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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052330.2.1
CDS Infomation

Beta-expansin-like protein (AHRD V3.3 *** Q9AXE4_TOBAC)
Sequence

ATGGTTATGGTTTCCAATTTTCCTAAAAATAAATATATTTTAATTTTTATTTATATTGTC
TTGGACTTGGTTAATTTTTATTCTTGTCAATCATTTATTAATAGTGATTTAGATGCTACT
GGATTTTCATTAGCAGTGGCAACTTGGTATGGAGATCCCACTGGAGCTGGAAGTGGTGGA
GCTTGTGGACTAGAAGATGATGTAGGAAAAATACCATATAACGCGATGATAACCGCGGGA
AATCAAGTTTTGTTCAAACATGGTTTAGGATGTGGTGCATGTTATCAGGTATTATGTAAT
CAAAATGAAGAATGTTCACAAAATCCAATTACAGTTACTCTTACAGATGAGTGTCCAGGA
ACATGTAATGATGATCCAATTCATTTTGATTTAAGTGGAAATGCCTTTGGAGCTATGGCA
AAATTTGGCCAAGCTGATCAATTACGTAGTCTTGGAAGAATTGATATTTATTATAAAAGG
GTGTCATGTGACCACAAGCAAAATATTATGTTTAAGGATCCAAACCCTTATTTCCTTGCA
ATTGCAATTGAAGCTCAAAATGGAGATGGTGATCTTTCTTTAGTTGAAATAAAACATACA
AATTCAAATGAATGGCTTCAAATGCAACAAATGTTTGGAGCAACATGGTCAATAAATATT
TATCCAGACACACAAATACCTCCTTTTTCTATTAGGTTAACTTCACAAAATAAACATCAA
GTTGAAGCTAATAATGTCATTCCTATAAATTGGCAAGCAAGAGAAATTTACTATTCAAAT
GATTTGAGGAAGTTTAGATATTACAAAGTGAAATTTTGGACTTCCTTTGTATAA

Peptide Sequence

PEP ID

Solyc05g052330.2.1
PEP Infomation

Beta-expansin-like protein (AHRD V3.3 *** Q9AXE4_TOBAC)
Sequence

MVMVSNFPKNKYILIFIYIVLDLVNFYSCQSFINSDLDATGFSLAVATWYGDPTGAGSGG
ACGLEDDVGKIPYNAMITAGNQVLFKHGLGCGACYQVLCNQNEECSQNPITVTLTDECPG
TCNDDPIHFDLSGNAFGAMAKFGQADQLRSLGRIDIYYKRVSCDHKQNIMFKDPNPYFLA
IAIEAQNGDGDLSLVEIKHTNSNEWLQMQQMFGATWSINIYPDTQIPPFSIRLTSQNKHQ
VEANNVIPINWQAREIYYSNDLRKFRYYKVKFWTSFV*

Transcript Sequence

Transcript ID

Solyc05g052330.2.1
Transcript Infomation

Beta-expansin-like protein (AHRD V3.3 *** Q9AXE4_TOBAC)
Sequence

ATGGTTATGGTTTCCAATTTTCCTAAAAATAAATATATTTTAATTTTTATTTATATTGTC
TTGGACTTGGTTAATTTTTATTCTTGTCAATCATTTATTAATAGTGATTTAGATGCTACT
GGATTTTCATTAGCAGTGGCAACTTGGTATGGAGATCCCACTGGAGCTGGAAGTGGTGGA
GCTTGTGGACTAGAAGATGATGTAGGAAAAATACCATATAACGCGATGATAACCGCGGGA
AATCAAGTTTTGTTCAAACATGGTTTAGGATGTGGTGCATGTTATCAGGTATTATGTAAT
CAAAATGAAGAATGTTCACAAAATCCAATTACAGTTACTCTTACAGATGAGTGTCCAGGA
ACATGTAATGATGATCCAATTCATTTTGATTTAAGTGGAAATGCCTTTGGAGCTATGGCA
AAATTTGGCCAAGCTGATCAATTACGTAGTCTTGGAAGAATTGATATTTATTATAAAAGG
GTGTCATGTGACCACAAGCAAAATATTATGTTTAAGGATCCAAACCCTTATTTCCTTGCA
ATTGCAATTGAAGCTCAAAATGGAGATGGTGATCTTTCTTTAGTTGAAATAAAACATACA
AATTCAAATGAATGGCTTCAAATGCAACAAATGTTTGGAGCAACATGGTCAATAAATATT
TATCCAGACACACAAATACCTCCTTTTTCTATTAGGTTAACTTCACAAAATAAACATCAA
GTTGAAGCTAATAATGTCATTCCTATAAATTGGCAAGCAAGAGAAATTTACTATTCAAAT
GATTTGAGGAAGTTTAGATATTACAAAGTGAAATTTTGGACTTCCTTTGTATAA