Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g051490.3.1
CDS Infomation

LMBR1-like membrane protein (AHRD V3.3 *** AT5G65290.1)
Sequence

ATGTGGGTGTTTTATCTGATCTCATTGCCTTTAACCCTAGGCATGGTGATTTGGACTCTA
AAGTACTTTTCTGGTCCAGAAGTGCCTCGTTACGTGTTCTTTACAGTTGGTTATACCTGG
TTTTGCTCTATCTCCATTATTATCCTTGTGCCTGCCGATATTTGGACGACAATAGTTGGG
AGTGATAATGGAGGCATATCATTCTTTTGGAGCTGGTCATACTGGAGTACATTCCTACTC
ACATGGCTCGTTGTTCCCCTCATTCAAGGTTTTGAAGATGCTGGAGACTTTACACTTGTA
GAGCGATTGAAGACTAGCATACACGCCAACTTGGTCTTCTATGCCATCTTGGGGCTAGTC
GGTCTTCTTGGACTTATTCTCCTCATTACTATGCGGAAAAGTTGGGATGGTAATGCACTG
GGTTTTGCGATGGCATGCTCAAATACTTTTGGACTTGTGACTGGTGCTTTTCTTCTTGGT
TTTGGTATGAGCGAAATTCCAAAGAGCATGTGGAAAAATGCCGATTGGACTACTCGTCAG
AAGGTTCTTTCTCATAAAATTGCAAAAATGGCTGTGAAGCTTGATGATGCCCATCAAGAA
TTATCAAATGCTATTGTGGTTGCTCAGGCTACATCAAAGCAGATGTCCAAGCGTGATCCT
TTGAGGCGTTATATGGATGTTATTGATAATATGTTAGTTCAAATGTTCAGGGAGGATCCA
TCTTTCAAACCACAAGGGGGTCAGTTGGGAGAAGATGACATGGATTATGATACAGATGAT
AAATCAATGGCAAAGCTTAGGCGTAATCTTCGTATAGCTCGAGAGGAGTACTATAGATAC
AAAAGTGAGTATTTGACATATGTAACAGAGGCTCTTGAACTGGAGGATACTATAAAGAAT
TATGAGCAGCGCAATGCAACTGGTTGGAAATTTGTTTCAACCTTGAGATCTGAAAGGGCT
GGAACATTGGGTTCCTTCTTTGACACAACAGAATTAATCTGGCGATGTGTCCTGAGGAAG
CAATTGGAGAAAGTCTCAGCTGTAATTCTTGGTTGCATGTCTGTTGCTATTCTATTAGCA
GAAGCAACTCTTTTGCCAAGGGGAGTCGATTTGTCTCTGTTTTCCATTCTAATAAAGTCT
GTTGGAGATCAAGAGGTTCTTGTTCAGGTGTTTGCTTTTCTGCCACTTATGTATATGTGT
GTCTGCACTTACTATTCGCTGTTCAAAGCTGGAATGTATATGTTTTACTCATTGACACCG
AGACAAACAAGTTCTGTGAGCTTGTTAATGATTTGCTCGATGATTGCCCGTTATGCACCT
CCAATTTCGTACAATTTCCTTAACCTTATCAGTCTAGGCGAAAACAAGAAAACCATTTTT
GAGAAGCGAATGGGAACTGTTGACAAGGCTGTTCCTTTCTTTGGTCAAGGATTCAACAAA
ATTTATCCACTTATTATGGTTTTATATACGTTGCTAGTGGCAAGCAATTTCTTTGATTGG
ATAATCAGATTTTTTGGGAACTGGAAGATATTTAGATTTCAGTCAGAGACAGATGATATG
GATGGTTTTGATCCATCAGGGTTACTGATCTTGCAGAAAGAACGAAGCTGGCTCGAACAA
GGACGCAAACTTGGTGAACATGTTTTGCCATTAGCAAGGAATTTCAACAATATGACAGTG
GATCTGGAGTCTGATGGCAATACTATACATACAAATGATTTTGAATCAAAGGCACTCATG
GAATCAAGAAAGGACCGAGGGAGTTCGTCAAGACCTTTGAAAGATGAGGCCCGTCGGTAT
TCAGGGAGCAAGGAAGCCATTAGCAGCAAATATGCTGCCTTGAGGGAACAGGGCAAGCTA
CCATCTCATGTGAAGCCAATGGAGGAGGATATAGGCTCTACTAAGGTCTCTTTACTTGAT
TCTGCCAGCTCTCAATCTGGCGGTGCAGTAGCAGCTCCATCAGGTTTGGCTGGTAGATGG
GCATCAATGAAATCAGGTTTCCAGAATTTCAAAACAAACATTGAAGCAAAAAGGTTAATT
CCACTACGCCAAGTTGGTGAATTTGTTCCTTTACGTCAAACTCAGGATACAAACGTTTCT
CGTGCCTCCTCATCCGTATCTCTTGATGAGATATTCCAGAAATTAAAACGGCCTGCTACT
GAGAGTGAAAATTACGGTGATGATGACGATCATGAGAGAAGGCCCAGGAGGTGA

