Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g051650.1.1
CDS Infomation

QWRF motif protein (DUF566) (AHRD V3.3 *** AT4G25190.1)
Sequence

ATGGAGAAGGAGAAAAATCGCGATCATCGCAACAATATTATTCCTCGATCATCAGCTAAT
TCTCCGCGTTTACTTAGAAGTAAAAGTGGAATGTCACTCCCAGAAATTCCCACAATCGAC
TCTGTTCCACCAAAGCTAGTCAATCGGTCAAAATCGACCACAAAATTGCGATCTAATAGT
AGAGGAGAAGAAAATGTTAGCCCATTGAAGATGATCAAGAATAACAAAAAATTTCAAGAA
AAGGAAGATCATCATAATCATAGTACTTTTGCTAAATTCTTACAAAAACGCGATAATGGA
TCAAAATCATCATCAACAACAACAACAGCAACAACAACGTGTGTTAGTACAAATAATAAT
TCGCGATCTGCATGGGCATTGTCACCGGGACGTCCTTTACCTATAGTCCCTAAGTCACCT
AGCTCGAGAAAGTTGAAAATGGACACGTCCAAGGACGTTAGTGATAGTGGTGGTGGTCGT
GGTGGTGTTACTGGCGTTTTAAAGTATTTTAAACAGAAAAAAGTTTCGCCGATACTAGAA
GAAGATTTTCATCAATATCGTCTTGTGAATAATAGATTAATACAATGGAGATTTGTCAAT
GCTCGTGTTGAGGCTTCTATGGCTGCAATCAAGAGGGTTGCACAGAAGAAGATGTTCAAT
GTATGGTTAAGAATTTCAATTATGAGAAATTTCACAGCTGAGAAGAAAATTGAAGTCCAA
AAAATGAAGCATGATATAAAAATAAATAAGATAATGAACTCTCAAAATTGTTTACTTAGA
GAGTGGCAAAGATTAGAATTGAAAAATTCTGAAGCTGTTGGAAGGGTAGCAAGAAAATTA
TCAGCAATTTCTCTTTGTCTTCCACTTGTTGATGGAGCTGAGGCAAAAGTTATGTCAATT
TACGATGCTATGATCTCAGCAGAGGAAGTTATGGACGGTATCCAGGATTTTATTATGAAT
ATGCAATGGCAGGTTGAGCAGTCATGTTATTTCCTCACACAACTTATAGTAATTTTAAAG
CAGGAGGAAGAGTTCTTGGAGGAGCTAGAGAGTCATTTAAAAACAGTTAATTCATTAGAG
GTAGAAGAGGAAACCTTGAGAGTACATTGTATCCAATTGGCTAAGGAGAGGATGACAAGA
TGGGAAGGAGAAGATCAATCCTAA

Peptide Sequence

PEP ID

Solyc05g051650.1.1
PEP Infomation

QWRF motif protein (DUF566) (AHRD V3.3 *** AT4G25190.1)
Sequence

MEKEKNRDHRNNIIPRSSANSPRLLRSKSGMSLPEIPTIDSVPPKLVNRSKSTTKLRSNS
RGEENVSPLKMIKNNKKFQEKEDHHNHSTFAKFLQKRDNGSKSSSTTTTATTTCVSTNNN
SRSAWALSPGRPLPIVPKSPSSRKLKMDTSKDVSDSGGGRGGVTGVLKYFKQKKVSPILE
EDFHQYRLVNNRLIQWRFVNARVEASMAAIKRVAQKKMFNVWLRISIMRNFTAEKKIEVQ
KMKHDIKINKIMNSQNCLLREWQRLELKNSEAVGRVARKLSAISLCLPLVDGAEAKVMSI
YDAMISAEEVMDGIQDFIMNMQWQVEQSCYFLTQLIVILKQEEEFLEELESHLKTVNSLE
VEEETLRVHCIQLAKERMTRWEGEDQS*

Transcript Sequence

Transcript ID

Solyc05g051650.1.1
Transcript Infomation

QWRF motif protein (DUF566) (AHRD V3.3 *** AT4G25190.1)
Sequence

ATGGAGAAGGAGAAAAATCGCGATCATCGCAACAATATTATTCCTCGATCATCAGCTAAT
TCTCCGCGTTTACTTAGAAGTAAAAGTGGAATGTCACTCCCAGAAATTCCCACAATCGAC
TCTGTTCCACCAAAGCTAGTCAATCGGTCAAAATCGACCACAAAATTGCGATCTAATAGT
AGAGGAGAAGAAAATGTTAGCCCATTGAAGATGATCAAGAATAACAAAAAATTTCAAGAA
AAGGAAGATCATCATAATCATAGTACTTTTGCTAAATTCTTACAAAAACGCGATAATGGA
TCAAAATCATCATCAACAACAACAACAGCAACAACAACGTGTGTTAGTACAAATAATAAT
TCGCGATCTGCATGGGCATTGTCACCGGGACGTCCTTTACCTATAGTCCCTAAGTCACCT
AGCTCGAGAAAGTTGAAAATGGACACGTCCAAGGACGTTAGTGATAGTGGTGGTGGTCGT
GGTGGTGTTACTGGCGTTTTAAAGTATTTTAAACAGAAAAAAGTTTCGCCGATACTAGAA
GAAGATTTTCATCAATATCGTCTTGTGAATAATAGATTAATACAATGGAGATTTGTCAAT
GCTCGTGTTGAGGCTTCTATGGCTGCAATCAAGAGGGTTGCACAGAAGAAGATGTTCAAT
GTATGGTTAAGAATTTCAATTATGAGAAATTTCACAGCTGAGAAGAAAATTGAAGTCCAA
AAAATGAAGCATGATATAAAAATAAATAAGATAATGAACTCTCAAAATTGTTTACTTAGA
GAGTGGCAAAGATTAGAATTGAAAAATTCTGAAGCTGTTGGAAGGGTAGCAAGAAAATTA
TCAGCAATTTCTCTTTGTCTTCCACTTGTTGATGGAGCTGAGGCAAAAGTTATGTCAATT
TACGATGCTATGATCTCAGCAGAGGAAGTTATGGACGGTATCCAGGATTTTATTATGAAT
ATGCAATGGCAGGTTGAGCAGTCATGTTATTTCCTCACACAACTTATAGTAATTTTAAAG
CAGGAGGAAGAGTTCTTGGAGGAGCTAGAGAGTCATTTAAAAACAGTTAATTCATTAGAG
GTAGAAGAGGAAACCTTGAGAGTACATTGTATCCAATTGGCTAAGGAGAGGATGACAAGA
TGGGAAGGAGAAGATCAATCCTAA