Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g051580.3.1
CDS Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G10250.2)
Sequence	ATGCAGAAGTTGATTCTTGATGAGCAAGAGGGAACTAGTGATCATCCTGAGTCTAATGAA AGTCATCATCAAGTTCATGATGATCAACTAGTAGTTGTCCCAACTATGCTCAATGCAATT GCTGATGGCTTTGTCAAGAAAGAAAAGTCATGGTCTGCCACTTCTCAACTTCCAAGTGAT TTATCAATTCGAGTTGAAGACATCACCTTCTATATCCACAAGTATCCACTTATTGCAAGG TGTGGCTACATAAATCAAATTGAACTTCATGAGCCTCAAAATTCACATTTAGGATATGAC ATAAAGCTTGAAAAGTTTCCAGGTGGATCAGAAACTTTTGAGACAATTCTAAAATTCTGT TATGGCTTGCCAATAAGTCTAAATCCAGCAAATGTAGCAGCACTGAGATGTGGATCAGAG TATTTAGAAATGACAGAAGCAATGGAAGAAGGGAATTTGATCTCGAAAACGGAAGCTTTC TTCACATTTGTAGCCCTTTCGTCATGGAATGACACAATCGCGGTACTCAAATCATGTGAA AGACTATCACCATGGGCTGAAAATTTACAGATTGTGAGAAGGTGTTGTGACTCAATTGCC TGGAAGATATTTAGAGAGAATTCAACAGCAGGGGAAATCATAACGAACGAAGGAACTTGG TGGTTCGATGATGTTGCCACTCTCCGTATTGATTTCTTCATGAGGATCATTACAGCAGTG AGGGTAAAAGGGGTCAAACCTGAGATCATTGGTTCGTGTATTATGAACTACGGAGAGAAG TGTTTGCCTTGCATGTATGGCGATACGAGAGGAATGGATTGTAAAACTAGTACTAATAGA AGGAATGATTCGCAATGGAGCATCACGAGTGGGAGGATCGGGGAAACGAGCATTGGACAG AATAAGGAACAGAGAACAATTATAGAGAGCTTGATCAGTATATTACCTCCTCAGAAGGAA ACTGTTTCTTGCAAGTTTCTGTTAAGGTTGTTGAAGATTTCAATTGTGTATGCTGCATCA CCAGCTTTGATTTCCGAGCTCGAGAAAAGAATCGGGATGGTGCTCGAAAACGCCAGCACG AACGACCTCTTGATACCTACATATGCAGTAGGTGATCAAACAATCAATTCAAATGAAGAA CAAACTATCCATAACATAGATGTGGTGCAGAGGATTTTGGATTATTTTCTGATGTATGAA CAGCAAAAATTGCAGCAACAAGAACTGAAGTCGACGACATTGAATATCAGTAAACTGTTT GACAGCTACCTAGCAGAAATCGCGAGAGATCCCAACGTATCTATCACTAAGTTCCGAGTT TTAGCTGAATCATTGCCTCGACATGCTCGAACATGTCACGATGGACTCTACAGAGCGATT GATACATACCTTAAGACTCATCCTTCACTGTCTGAACATGATCGACGAAGGCTATGCAAG ATCATGGACTGCGGAAAATTGTCACTTGATGGATGCATGCACGCTGCACAAAACGAAAGG TTGCCTATGAGAATCATTATCCAGGTTTTGCTGTCAGAGCAAGTGAAGATGAGGGCTGCA GTACATGGTAAGGATATTACAGAGAGTGATGATAACTCAGACAAGGAAAACAGATGGTCA TCAACGAAGAACGAGGTCAAGTCCCTTAGAGAAGAACTCGAAAATGTGAAGATTCAAATG GCTGAGCTTCATAGGGACTACTCTGAGCTGCAACAAGAATACGAGAAGACGAACAACAAG CATAGAAGTCCGTGGACATCCGGATGGAGGAAGATGAAAAAGTCTGCACTTTTCATCAGA AAAATGATCGAGGATGAAACTCAAGAGGGAGAGCATAAAGTTAAACCAGGCCGAAGAACA CAATCCATATCTTAA

Peptide Sequence

PEP ID	Solyc05g051580.3.1
