGATTGAAGAAAGAGTTGTTCGAAAA
GATTCAATAAACACACATGGAAAATATTGGAAAGGGGCTGATATAATTGTGTTCAATACT
TACATTTGGTGGAGAACTGGTTTCAAATTTAATATTTTGCAAGGGTCTTTTGATGATAAA
GTGAAAGATATAGTGGAGGTATCCACAGAGGAAGCATATAGGATGGCAATGAAGAGTTTG
TTGAGATGGATTAAAAAGAATATGGATCCAAAGAAAACTAGAGTTTTCTTTTCTAGCATG
TCACCTTCTCATGAAAGGAGCATTGATTGGGGAGGTGAACCAAATAAAAATTGTTACAAT
GAAACAAAAATGATAGAAGATCCAAATTATTGGGGATCAGATTGTAGAAAAGGCATAATG
CAAGTGATTTCACAAGAATTTGGCAAATCAAAAATGCCAATTTCATTTCTCAATATTACA
CAACTCTCAAGTTATAGAAAAGAAGCACACACAACAATTTACAAGAAGCAATGGGGTAAA
TTAACACAAGAGCAACTAGCAAATCCATATAGCTATGCTGATTGTTTACATTGGTGTTTG
CCTGGCCTTCAAGATACTTGGAATGAACTTTTATTCACAAAGCTCTTTTATCCTTAA

Peptide Sequence

PEP ID

Solyc05g052440.2.1
PEP Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7K771_MEDTR)
Sequence

MELPPPLLIIRKTSIYNYLFLLLSLVVFLITYSSHVLPSSSSVTSLANLIWPNPKFAKKS
KEKLPFAIGETKEGCNVFNGKWIWDEKRPLYEESECPFIQPQLTCQEHGRPDKDYQHWRW
QPHECSLPSFNATLMLETLRGKRMLFVGDSVNRGQYISMVCLVHRIIPENAKSMNTVGSF
DVFNIKDYNATIEFYWAPFLLESNSDNPGKHRIEERVVRKDSINTHGKYWKGADIIVFNT
YIWWRTGFKFNILQGSFDDKVKDIVEVSTEEAYRMAMKSLLRWIKKNMDPKKTRVFFSSM
SPSHERSIDWGGEPNKNCYNETKMIEDPNYWGSDCRKGIMQVISQEFGKSKMPISFLNIT
QLSSYRKEAHTTIYKKQWGKLTQEQLANPYSYADCLHWCLPGLQDTWNELLFTKLFYP*

Transcript Sequence

Transcript ID

Solyc05g052440.2.1
Transcript Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7K771_MEDTR)
Sequence

AAAAAAGGTATTATAAATAATAAAATGTGATTATTAAATTATACGGAAAGAACAAAAAAA
TACATAATCATCTTGCATGTAAAATAGATAAATATAATTTTATTTATTAATATTAAAATC
AATGCTCACGATAATAAGCTTCTTCACTATCTTATCCAAGACTTCAATAATAATCATGTG
AGACACAAGTTAAAAGTCAAAATAAGTTTAGACTTTCATAAAACAATAACTTATTGAAAG
TCATAGTACTAAGGTTTCAATTGTAATTTTGACTATGAAATAAAAATAATAACAAAATCT
TAAAGCAAATTAAATAAAGACACACCATATCTACTTGCCTAAATTAAATTAATTGTAGGA
AAAAACACACAAAAATGGAAATATAGTTTGTCCCAAATTCAATGAACACAGAGCTTTTGT
AGACACATTAATAATTATTATTGATATTTATTGCCTAACTTGTTTAGAAAAAGAGAGAGA
GATGATTTAACCTTAATTAAAAAACAATGAATCTGATTAATCTCTAATTTTTCATTATGT
TAATCATGCTAGAGGATTCTACATAAAGCCAAGAAAATATATATAAAAATTACCCTTTTG
TTTAACTTCAAACCTTTAGCTTTTTTTTTTTTGTCACTTAGGCATATTTCAAAAAAATAA
AAAAAATAAAAAGATGGAACTGCCTCCTCCTTTACTCATCATTAGAAAAACTAGTATTTA
TAATTATCTTTTTTTATTACTAAGTTTGGTTGTATTTTTGATTACTTACTCATCCCATGT
ACTTCCATCTTCTTCATCAGTCACATCCTTAGCCAATTTGATTTGGCCAAATCCAAAATT
TGCAAAAAAGAGCAAAGAGAAATTACCATTTGCTATAGGAGAAACAAAGGAAGGATGCAA
TGTGTTCAATGGAAAATGGATTTGGGATGAGAAAAGACCTTTATATGAAGAATCAGAGTG
TCCTTTTATACAACCACAATTGACTTGTCAAGAACATGGAAGGCCAGATAAAGACTATCA
ACATTGGAGATGGCAACCTCATGAGTGCTCTCTTCCGAGTTTCAACGCGACATTAATGTT
GGAAACACTTCGAGGGAAGAGGATGTTATTCGTGGGCGATTCTGTAAACAGAGGACAATA
TATTTCTATGGTTTGTCTTGTCCATAGAATCATTCCTGAGAATGCTAAATCCATGAACAC
TGTTGGTAGTTTCGACGTTTTCAACATTAAGGATTACAATGCAACAATTGAGTTTTATTG
GGCACCATTTCTACTTGAATCAAATTCTGATAATCCAGGAAAACATAGGATTGAAGAAAG
AGTTGTTCGAAAAGATTCAATAAACACACATGGAAAATATTGGAAAGGGGCTGATATAAT
TGTGTTCAATACTTACATTTGGTGGAGAACTGGTTTCAAATTTAATATTTTGCAAGGGTC
TTTTGATGATAAAGTGAAAGATATAGTGGAGGTATCCACAGAGGAAGCATATAGGATGGC
AATGAAGAGTTTGTTGAGATGGATTAAAAAGAATATGGATCCAAAGAAAACTAGAGTTTT
CTTTTCTAGCATGTCACCTTCTCATGAAAGGAGCATTGATTGGGGAGGTGAACCAAATAA
AAATTGTTACAATGAAACAAAAATGATAGAAGATCCAAATTATTGGGGATCAGATTGTAG
AAAAGGCATAATGCAAGTGATTTCACAAGAATTTGGCAAATCAAAAATGCCAATTTCATT
TCTCAATATTACACAACTCTCAAGTTATAGAAAAGAAGCACACACAACAATTTACAAGAA
GCAATGGGGTAAATTAACACAAGAGCAACTAGCAAATCCATATAGCTATGCTGATTGTTT
ACATTGGTGTTTGCCTGGCCTTCAAGATACTTGGAATGAACTTTTATTCACAAAGCTCTT
TTATCCTTAA