Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g050860.1.1
CDS Infomation

LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9IBW5_POPTR)
Sequence

ATGGCTTGTATAGATCAAGAACAACAACAACAACAACCAATTTATAAGCATTATTGTAGA
GTTTGCAAGAAAGGTTTTGTGTGTGGAAGAGCTTTAGGTGGACATATGAGAGCTCATGGA
ATTGGAGATGAAGGTGCAAACATAGATGATGATGATCCAGCTAGTGATTGGGAAGATAAG
TTTGGAGGGGGTGTTAAGGGAGGTAATAAGAGGTTATATCAATTAAGAACAAACCCTAAT
AGACAAAAAAGCAATAGAGTTTGTGAGAATTGTGGGAAAGAATTCTCATCTTGGAAATCA
TTTCTTGAACATGGAAAATGTAGCTCAGAAGACGCGGAATCCCTAGTGTCCTCGCCCTGT
TTAGAGGGCGAGGACTACATTAATAATGGTGGAAGAAAAGGCTATGGATGGTCTAAAAGG
AAAAGGTCATTAAGAACAAAAATTGGAACCATTAATAGTACTACTTCAACTTATCCATCA
AGTGAAGATGAAGATCTTGTCCTTGCAAAATGTCTTATTGATTTAGCCAACGCGAAGGTT
GACCTATCGTTGGTTGAGCCTGAGGAGTCGTGTGCCTCGGCTAGCAAGGAGGAGGAGAGA
GCTAGAAACCCCATGAACTATCTAACACCATTAGTGAGACCCTTTGACAACAAGGCTAAA
GGGATTTCTAATAAAGGATTGTTTGAATGTAAAGCATGCAAGAAAGTCTTTAACTCTCAT
CAAGCCCTAGGTGGACATAGGGCAAGTCACAAAAAGGTTAAAGGATGTTATGCAGCCAAA
CAAGATCAACTAGATGATAGTTTAATTGATGATAATGATATGAATATCACACAAGATGAT
CAATTCACATTACAAGGTTCAAAATCCATGAGGAAATCAAAAATCCATGAATGTTCAATA
TGTCATAGAGTTTTCTCCACAGGACAAGCTTTAGGTGGGCATAAAAGGTGCCATTGGATA
ACCTCTAATTCCCCAGATTCAACATCCAAATTTAATTTCAATGGACATATGGATCAAATA
AATCTAAGATCAAACTTGAGAAAATCAAGTGATACATTAGATCTCAACATTCCAATATCA
CACGATGACATGTCGCGAATTAGACGAGACCCTATGAATCCATTGAGCTTTGAGGTTTCA
ACAGAAATTCATTTGCATCCATGGAGTAGTAATCCTAATGAAGCAAAAGAACATAGTTGT
AGTGAAAACTACTACCTTGATGAAACCATAAATAACAACAACAACAACAACAACAATAAT
AATAATAATGAAAACAACAACATTATAAATGGTACAATACAAAATGTAGAAGATGATGAA
GCAGATAGTAAATTGAAATTAGCTAAGCTAAGTGAATTAAAGGATATGAATAAAAATTCT
GAAAATCCCTCTCATTGGTTACAAGTTGGAATTGGCCCAACTACACAAGTTGGGGCTGAC
CCATAA