PEP Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G10250.2)
Sequence	MQKLILDEQEGTSDHPESNESHHQVHDDQLVVVPTMLNAIADGFVKKEKSWSATSQLPSD LSIRVEDITFYIHKYPLIARCGYINQIELHEPQNSHLGYDIKLEKFPGGSETFETILKFC YGLPISLNPANVAALRCGSEYLEMTEAMEEGNLISKTEAFFTFVALSSWNDTIAVLKSCE RLSPWAENLQIVRRCCDSIAWKIFRENSTAGEIITNEGTWWFDDVATLRIDFFMRIITAV RVKGVKPEIIGSCIMNYGEKCLPCMYGDTRGMDCKTSTNRRNDSQWSITSGRIGETSIGQ NKEQRTIIESLISILPPQKETVSCKFLLRLLKISIVYAASPALISELEKRIGMVLENAST NDLLIPTYAVGDQTINSNEEQTIHNIDVVQRILDYFLMYEQQKLQQQELKSTTLNISKLF DSYLAEIARDPNVSITKFRVLAESLPRHARTCHDGLYRAIDTYLKTHPSLSEHDRRRLCK IMDCGKLSLDGCMHAAQNERLPMRIIIQVLLSEQVKMRAAVHGKDITESDDNSDKENRWS STKNEVKSLREELENVKIQMAELHRDYSELQQEYEKTNNKHRSPWTSGWRKMKKSALFIR KMIEDETQEGEHKVKPGRRTQSIS*

Transcript Sequence

Transcript ID	Solyc05g051580.3.1
Transcript Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G10250.2)
Sequence	ATAGACTATACTGATAACTTAGACCACTAATTTACAATAAGCTCTAATGACATTCACACA TTTGGTCTCGTCACAATCTTTTTCCTTTTAGAACAAGTACAAGAAAACTATGTTTCTTTC TTATAATAGTGGTGGTCGGACCAGTTATTTGCATACCTACATCATTTGGTTAGAACAATT GAAGGGTATAAGGTGAACGAAGTAATTATCTTGATCATCAAATATTAAAGATCTCAAAAA TACTAAACACGAATATATATAATTATTTACTATAGCATATTAAATTAAAATTTAAATTCT AATATCTAGTGATATTCATCCAACGTTATTGATCATGAAATAACATTTCAAGAAAGCCAA GTGATTATTGTTTGACCTAAAACCTGAAAGTGTTCGTTAACTTGATTTCAGTTGATATCT ATACAAGTAAACACTTAAGCTATCATAAAGTTGAATCACGTGTCATACATAGCAAAACAC GTGAATATGGAAAATCACGTGAGATTTGCCAAGACATTATGATAGATTAAGTGTTATTTA TATACATTTTTAAATTAAACGATATTAATATCAGATATATCTAAATTAAATGACACGTTT ATTTATCATATATGTCATTATTGTTTCAACAAATAGAATCTCTCTTTTATTATAGCCACA AAATGATCACTTGGTCCAATAAATATTTACGTGGTATAATTTGAATTAGACCTGTCACAA GACAATATTCTTTTTTCTCTGGTCCTCCCAGATGTTACTCAATTGTCCCTAACTAAGAAC ACCAGGAAATTATATGACCCTATTAACATTAAATATAACCACCCACCAACTTAATTATAT TCTAGTTCTAGCCACAAACTCAATTCTCACATTTATTCAAAATTGTTCCCCCCTCCTAGT ACAAGTAAATTCTAACGTCTAAAGTCACTGAATTCAGAATAAATAAACGTCTGAATATTG AAATTGTACTTAACATATATTTTACTTGAAAAAATACGAATATTGTGGGTGGAGAAAAAA AAATGTCCATAGTTTTTCAAATTTATAAAAACCCCATCCCAACGTTTAATTAAATAATAT TTTCGAAGAATTAAAATTTCCTTGTCCAGATGGGCCTAGAGGAACGGAACACAAGGAGTT CATTCGGACCTCCTTTACCGTAAAATTTATTTATTTATTTTTTTGATTCCATTAATGAAA ATAATCCATATTATGATATTGCTAGTACTATTTCCATATTTATATAAAGTTGGAGCTGAA