Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g051800.3.1
CDS Infomation	RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT2G22120.2)
Sequence	ATGTCTTATTATGATTCTTCTTCTTCTTTAGTTCCTCCCCTGATTGATAAACCCAGTAAA GTTGACCTTGAAGCTGGAAACATTGACCAAGTTCAGTGTAGAATTTGCCTTGAAAATGAT GGTGAGGATTTTATTGCCCCTTGTAAATGCAAGGGTTCATCAAAGTATGTTCACCGAGAA TGCCTTGATCAATGGCGTGCTGTGAAGGAAGGATTTGCATTTTCTCATTGTACGACTTGC AAGGCTCCATTTTACTTGAGAGTTAACGATCTTCATAGAAAATGGCGAACCATAAAATTT CGGTTCTTTGTGACTACAGACATCTTGTTCATCTTTCTCGCAGTTCAGCTTGTTATAGCT GCACTGGGATATTTAGTATATGTGATTGATGCACATCAGAAGTTTTGGCTTCGTCTGCAT TGGGGATTTGGTAGCGAACTAGGCTTCTATTACATATGCGGAGCACTGTTATTTTTCGCG TTGGTGGGCATATCTGGCTGTTTCTTAACTTGCTTTGACGAAAGTGTGCGCGATGATTTG AGTCAGCCTTGCCAGAATGCATTGTCTTGTTGCTCTTGCGCAAGCTTGTGTGCAGACTGT CATACGCGTAGACCTCATACAGGTACAACTTATATTTGCATTGATACTAACATATGCTTT GACAATTGTTCAAACTCGACATGTGAATGTTGCTCCGAGAATCATTCTTGCACGGACTGT GAATGTGGGAGTTGCTTAGGAGGCGATGGTGATCAATCTGGGATACCGGTATTGTTAGTT GTAGCTGTAATCGTGCTAGGACTATTCGCCCTACTTGGCATGTTTTACAGTGTTTTGGTT GCTACAATGGTCGTACAGAGAATTTGGCAGCGACACTACCACATACTCGAGAAAAGAATG CTGACAAAGGAATATGTTGTGGAGGACGTTGGCGAGGTGGCATGTAACGATTGGTCACCG CCACCATTGCCACAACAGCATGTTCAGAAGCTGGAATCACTTGGACTTGTATAA

Peptide Sequence

PEP ID	Solyc05g051800.3.1
PEP Infomation	RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT2G22120.2)
Sequence	MSYYDSSSSLVPPLIDKPSKVDLEAGNIDQVQCRICLENDGEDFIAPCKCKGSSKYVHRE CLDQWRAVKEGFAFSHCTTCKAPFYLRVNDLHRKWRTIKFRFFVTTDILFIFLAVQLVIA ALGYLVYVIDAHQKFWLRLHWGFGSELGFYYICGALLFFALVGISGCFLTCFDESVRDDL SQPCQNALSCCSCASLCADCHTRRPHTGTTYICIDTNICFDNCSNSTCECCSENHSCTDC ECGSCLGGDGDQSGIPVLLVVAVIVLGLFALLGMFYSVLVATMVVQRIWQRHYHILEKRM LTKEYVVEDVGEVACNDWSPPPLPQQHVQKLESLGLV*

Transcript Sequence

Transcript ID	Solyc05g051800.3.1
Transcript Infomation	RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT2G22120.2)
Sequence	GGAGTTTTTTTAACTCCAAATAGGCAAATAATTCATATTTAAATAAGAATTAGAATATCA ATTTGATAATTTTCCAACAAATTATGAACTTAAAGTTAACTAAGCACAATTTATTTTGCT AATTGGAGAGGAAAACCAAAATAAAAATGTCTTATTATGATTCTTCTTCTTCTTTAGTTC CTCCCCTGATTGATAAACCCAGTAAAGTTGACCTTGAAGCTGGAAACATTGACCAAGTTC AGTGTAGAATTTGCCTTGAAAATGATGGTGAGGATTTTATTGCCCCTTGTAAATGCAAGG GTTCATCAAAGTATGTTCACCGAGAATGCCTTGATCAATGGCGTGCTGTGAAGGAAGGAT TTGCATTTTCTCATTGTACGACTTGCAAGGCTCCATTTTACTTGAGAGTTAACGATCTTC ATAGAAAATGGCGAACCATAAAATTTCGGTTCTTTGTGACTACAGACATCTTGTTCATCT TTCTCGCAGTTCAGCTTGTTATAGCTGCACTGGGATATTTAGTATATGTGATTGATGCAC ATCAGAAGTTTTGGCTTCGTCTGCATTGGGGATTTGGTAGCGAACTAGGCTTCTATTACA TATGCGGAGCACTGTTATTTTTCGCGTTGGTGGGCATATCTGGCTGTTTCTTAACTTGCT TTGACGAAAGTGTGCGCGATGATTTGAGTCAGCCTTGCCAGAATGCATTGTCTTGTTGCT CTTGCGCAAGCTTGTGTGCAGACTGTCATACGCGTAGACCTCATACAGGTACAACTTATA TTTGCATTGATACTAACATATGCTTTGACAATTGTTCAAACTCGACATGTGAATGTTGCT CCGAGAATCATTCTTGCACGGACTGTGAATGTGGGAGTTGCTTAGGAGGCGATGGTGATC AATCTGGGATACCGGTATTGTTAGTTGTAGCTGTAATCGTGCTAGGACTATTCGCCCTAC TTGGCATGTTTTACAGTGTTTTGGTTGCTACAATGGTCGTACAGAGAATTTGGCAGCGAC ACTACCACATACTCGAGAAAAGAATGCTGACAAAGGAATATGTTGTGGAGGACGTTGGCG AGGTGGCATGTAACGATTGGTCACCGCCACCATTGCCACAACAGCATGTTCAGAAGCTGG AATCACTTGGACTTGTATAAAACTTGAAGGAGTTAACAAAGGAAACATAAGATGGATTAC TACTATGGGGCAATTCTTGTTTATAACAGAAAAAATTTCTTTGAAAATAATTTTTTTACA CATATGTGATATGTGCATAGTTTATAAATGATCATAATTCACATAAATGTAATT