Peptide Sequence

PEP ID

Solyc05g051490.3.1
PEP Infomation

LMBR1-like membrane protein (AHRD V3.3 *** AT5G65290.1)
Sequence

MWVFYLISLPLTLGMVIWTLKYFSGPEVPRYVFFTVGYTWFCSISIIILVPADIWTTIVG
SDNGGISFFWSWSYWSTFLLTWLVVPLIQGFEDAGDFTLVERLKTSIHANLVFYAILGLV
GLLGLILLITMRKSWDGNALGFAMACSNTFGLVTGAFLLGFGMSEIPKSMWKNADWTTRQ
KVLSHKIAKMAVKLDDAHQELSNAIVVAQATSKQMSKRDPLRRYMDVIDNMLVQMFREDP
SFKPQGGQLGEDDMDYDTDDKSMAKLRRNLRIAREEYYRYKSEYLTYVTEALELEDTIKN
YEQRNATGWKFVSTLRSERAGTLGSFFDTTELIWRCVLRKQLEKVSAVILGCMSVAILLA
EATLLPRGVDLSLFSILIKSVGDQEVLVQVFAFLPLMYMCVCTYYSLFKAGMYMFYSLTP
RQTSSVSLLMICSMIARYAPPISYNFLNLISLGENKKTIFEKRMGTVDKAVPFFGQGFNK
IYPLIMVLYTLLVASNFFDWIIRFFGNWKIFRFQSETDDMDGFDPSGLLILQKERSWLEQ
GRKLGEHVLPLARNFNNMTVDLESDGNTIHTNDFESKALMESRKDRGSSSRPLKDEARRY
SGSKEAISSKYAALREQGKLPSHVKPMEEDIGSTKVSLLDSASSQSGGAVAAPSGLAGRW
ASMKSGFQNFKTNIEAKRLIPLRQVGEFVPLRQTQDTNVSRASSSVSLDEIFQKLKRPAT
ESENYGDDDDHERRPRR*

