Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g052130.3.1
CDS Infomation	metacaspase 1 (AHRD V3.3 *** AT1G02170.1),Pfam:PF00656
Sequence	ATGATGAAGTTTGTGGATTGTACCAATTGCAACACAACCTTACTACTCCCTAAGGGTGCT CAGTCGATGCGCTGCGCAATATGTTGCGCAGTAGTATCGACTGACACAACCGAATCTCGA AAGACGAGCCGATTAACAACATACATGAATAATTACTTTCCTATGTTACACGGCCGCACA TCTCCTGCGGCCGGACAGAAGATTCAACCCCCTCCGGCCTTTGGCCGGAAGAGGGCTTTG ATTATTGGAATTACATATAAAAATACTAAAGATGAGCTCCAAGGATGCATCAATGATGCT AAATGTATGAACTTCTTGCTTGTCAATAGATTCAAGTTCCCTCAAGAAGCTGTTATAATG CTCACTGAAGAAGAAAGAGATCCACAAAGAATTCCAACTCTACGTAACATACGAAAAGCA ATCTATTGGCTTATGCAAGGTGTTAAAGCAGGGGACTCTCTGGTGTTCCATTTTTCTGGT CATGGATTACAACAAAGGAACTACACTTTAGATGAAATCGATGGTTATGATGAAACACTT TGCCCTTTAGACTATGCTAAAAAAGGAATGATTGTTGATGATGAACTAAATGCAACACTA GTTAGGCCTCTTCCTCGTGGCGCTAAGCTTCACGCCATCATAGATGCTTGTCACAGTGGT ACTATGCTAGATTTACCCTATCTTTGTAGAATGGACAGAACTGGACGATATGTGTGGGAA GATCATCGTCCTCGATCAGGAACATGGAAAGGAACAAGTGGAGGAGAGGCTATATCTTTC AGTGGCTGTGATGATCATCAAAAGTCAGCAGATACAGATAGTTTAGCCAAGGTCATGTCA ACTGGTGCAATGACTTTCTCTTTTGTCCAAGCAATTGAGCGCGGACAGGGAACTACTTAT GGAAGTATACTGAATGCAATAAGATCTTCCATCCGCAATACAGATAGTGATTTAGGTGGC AATATCGTCAGTTCTCTTCTCACGATGCTAACAACCGGGAGAAGTAACTCCGGCTTTGGG ATGAGACAGGAACCACAGTTGACTGCTAATGAGACATTTGATGTGTACACCAAAAAGTTT TCACTGTAA

Peptide Sequence

PEP ID	Solyc05g052130.3.1
PEP Infomation	metacaspase 1 (AHRD V3.3 *** AT1G02170.1),Pfam:PF00656
Sequence	MMKFVDCTNCNTTLLLPKGAQSMRCAICCAVVSTDTTESRKTSRLTTYMNNYFPMLHGRT SPAAGQKIQPPPAFGRKRALIIGITYKNTKDELQGCINDAKCMNFLLVNRFKFPQEAVIM LTEEERDPQRIPTLRNIRKAIYWLMQGVKAGDSLVFHFSGHGLQQRNYTLDEIDGYDETL CPLDYAKKGMIVDDELNATLVRPLPRGAKLHAIIDACHSGTMLDLPYLCRMDRTGRYVWE DHRPRSGTWKGTSGGEAISFSGCDDHQKSADTDSLAKVMSTGAMTFSFVQAIERGQGTTY GSILNAIRSSIRNTDSDLGGNIVSSLLTMLTTGRSNSGFGMRQEPQLTANETFDVYTKKF SL*

Transcript Sequence

Transcript ID	Solyc05g052130.3.1
Transcript Infomation	metacaspase 1 (AHRD V3.3 *** AT1G02170.1),Pfam:PF00656
Sequence	CTTCATTATTCTTTTTAATTTTCTTAAAAATAATTATTTTAAAATGATGAAGTTTGTGGA TTGTACCAATTGCAACACAACCTTACTACTCCCTAAGGGTGCTCAGTCGATGCGCTGCGC AATATGTTGCGCAGTAGTATCGACTGACACAACCGAATCTCGAAAGACGAGCCGATTAAC AACATACATGAATAATTACTTTCCTATGTTACACGGCCGCACATCTCCTGCGGCCGGACA GAAGATTCAACCCCCTCCGGCCTTTGGCCGGAAGAGGGCTTTGATTATTGGAATTACATA TAAAAATACTAAAGATGAGCTCCAAGGATGCATCAATGATGCTAAATGTATGAACTTCTT GCTTGTCAATAGATTCAAGTTCCCTCAAGAAGCTGTTATAATGCTCACTGAAGAAGAAAG AGATCCACAAAGAATTCCAACTCTACGTAACATACGAAAAGCAATCTATTGGCTTATGCA AGGTGTTAAAGCAGGGGACTCTCTGGTGTTCCATTTTTCTGGTCATGGATTACAACAAAG GAACTACACTTTAGATGAAATCGATGGTTATGATGAAACACTTTGCCCTTTAGACTATGC TAAAAAAGGAATGATTGTTGATGATGAACTAAATGCAACACTAGTTAGGCCTCTTCCTCG TGGCGCTAAGCTTCACGCCATCATAGATGCTTGTCACAGTGGTACTATGCTAGATTTACC CTATCTTTGTAGAATGGACAGAACTGGACGATATGTGTGGGAAGATCATCGTCCTCGATC AGGAACATGGAAAGGAACAAGTGGAGGAGAGGCTATATCTTTCAGTGGCTGTGATGATCA TCAAAAGTCAGCAGATACAGATAGTTTAGCCAAGGTCATGTCAACTGGTGCAATGACTTT CTCTTTTGTCCAAGCAATTGAGCGCGGACAGGGAACTACTTATGGAAGTATACTGAATGC AATAAGATCTTCCATCCGCAATACAGATAGTGATTTAGGTGGCAATATCGTCAGTTCTCT TCTCACGATGCTAACAACCGGGAGAAGTAACTCCGGCTTTGGGATGAGACAGGAACCACA GTTGACTGCTAATGAGACATTTGATGTGTACACCAAAAAGTTTTCACTGTAACATCTTAA GCAATTTTTACACACTTCCTGGTTTCATTATAGTATGGGTGCACAGATATCGATTTGGAG TTATCGGAGGGAGAAATCTTAAGTCTACGCCGCTCCTTCAAGCCTTTGAAACTATCGAAA ATAAAATCTCTACATTTCGAGTTCTTTGACCTCTCTCTGTATTGATAAATTTACTTAAAT TTTTGCTGTTTTCATTTTTTTTTCTTTGTTCTGTTTACTAATCAAAGAACAAATGTAACA TTTCTTGGCATAACCTACTAGAGAATATGTGTGAAGTTTTGATACAAGAAATATTTGTAT GAACGTGCTACAGTATGGATCAATCGTTTATTCAAAATATTTAACAACATTGTGTCGATT T