AGCAATAAATTCAGTTGAGCCCGCGAAATTCTCTTGCCTCTTACAAATTGTCATGGATTT TCTTTCATGACTTTTTGTATAGAGTAAAGGCAACTAACTCACAATGCAGAAGTTGATTCT TGATGAGCAAGAGGGAACTAGTGATCATCCTGAGTCTAATGAAAGTCATCATCAAGTTCA TGATGATCAACTAGTAGTTGTCCCAACTATGCTCAATGCAATTGCTGATGGCTTTGTCAA GAAAGAAAAGTCATGGTCTGCCACTTCTCAACTTCCAAGTGATTTATCAATTCGAGTTGA AGACATCACCTTCTATATCCACAAGTATCCACTTATTGCAAGGTGTGGCTACATAAATCA AATTGAACTTCATGAGCCTCAAAATTCACATTTAGGATATGACATAAAGCTTGAAAAGTT TCCAGGTGGATCAGAAACTTTTGAGACAATTCTAAAATTCTGTTATGGCTTGCCAATAAG TCTAAATCCAGCAAATGTAGCAGCACTGAGATGTGGATCAGAGTATTTAGAAATGACAGA AGCAATGGAAGAAGGGAATTTGATCTCGAAAACGGAAGCTTTCTTCACATTTGTAGCCCT TTCGTCATGGAATGACACAATCGCGGTACTCAAATCATGTGAAAGACTATCACCATGGGC TGAAAATTTACAGATTGTGAGAAGGTGTTGTGACTCAATTGCCTGGAAGATATTTAGAGA GAATTCAACAGCAGGGGAAATCATAACGAACGAAGGAACTTGGTGGTTCGATGATGTTGC CACTCTCCGTATTGATTTCTTCATGAGGATCATTACAGCAGTGAGGGTAAAAGGGGTCAA ACCTGAGATCATTGGTTCGTGTATTATGAACTACGGAGAGAAGTGTTTGCCTTGCATGTA TGGCGATACGAGAGGAATGGATTGTAAAACTAGTACTAATAGAAGGAATGATTCGCAATG GAGCATCACGAGTGGGAGGATCGGGGAAACGAGCATTGGACAGAATAAGGAACAGAGAAC AATTATAGAGAGCTTGATCAGTATATTACCTCCTCAGAAGGAAACTGTTTCTTGCAAGTT TCTGTTAAGGTTGTTGAAGATTTCAATTGTGTATGCTGCATCACCAGCTTTGATTTCCGA GCTCGAGAAAAGAATCGGGATGGTGCTCGAAAACGCCAGCACGAACGACCTCTTGATACC TACATATGCAGTAGGTGATCAAACAATCAATTCAAATGAAGAACAAACTATCCATAACAT AGATGTGGTGCAGAGGATTTTGGATTATTTTCTGATGTATGAACAGCAAAAATTGCAGCA ACAAGAACTGAAGTCGACGACATTGAATATCAGTAAACTGTTTGACAGCTACCTAGCAGA AATCGCGAGAGATCCCAACGTATCTATCACTAAGTTCCGAGTTTTAGCTGAATCATTGCC TCGACATGCTCGAACATGTCACGATGGACTCTACAGAGCGATTGATACATACCTTAAGAC TCATCCTTCACTGTCTGAACATGATCGACGAAGGCTATGCAAGATCATGGACTGCGGAAA ATTGTCACTTGATGGATGCATGCACGCTGCACAAAACGAAAGGTTGCCTATGAGAATCAT TATCCAGGTTTTGCTGTCAGAGCAAGTGAAGATGAGGGCTGCAGTACATGGTAAGGATAT TACAGAGAGTGATGATAACTCAGACAAGGAAAACAGATGGTCATCAACGAAGAACGAGGT CAAGTCCCTTAGAGAAGAACTCGAAAATGTGAAGATTCAAATGGCTGAGCTTCATAGGGA CTACTCTGAGCTGCAACAAGAATACGAGAAGACGAACAACAAGCATAGAAGTCCGTGGAC ATCCGGATGGAGGAAGATGAAAAAGTCTGCACTTTTCATCAGAAAAATGATCGAGGATGA AACTCAAGAGGGAGAGCATAAAGTTAAACCAGGCCGAAGAACACAATCCATATCTTAACT GCAAATTTTTTACTTGTTTTCATGTATCTGGTTGATGAACTGATTAAAGTACAACTCTAT ATGGCATATGTGGAGTTTGGATGCATATTGTAAGTTATCTATGTTGGTCGGACTTTTCAA AAGGCATAA