Transcript Sequence

Transcript ID

Solyc05g051490.3.1
Transcript Infomation

LMBR1-like membrane protein (AHRD V3.3 *** AT5G65290.1)
Sequence

AGTAGTCTCAATAGGATACTCCCAAATTGTGCTTTGTGAATCTACAAAGCACTAAAAACC
AAATCCAACATCTGCCAAAAATTTGTTCAAGAAAACGCGCACGTCACACCGCGCTCACGT
TAGAAAAACTTAAACAAAACGTAAAGAAAAGTCAATTGGTGCACGTTAGATAGTACCGCT
TTACTTCTTCGCTAAATTAGAAATCGCAGACGATCGGAAGGAGAAGAAATACAGAAACTC
GTGGTCGCCGTCACGATCACTTCCTTCTGATCGTCTCCGATCACTTTTCCGACCAGTTCA
TACCAATTCTGATTCATTATACAGAATCTGTATTAGAAAAACGTAAAAATGTGGGTGTTT
TATCTGATCTCATTGCCTTTAACCCTAGGCATGGTGATTTGGACTCTAAAGTACTTTTCT
GGTCCAGAAGTGCCTCGTTACGTGTTCTTTACAGTTGGTTATACCTGGTTTTGCTCTATC
TCCATTATTATCCTTGTGCCTGCCGATATTTGGACGACAATAGTTGGGAGTGATAATGGA
GGCATATCATTCTTTTGGAGCTGGTCATACTGGAGTACATTCCTACTCACATGGCTCGTT
GTTCCCCTCATTCAAGGTTTTGAAGATGCTGGAGACTTTACACTTGTAGAGCGATTGAAG
ACTAGCATACACGCCAACTTGGTCTTCTATGCCATCTTGGGGCTAGTCGGTCTTCTTGGA
CTTATTCTCCTCATTACTATGCGGAAAAGTTGGGATGGTAATGCACTGGGTTTTGCGATG
GCATGCTCAAATACTTTTGGACTTGTGACTGGTGCTTTTCTTCTTGGTTTTGGTATGAGC
GAAATTCCAAAGAGCATGTGGAAAAATGCCGATTGGACTACTCGTCAGAAGGTTCTTTCT
CATAAAATTGCAAAAATGGCTGTGAAGCTTGATGATGCCCATCAAGAATTATCAAATGCT
ATTGTGGTTGCTCAGGCTACATCAAAGCAGATGTCCAAGCGTGATCCTTTGAGGCGTTAT
ATGGATGTTATTGATAATATGTTAGTTCAAATGTTCAGGGAGGATCCATCTTTCAAACCA
CAAGGGGGTCAGTTGGGAGAAGATGACATGGATTATGATACAGATGATAAATCAATGGCA
AAGCTTAGGCGTAATCTTCGTATAGCTCGAGAGGAGTACTATAGATACAAAAGTGAGTAT
TTGACATATGTAACAGAGGCTCTTGAACTGGAGGATACTATAAAGAATTATGAGCAGCGC
AATGCAACTGGTTGGAAATTTGTTTCAACCTTGAGATCTGAAAGGGCTGGAACATTGGGT
TCCTTCTTTGACACAACAGAATTAATCTGGCGATGTGTCCTGAGGAAGCAATTGGAGAAA
GTCTCAGCTGTAATTCTTGGTTGCATGTCTGTTGCTATTCTATTAGCAGAAGCAACTCTT
TTGCCAAGGGGAGTCGATTTGTCTCTGTTTTCCATTCTAATAAAGTCTGTTGGAGATCAA
GAGGTTCTTGTTCAGGTGTTTGCTTTTCTGCCACTTATGTATATGTGTGTCTGCACTTAC
TATTCGCTGTTCAAAGCTGGAATGTATATGTTTTACTCATTGACACCGAGACAAACAAGT
TCTGTGAGCTTGTTAATGATTTGCTCGATGATTGCCCGTTATGCACCTCCAATTTCGTAC
AATTTCCTTAACCTTATCAGTCTAGGCGAAAACAAGAAAACCATTTTTGAGAAGCGAATG
GGAACTGTTGACAAGGCTGTTCCTTTCTTTGGTCAAGGATTCAACAAAATTTATCCACTT
ATTATGGTTTTATATACGTTGCTAGTGGCAAGCAATTTCTTTGATTGGATAATCAGATTT
TTTGGGAACTGGAAGATATTTAGATTTCAGTCAGAGACAGATGATATGGATGGTTTTGAT
CCATCAGGGTTACTGATCTTGCAGAAAGAACGAAGCTGGCTCGAACAAGGACGCAAACTT
GGTGAACATGTTTTGCCATTAGCAAGGAATTTCAACAATATGACAGTGGATCTGGAGTCT
GATGGCAATACTATACATACAAATGATTTTGAATCAAAGGCACTCATGGAATCAAGAAAG
GACCGAGGGAGTTCGTCAAGACCTTTGAAAGATGAGGCCCGTCGGTATTCAGGGAGCAAG
GAAGCCATTAGCAGCAAATATGCTGCCTTGAGGGAACAGGGCAAGCTACCATCTCATGTG
AAGCCAATGGAGGAGGATATAGGCTCTACTAAGGTCTCTTTACTTGATTCTGCCAGCTCT
CAATCTGGCGGTGCAGTAGCAGCTCCATCAGGTTTGGCTGGTAGATGGGCATCAATGAAA
TCAGGTTTCCAGAATTTCAAAACAAACATTGAAGCAAAAAGGTTAATTCCACTACGCCAA
GTTGGTGAATTTGTTCCTTTACGTCAAACTCAGGATACAAACGTTTCTCGTGCCTCCTCA
TCCGTATCTCTTGATGAGATATTCCAGAAATTAAAACGGCCTGCTACTGAGAGTGAAAAT
TACGGTGATGATGACGATCATGAGAGAAGGCCCAGGAGGTGATACTGTAAATTGCTTTCT
ATTAGAATGGAATATACTTGTCGATAACTGTAGAAATCAGGAAGAAAAGAGCCAAGAAGG
TGTACAGGTCTCTGAAAAAGTATCAGCCGTGTTTACTCATTCTTTACAGCTGACCTTCGG
TGTAGTTGAAGGGCTGTGTATGCAAAGATAAGGGCCAAGCAACTGGTCAGGAAGTTATGG
CAGAAGTTTAGGTCATAGGAAAGTTGAAATACAAACTCAATCCACATTGATGAAGAGAAA
TCCTGTAGGTCAGTGAATTCGGTTTATATAAGTCGATTCTTGTATAACTCATGTACTGCT
AATTTTTATGTCGGGGTGCCGATTACATAATCCATTAGAATGATTATAAAAAATTTTGGT
CTGTCACATTGATTACTGATTGAAAAGGTAAGATATAAAATCCATGGATTCTTCCTAAAG
CATGAAAATACCTGCTTTGAATTTCAGTCACAGCTTGATGAGGTTTTGTAAAAACTTTTT
ATAGAGGACATATCCGATGAGAATTATATGATGTGAAGTTCTTTTTCTATACTTATGTGC
ATTATTGAATTTAGTGGATGAAAGTCAACGAG