Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g052200.3.1
CDS Infomation

Protein kinase (AHRD V3.3 *** A0A0K9NZM3_ZOSMR)
Sequence

ATGCTGCAATATGATTGGCTTATTGGTGCACAATACAAATCAAAGGAACTGCTGAAGTCT
GACTGGACCACAATCCGAAAGTCTCCACCTTGGACTATAGATTCTTGGGGTTTGGGCTGT
CTTATCTATGAACTGTTTTCTGGCACCAAGTTGAGCAACACAGAGGACCTGTGCAATACT
GCTTCTATTCCAAAGTCTCTACTTCCAGATTATCAGCGTCTCTTGAGCTCTATGCCCCCT
CGCAGGTTAAATTCATCCAAGCTTCTTGAAAATAGTGAATATTTCCAAAATAAGTTGGTG
GAGACTATTCAATTCATGGAAATACTTAATCTTAAGGATAGTGTAGAAAAAGACACTTTC
TTCCGTAAGCTTCCAAATCTAGCAGAGCAACTTCCTCGCGAAATTGTGCTGAAGAAGTTG
CTTCCTTTGCTAGCTTCTGCATTAGAATTTGGTTCAGCTGCTGCTCCTGCTTTAACTGCT
TTGTTGAAAATGGGTTCTTGGCTTTCAACAGATGAGTTTAGTGTCAAGGTACTGCCTACA
ATTATAAAACTTTTTGCCTCCAATGATCGGTCCATTCGAGTGGGTCTTCTGCAGCATATC
GATCAATATGGGGAGTCATTATCTGCAAAAATTGTTGAAGAGCAGGTTTATGCTCACGTG
GCTACTGGGTTCTCTGACACATCTGCTTTTCTCCGGGAGTTGACACTTAAATCTATGCTT
GTATTGGCTCCTAAGCTCTCACATCGCACTATATCGGGATCTTTGTTGAAATATCTTTCC
AAGCTACAGGTTGATGAAGAACCGGCAATTAGAACAAACACTACTATTTTGCTTGGAAAT
ATTGCCGGTTACCTCAATGAGGGGACAAGGAAAAGGGTTCTAATAAATGCACTCACTGTT
CGTGCCTTGCGTGATACATTTGCTCCTGCCCGAGCAGCAGGTATCATGGCTTTGTCTGCT
ACCAGTTCTTACTATGACGTGACTGAGATTGCAACCCGCATTTTACCTAATATTGTTGTA
TTTACGATTGATCCAGACAGTGATGTTCAATCAAAAGCATTCGAAGCAGTTGATCAATTT
TTGCAATTAGTCAAGCAGCACCATGAGAAGACTAACACTGGAGATACCAGCACCACAAGC
ATGGGAACTTCATCAATTCCAGGAAATGCGAGTTTGCTAGGTTGGGCTATGAGCTCACTG
ACTCTTAAAGGCGGTAAATCCTCTGAGCAGGGTTCATATGCTCCAGCTAGCTCAAGCATG
CCTCCTTCTGCAGTCCCCAATTCTAGCTCAATTGCAGATAGTTCGAGTATAACACCAATT
CATGTTAGTTCCAGCTCAGATATGACAGATCAGCATGTTTCAGTATCCCCATCATTAAAT
GATGGATGGGGAGAACTTGAAAATGGTCTAGAAGGTCTTGATGGTGATAAAGATGGTTGG
GATGATATCGAGCCCCAAGAAGAACCAAAACCATCTCCCTTTCTTGCAAATATCCAAGCT
GCTCAAAAACGTCCTGTCTCTCAACCAAAACCACAAGTTGCTAGTTTACGAGGAAGTATC
AAAAATGATGATGAAGACCCGTGGGGATCGGTACCTGCTACTGCTCCTGCTCCAAGAACT
AGTTCCCAGCCATCAAGCACTAGATCAAGTAGAACAGTCGACGATGATGAGGACCCATGG
GGTGCCATATCTGCCCCAGCACCTTCAGCAAAGTCATCTCTGAATGTGAAAAAAGGTGGA
TCATTAGATGCTAATGACCCATGGGCTGCTATTGCAGCTCCTGTACCGACTTCTAAAGCT
AGATCTTCAATTGGACGAGGCCGAGGAAACAAACCTACAGTTCCTAAATTGGGTGCCCAA
AGAATAAACCGAACATCGTCTGGAATGTAA

