Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052210.3.1
CDS Infomation

transmembrane protein (AHRD V3.3 *-* AT3G51580.1)
Sequence

ATGGTGTTTTGGAGATTGGTTGTGGTGCTGATTACGTTGATTTCAGTTTCTTTGGAGCAA
TCTAATGCAAGCTCTGTACACCCTTTACAGCATTTAGATAATCAGGTAGCTCCATCACCA
AGGTCTGGTGCTGCTGTTAAAGGGAATTTAGGTACTGATCAAGTCCCTGTAGGTCAGCCA
ACGGCGGGTTTTGGTAGTGGTACTTGTATCGGTGTGTCTAATAAGTGTCAGGATGATCAT
ATTGGTATGACTGCCTGCTTTTTTCCTGCCGGGAAAGGACATGAGGAACCATTTCTGTTC
GTCCTGAACAACGGTGACAATGCTTTGACGCTGAAGGTCAATGTTTCATCTGCAAACAAA
ACGTATGAGAATATTCAGATACCAAAACATGATTTCAAACAGATTAATATTTCGTCCAAA
ATTGGAGGGAGTTCGTCAATTATGCTTGACGCTGGAACTGGGAAATGTACGATTAACATA
GGACGTTCATTATGGCAAGGCTACTTTAACATGCCATCTTATACCATGTATGTGAACCCA
ACTAATGGGGCATACTTGCTTGGTATGACAGCTCTTCTTATAGGAGGAATAGTTATCTGC
TGCAAGTTGAGAACGCAGGATCGACATGTTGATGGTATCGCATATCAGGAACTTGAAATG
GGACAACCCGAACCTCAATCTTCCATGAAGCTAGAAATTTCCTCGGAAGGGTGGAATGAG
AGTTGGGACGAGGATTGGGATGACGAGAAGGCAGATGAGTCACCGGATGGGAAAACCATA
AGCATAAAACAAAGCAAATGGTGA

Peptide Sequence

PEP ID

Solyc05g052210.3.1
PEP Infomation

transmembrane protein (AHRD V3.3 *-* AT3G51580.1)
Sequence

MVFWRLVVVLITLISVSLEQSNASSVHPLQHLDNQVAPSPRSGAAVKGNLGTDQVPVGQP
TAGFGSGTCIGVSNKCQDDHIGMTACFFPAGKGHEEPFLFVLNNGDNALTLKVNVSSANK
TYENIQIPKHDFKQINISSKIGGSSSIMLDAGTGKCTINIGRSLWQGYFNMPSYTMYVNP
TNGAYLLGMTALLIGGIVICCKLRTQDRHVDGIAYQELEMGQPEPQSSMKLEISSEGWNE
SWDEDWDDEKADESPDGKTISIKQSKW*

Transcript Sequence

Transcript ID

Solyc05g052210.3.1
Transcript Infomation

transmembrane protein (AHRD V3.3 *-* AT3G51580.1)
Sequence

TACACGTAAAATAAATATAAATTCTCTAGATTTAGCACTTTATATTATACAAAAAAAAAA
ATTATGTCTCCGCGGCTGATCGTGAAGTGAAGAAGAGAGGAAAAGCTCAAATGGCGATGG
CGTAGGAGAAGAGGAATTGGTGTGCGTGAAAAGTCAGGGGAAGACTTTCCATATGGAATT
AGTGTGTGACGTTGAAATCCATGGAAAAATTACGCTTTTTTTGACTATGTAAAAGTATTT
AACGAATGAAATGTGAGAAGAAGACTAATAGATTCATCTACATATACAAAAATCTTCAAT
AAACCCTTAATTTTGATTGTTGATTCTTACTCTCTGAAGAATAATTTTGATTGTTGATTC
TTACTCTCTGAAGAATAATTTTGATTGGGTTTGAAGAATTTTGTATATTTAGTCGTTGTA
GTTGACGGGGTCTTCTTCTTTGCCCTCTTTTTCTCCGTCAACCCTTTTCTGGGTTTTGTC
TTCTTCTCTTTAATTCATCGAAAGTTGTTATCTTTTTTGGTATTTTTGGATACCCAAATC
AAAAGTTTTTTCTTTTAGTACAATATGGTGTTTTGGAGATTGGTTGTGGTGCTGATTACG
TTGATTTCAGTTTCTTTGGAGCAATCTAATGCAAGCTCTGTACACCCTTTACAGCATTTA
GATAATCAGGTAGCTCCATCACCAAGGTCTGGTGCTGCTGTTAAAGGGAATTTAGGTACT
GATCAAGTCCCTGTAGGTCAGCCAACGGCGGGTTTTGGTAGTGGTACTTGTATCGGTGTG
TCTAATAAGTGTCAGGATGATCATATTGGTATGACTGCCTGCTTTTTTCCTGCCGGGAAA
GGACATGAGGAACCATTTCTGTTCGTCCTGAACAACGGTGACAATGCTTTGACGCTGAAG
GTCAATGTTTCATCTGCAAACAAAACGTATGAGAATATTCAGATACCAAAACATGATTTC
AAACAGATTAATATTTCGTCCAAAATTGGAGGGAGTTCGTCAATTATGCTTGACGCTGGA
ACTGGGAAATGTACGATTAACATAGGACGTTCATTATGGCAAGGCTACTTTAACATGCCA
TCTTATACCATGTATGTGAACCCAACTAATGGGGCATACTTGCTTGGTATGACAGCTCTT
CTTATAGGAGGAATAGTTATCTGCTGCAAGTTGAGAACGCAGGATCGACATGTTGATGGT
ATCGCATATCAGGAACTTGAAATGGGACAACCCGAACCTCAATCTTCCATGAAGCTAGAA
ATTTCCTCGGAAGGGTGGAATGAGAGTTGGGACGAGGATTGGGATGACGAGAAGGCAGAT
GAGTCACCGGATGGGAAAACCATAAGCATAAAACAAAGCAAATGGTGATTATTGTAATAA
GAGTTAACACTAAGACCA