Peptide Sequence

PEP ID

Solyc05g050860.1.1
PEP Infomation

LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9IBW5_POPTR)
Sequence

MACIDQEQQQQQPIYKHYCRVCKKGFVCGRALGGHMRAHGIGDEGANIDDDDPASDWEDK
FGGGVKGGNKRLYQLRTNPNRQKSNRVCENCGKEFSSWKSFLEHGKCSSEDAESLVSSPC
LEGEDYINNGGRKGYGWSKRKRSLRTKIGTINSTTSTYPSSEDEDLVLAKCLIDLANAKV
DLSLVEPEESCASASKEEERARNPMNYLTPLVRPFDNKAKGISNKGLFECKACKKVFNSH
QALGGHRASHKKVKGCYAAKQDQLDDSLIDDNDMNITQDDQFTLQGSKSMRKSKIHECSI
CHRVFSTGQALGGHKRCHWITSNSPDSTSKFNFNGHMDQINLRSNLRKSSDTLDLNIPIS
HDDMSRIRRDPMNPLSFEVSTEIHLHPWSSNPNEAKEHSCSENYYLDETINNNNNNNNNN
NNNENNNIINGTIQNVEDDEADSKLKLAKLSELKDMNKNSENPSHWLQVGIGPTTQVGAD
P*

Transcript Sequence

Transcript ID

Solyc05g050860.1.1
Transcript Infomation

LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9IBW5_POPTR)
Sequence

ATGGCTTGTATAGATCAAGAACAACAACAACAACAACCAATTTATAAGCATTATTGTAGA
GTTTGCAAGAAAGGTTTTGTGTGTGGAAGAGCTTTAGGTGGACATATGAGAGCTCATGGA
ATTGGAGATGAAGGTGCAAACATAGATGATGATGATCCAGCTAGTGATTGGGAAGATAAG
TTTGGAGGGGGTGTTAAGGGAGGTAATAAGAGGTTATATCAATTAAGAACAAACCCTAAT
AGACAAAAAAGCAATAGAGTTTGTGAGAATTGTGGGAAAGAATTCTCATCTTGGAAATCA
TTTCTTGAACATGGAAAATGTAGCTCAGAAGACGCGGAATCCCTAGTGTCCTCGCCCTGT
TTAGAGGGCGAGGACTACATTAATAATGGTGGAAGAAAAGGCTATGGATGGTCTAAAAGG
AAAAGGTCATTAAGAACAAAAATTGGAACCATTAATAGTACTACTTCAACTTATCCATCA
AGTGAAGATGAAGATCTTGTCCTTGCAAAATGTCTTATTGATTTAGCCAACGCGAAGGTT
GACCTATCGTTGGTTGAGCCTGAGGAGTCGTGTGCCTCGGCTAGCAAGGAGGAGGAGAGA
GCTAGAAACCCCATGAACTATCTAACACCATTAGTGAGACCCTTTGACAACAAGGCTAAA
GGGATTTCTAATAAAGGATTGTTTGAATGTAAAGCATGCAAGAAAGTCTTTAACTCTCAT
CAAGCCCTAGGTGGACATAGGGCAAGTCACAAAAAGGTTAAAGGATGTTATGCAGCCAAA
CAAGATCAACTAGATGATAGTTTAATTGATGATAATGATATGAATATCACACAAGATGAT
CAATTCACATTACAAGGTTCAAAATCCATGAGGAAATCAAAAATCCATGAATGTTCAATA
TGTCATAGAGTTTTCTCCACAGGACAAGCTTTAGGTGGGCATAAAAGGTGCCATTGGATA
ACCTCTAATTCCCCAGATTCAACATCCAAATTTAATTTCAATGGACATATGGATCAAATA
AATCTAAGATCAAACTTGAGAAAATCAAGTGATACATTAGATCTCAACATTCCAATATCA
CACGATGACATGTCGCGAATTAGACGAGACCCTATGAATCCATTGAGCTTTGAGGTTTCA
ACAGAAATTCATTTGCATCCATGGAGTAGTAATCCTAATGAAGCAAAAGAACATAGTTGT
AGTGAAAACTACTACCTTGATGAAACCATAAATAACAACAACAACAACAACAACAATAAT
AATAATAATGAAAACAACAACATTATAAATGGTACAATACAAAATGTAGAAGATGATGAA
GCAGATAGTAAATTGAAATTAGCTAAGCTAAGTGAATTAAAGGATATGAATAAAAATTCT
GAAAATCCCTCTCATTGGTTACAAGTTGGAATTGGCCCAACTACACAAGTTGGGGCTGAC
CCATAA