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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g051450.2.1
CDS Infomation

Phage capsid scaffolding protein (GPO) serine peptidase (AHRD V3.3 *-* G7KAI6_MEDTR)
Sequence

ATGTCCACTAAAATTACTTATGTAGATCCATTTTACAATCTCTCTTACAATCAAATTATT
TCTAAAAAATCCAACTCTTTATATTCAAGAAGATCATATATTCATTTTAACAAGATCAAT
AAACCTCTCAATTTCCTCATTTCCAATGCAAAAATTGGAATATTCATTGTTAGGTGCAAT
TCAGCCAATAGTATTGGATCTGATGCTTCACCTCCTGGAAACTCTTCATCTTTAGGATGG
AAAAAATGGTTGTTGGGATTTCTTCTTCCTATGTTACTACCTGCATTCAAGAACAAAGTC
AGCCCTTTACAACTACTCAAAAGTAATGTGGATAAAGCAATAGAAACAGTGGAAACTATG
AGTGAGATAGTGGAAGAGGTAGCTGAGGAAGTAGAAAAGATTGCTGAAGAAGTTGAAAAG
AAACTTCCTGGGGATTCTAAGCTAAAAGAAAGTCTTGATTCAATAGAAAATTTAGCTCAA
GGGGCTGTCAAATATGCCAACCAAGCTCAAGATCTCATTCACAAGGTCAGTATCGAGACG
AATTCAGAATTTCAAGTTTATACTTTTTATAATAATTTATATCAATTGATAACTAACTTC
AAATTTTAA

Peptide Sequence

PEP ID

Solyc05g051450.2.1
PEP Infomation

Phage capsid scaffolding protein (GPO) serine peptidase (AHRD V3.3 *-* G7KAI6_MEDTR)
Sequence

MSTKITYVDPFYNLSYNQIISKKSNSLYSRRSYIHFNKINKPLNFLISNAKIGIFIVRCN
SANSIGSDASPPGNSSSLGWKKWLLGFLLPMLLPAFKNKVSPLQLLKSNVDKAIETVETM
SEIVEEVAEEVEKIAEEVEKKLPGDSKLKESLDSIENLAQGAVKYANQAQDLIHKVSIET
NSEFQVYTFYNNLYQLITNFKF*

Transcript Sequence

Transcript ID

Solyc05g051450.2.1
Transcript Infomation

Phage capsid scaffolding protein (GPO) serine peptidase (AHRD V3.3 *-* G7KAI6_MEDTR)
Sequence

CAGCTCAAAATATTATACCCAACAAATCTTTTAAGTTGGTATCATGATTATGAAATTTAA
TAATCTCCTCTTGTAAAACACTTCCATTTGACCTGATTATTCTAATACTTATGATAAAAA
CATGACCTACTTAAATTATAATTTATTTATCCTACATGATTACATCCACTATATTAAAAC
CAAGGCTCCCCATACATGTATATTTCTTCTACTTGTAAAAAGAAAATAATTTCATTTTGA
TCTAAAGTTTTAAAATCAATCCAAAATGTCCACTAAAATTACTTATGTAGATCCATTTTA
CAATCTCTCTTACAATCAAATTATTTCTAAAAAATCCAACTCTTTATATTCAAGAAGATC
ATATATTCATTTTAACAAGATCAATAAACCTCTCAATTTCCTCATTTCCAATGCAAAAAT
TGGAATATTCATTGTTAGGTGCAATTCAGCCAATAGTATTGGATCTGATGCTTCACCTCC
TGGAAACTCTTCATCTTTAGGATGGAAAAAATGGTTGTTGGGATTTCTTCTTCCTATGTT
ACTACCTGCATTCAAGAACAAAGTCAGCCCTTTACAACTACTCAAAAGTAATGTGGATAA
AGCAATAGAAACAGTGGAAACTATGAGTGAGATAGTGGAAGAGGTAGCTGAGGAAGTAGA
AAAGATTGCTGAAGAAGTTGAAAAGAAACTTCCTGGGGATTCTAAGCTAAAAGAAAGTCT
TGATTCAATAGAAAATTTAGCTCAAGGGGCTGTCAAATATGCCAACCAAGCTCAAGATCT
CATTCACAAGGTCAGTATCGAGACGAATTCAGAATTTCAAGTTTATACTTTTTATAATAA
TTTATATCAATTGATAACTAACTTCAAATTTTAATATTTAATGAATATTTCATACACTGT
TCTCTAGATCCACAATTCCTATCCTATAATTCCCTTTTAGAATTTTTGCACTAAGATGAA
TTTAGAGAGGCATTGCATGAAGAGACACTTCACATTTTACTATATCAAAAATACTTTTTT
GCTCAATAAATTAATAGCAA