Peptide Sequence

PEP ID

Solyc05g052200.3.1
PEP Infomation

Protein kinase (AHRD V3.3 *** A0A0K9NZM3_ZOSMR)
Sequence

MLQYDWLIGAQYKSKELLKSDWTTIRKSPPWTIDSWGLGCLIYELFSGTKLSNTEDLCNT
ASIPKSLLPDYQRLLSSMPPRRLNSSKLLENSEYFQNKLVETIQFMEILNLKDSVEKDTF
FRKLPNLAEQLPREIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTDEFSVKVLPT
IIKLFASNDRSIRVGLLQHIDQYGESLSAKIVEEQVYAHVATGFSDTSAFLRELTLKSML
VLAPKLSHRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAGYLNEGTRKRVLINALTV
RALRDTFAPARAAGIMALSATSSYYDVTEIATRILPNIVVFTIDPDSDVQSKAFEAVDQF
LQLVKQHHEKTNTGDTSTTSMGTSSIPGNASLLGWAMSSLTLKGGKSSEQGSYAPASSSM
PPSAVPNSSSIADSSSITPIHVSSSSDMTDQHVSVSPSLNDGWGELENGLEGLDGDKDGW
DDIEPQEEPKPSPFLANIQAAQKRPVSQPKPQVASLRGSIKNDDEDPWGSVPATAPAPRT
SSQPSSTRSSRTVDDDEDPWGAISAPAPSAKSSLNVKKGGSLDANDPWAAIAAPVPTSKA
RSSIGRGRGNKPTVPKLGAQRINRTSSGM*

Transcript Sequence

Transcript ID

Solyc05g052200.3.1
Transcript Infomation

Protein kinase (AHRD V3.3 *** A0A0K9NZM3_ZOSMR)
Sequence

AATTTTTTTTAAAAAAATTCTTAATATATATGTTTCATTTTAAAATTTTTTCGCTTATTT
ATAGTGCGACGGCTAAACTTTACCAATATAAAAGCTAAAAATTACTGTCTATATTTAAAT
AAAACTATGCTTTCGTAGACCGCGAAGCACACAATATCTAAATCAAAAATCAATCACACT
ACAGAACTATAATTTCGTTCCGTAGCAGATCAATCGTTGTTCTTTTCCGGTTCCATCTGT
TCGCCGGTGATCGGAGATCTGTGAGATTCTCACGATGCTGAATTTCTTAAAAGGCGTCGT
CAGTGGATCTGGAACAGGCCTCAAAGATCTGCCATACAATATCGGTGAACCTTATTCATC
TGCTTGGGGCTCTTGGATTCATTACCGTGGCACTTCTAAGGATGATGGGACTCCTGTGTC
AGTATTTGCTCTCTCAGGAAGTAGCACAAATGATGGACATCTAGCTGCTGGAAGGAATGG
AGTCAAGAGACTTCGTACAGTTAGGCATCCAAATATTTTGTCATTTCTCCACAGCACTGA
AGCTGAAAATTTTGATGGTTCTTCTGCCAAAGTTACCATCTATATTGTTACTGAACCTGT
CATGCCACTCGCTGAGAAGCTTAAGGAATTAGGATTAAAAGGTACCCAGAGGGACGAGTA
TTATGCTTGGGGGTTGCATCGAATAGCCAAAGCTGTGAGCTTCTTAAATAACGACTGCAA
ACTTGTTCATGGAAATGTTTGTCTGGCTAGTGTTGTTGTTACGCAAACTCTGGACTGGAA
ATTGCACGCCTTTGATGTGCTTTCTGAGTTTGATGGACACAATGATCTGCTGTTGGACCA
ATGCTGCAATATGATTGGCTTATTGGTGCACAATACAAATCAAAGGAACTGCTGAAGTCT
GACTGGACCACAATCCGAAAGTCTCCACCTTGGACTATAGATTCTTGGGGTTTGGGCTGT
CTTATCTATGAACTGTTTTCTGGCACCAAGTTGAGCAACACAGAGGACCTGTGCAATACT
GCTTCTATTCCAAAGTCTCTACTTCCAGATTATCAGCGTCTCTTGAGCTCTATGCCCCCT
CGCAGGTTAAATTCATCCAAGCTTCTTGAAAATAGTGAATATTTCCAAAATAAGTTGGTG
GAGACTATTCAATTCATGGAAATACTTAATCTTAAGGATAGTGTAGAAAAAGACACTTTC
TTCCGTAAGCTTCCAAATCTAGCAGAGCAACTTCCTCGCGAAATTGTGCTGAAGAAGTTG
CTTCCTTTGCTAGCTTCTGCATTAGAATTTGGTTCAGCTGCTGCTCCTGCTTTAACTGCT
TTGTTGAAAATGGGTTCTTGGCTTTCAACAGATGAGTTTAGTGTCAAGGTACTGCCTACA
ATTATAAAACTTTTTGCCTCCAATGATCGGTCCATTCGAGTGGGTCTTCTGCAGCATATC
GATCAATATGGGGAGTCATTATCTGCAAAAATTGTTGAAGAGCAGGTTTATGCTCACGTG
GCTACTGGGTTCTCTGACACATCTGCTTTTCTCCGGGAGTTGACACTTAAATCTATGCTT
GTATTGGCTCCTAAGCTCTCACATCGCACTATATCGGGATCTTTGTTGAAATATCTTTCC
AAGCTACAGGTTGATGAAGAACCGGCAATTAGAACAAACACTACTATTTTGCTTGGAAAT
ATTGCCGGTTACCTCAATGAGGGGACAAGGAAAAGGGTTCTAATAAATGCACTCACTGTT
CGTGCCTTGCGTGATACATTTGCTCCTGCCCGAGCAGCAGGTATCATGGCTTTGTCTGCT
ACCAGTTCTTACTATGACGTGACTGAGATTGCAACCCGCATTTTACCTAATATTGTTGTA
TTTACGATTGATCCAGACAGTGATGTTCAATCAAAAGCATTCGAAGCAGTTGATCAATTT
TTGCAATTAGTCAAGCAGCACCATGAGAAGACTAACACTGGAGATACCAGCACCACAAGC
ATGGGAACTTCATCAATTCCAGGAAATGCGAGTTTGCTAGGTTGGGCTATGAGCTCACTG
ACTCTTAAAGGCGGTAAATCCTCTGAGCAGGGTTCATATGCTCCAGCTAGCTCAAGCATG
CCTCCTTCTGCAGTCCCCAATTCTAGCTCAATTGCAGATAGTTCGAGTATAACACCAATT
CATGTTAGTTCCAGCTCAGATATGACAGATCAGCATGTTTCAGTATCCCCATCATTAAAT
GATGGATGGGGAGAACTTGAAAATGGTCTAGAAGGTCTTGATGGTGATAAAGATGGTTGG
GATGATATCGAGCCCCAAGAAGAACCAAAACCATCTCCCTTTCTTGCAAATATCCAAGCT
GCTCAAAAACGTCCTGTCTCTCAACCAAAACCACAAGTTGCTAGTTTACGAGGAAGTATC
AAAAATGATGATGAAGACCCGTGGGGATCGGTACCTGCTACTGCTCCTGCTCCAAGAACT
AGTTCCCAGCCATCAAGCACTAGATCAAGTAGAACAGTCGACGATGATGAGGACCCATGG
GGTGCCATATCTGCCCCAGCACCTTCAGCAAAGTCATCTCTGAATGTGAAAAAAGGTGGA
TCATTAGATGCTAATGACCCATGGGCTGCTATTGCAGCTCCTGTACCGACTTCTAAAGCT
AGATCTTCAATTGGACGAGGCCGAGGAAACAAACCTACAGTTCCTAAATTGGGTGCCCAA
AGAATAAACCGAACATCGTCTGGAATGTAAATTACAACAACCAAGGGTCAATCAACACTG
AAAGAAGATTTCATGAGTCACTGTAAAATTTTCCCCTCATCAGGTGAGTAATAGTTCCAA
CTGTGAAACAATTGAAAATTGTGTTTGTTTCTAGATTTTTTAAACTTTTTTTGTGGAATA
TTTATCATCTTTTGAGCTTCATGGGGGTATATGGGTATAATTTTTACCCCCTAGTCATAG
ACACTGTATTCTTTTACACAAAACCGTTGATGCAAAATTCTTTGTAGTTCATGAGAGTCA
TTAACATTGAATTTTGTAGTTTTATTTTTATGAACTGAATCAGCATTTTCATCTCTTTC