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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g050700.1.1
CDS Infomation

LOW QUALITY:Leucine-rich repeat protein (AHRD V3.3 *** A0A0A6ZKK7_PETHY)
Sequence

ATGGCCAGATTAGTTAACTCCATTTTCTTTACCTTCCTGTACATAAGTTTGATATACACA
CTTTCACCTTTTGTCAATGCAACAACTTCACAATCTGATATTCAAGTTCTAGTAGCCATC
AAAACGTTGATAGACCCTTTTTCAATAACCGCGGATTCCTTCCTTAATAGCTGGGATTTC
AACGTAGACCCTTGTGAGACAACTGGTGCAAGTTTCTTAGGCATTCTTTGCACAGTTCCT
GATCAAGTAGACACTAATGCCACGAGCCGGATAATGGAGATTGATCTAGAAGGCGATGGA
CTAGAGGGGTTCTTGACATCGTCTATCGGGAACTTAACTGAACTTGTTACTCTCAATCTA
GGTAGGAACAAGTTCAGAGGACCAGTACCAGAGAGTATAACTAATTTGAGGAAACTCACA
AGTCTTCAACTTTATGAGAATTTTTTCTCAGGTAGTCTTGTTGATGACATTGGTGTCCTT
TCAAAACTCGAAAATCTTGATGTCTCAAATAACAGACTCTCTGGTTCAATCCCTTCCTCC
ATTATGTCACTTAGAAGTTTAACGCGATTAGACCTGTCTAACAATGAATTCACCGGAAAA
ATTCCTCAACTCAACGGATTATGGCAACTCTCTTCATTTGACATTTCAAATAACCAAATT
TATGGGAATTTACCACAATTCCCATTGAAGATCAAAACAATATCACTAAGCCACAATCTG
TTATCAGGACACATTACCCCAGTGCATAAACTTAGACATTTAAACACATTAGACCTTAGT
GATAACAGATTTTCAGGAGGCATAAACAAAGGGATCTTCAGGTTAACTGAATTAAGTCAC
GTAAACGTTTCAGTAAACCGTTTCACAGTGTTTGAGGTGGTAGAGTTCTCTGATAAAAAA
TCACAGCTACACACGTTAGACGTACATGCTAATCGTCTACATGGTCATTTACCTGTGAAC
CTTGTTACTTACCCAAACTTAACAGAAATAAACCTTGGACATAACCTGTTTTCGGGTGAG
ATTCCATCAGAGTATTGGTCAAGACTCCGATTTTCATGGAGAAGTCTTAACTTGGAATAT
AATAACCTGGAGGGATCGGTGCCTCGTGAGCTCAACAGGACTTCAGAAGGGGTTCAGGGA
AATTTTGGACACAACTGTCTAATTTGTCCAAAGGGATTGCAGCTATGTAATGGACAGAGG
ACAGCTTCAGAATGTCATGGAGGAGACCTTAATTAG

Peptide Sequence

PEP ID

Solyc05g050700.1.1
PEP Infomation

LOW QUALITY:Leucine-rich repeat protein (AHRD V3.3 *** A0A0A6ZKK7_PETHY)
Sequence

MARLVNSIFFTFLYISLIYTLSPFVNATTSQSDIQVLVAIKTLIDPFSITADSFLNSWDF
NVDPCETTGASFLGILCTVPDQVDTNATSRIMEIDLEGDGLEGFLTSSIGNLTELVTLNL
GRNKFRGPVPESITNLRKLTSLQLYENFFSGSLVDDIGVLSKLENLDVSNNRLSGSIPSS
IMSLRSLTRLDLSNNEFTGKIPQLNGLWQLSSFDISNNQIYGNLPQFPLKIKTISLSHNL
LSGHITPVHKLRHLNTLDLSDNRFSGGINKGIFRLTELSHVNVSVNRFTVFEVVEFSDKK
SQLHTLDVHANRLHGHLPVNLVTYPNLTEINLGHNLFSGEIPSEYWSRLRFSWRSLNLEY
NNLEGSVPRELNRTSEGVQGNFGHNCLICPKGLQLCNGQRTASECHGGDLN*

Transcript Sequence

Transcript ID

Solyc05g050700.1.1
Transcript Infomation

LOW QUALITY:Leucine-rich repeat protein (AHRD V3.3 *** A0A0A6ZKK7_PETHY)
Sequence

ATGGCCAGATTAGTTAACTCCATTTTCTTTACCTTCCTGTACATAAGTTTGATATACACA
CTTTCACCTTTTGTCAATGCAACAACTTCACAATCTGATATTCAAGTTCTAGTAGCCATC
AAAACGTTGATAGACCCTTTTTCAATAACCGCGGATTCCTTCCTTAATAGCTGGGATTTC
AACGTAGACCCTTGTGAGACAACTGGTGCAAGTTTCTTAGGCATTCTTTGCACAGTTCCT
GATCAAGTAGACACTAATGCCACGAGCCGGATAATGGAGATTGATCTAGAAGGCGATGGA
CTAGAGGGGTTCTTGACATCGTCTATCGGGAACTTAACTGAACTTGTTACTCTCAATCTA
GGTAGGAACAAGTTCAGAGGACCAGTACCAGAGAGTATAACTAATTTGAGGAAACTCACA
AGTCTTCAACTTTATGAGAATTTTTTCTCAGGTAGTCTTGTTGATGACATTGGTGTCCTT
TCAAAACTCGAAAATCTTGATGTCTCAAATAACAGACTCTCTGGTTCAATCCCTTCCTCC
ATTATGTCACTTAGAAGTTTAACGCGATTAGACCTGTCTAACAATGAATTCACCGGAAAA
ATTCCTCAACTCAACGGATTATGGCAACTCTCTTCATTTGACATTTCAAATAACCAAATT
TATGGGAATTTACCACAATTCCCATTGAAGATCAAAACAATATCACTAAGCCACAATCTG
TTATCAGGACACATTACCCCAGTGCATAAACTTAGACATTTAAACACATTAGACCTTAGT
GATAACAGATTTTCAGGAGGCATAAACAAAGGGATCTTCAGGTTAACTGAATTAAGTCAC
GTAAACGTTTCAGTAAACCGTTTCACAGTGTTTGAGGTGGTAGAGTTCTCTGATAAAAAA
TCACAGCTACACACGTTAGACGTACATGCTAATCGTCTACATGGTCATTTACCTGTGAAC
CTTGTTACTTACCCAAACTTAACAGAAATAAACCTTGGACATAACCTGTTTTCGGGTGAG
ATTCCATCAGAGTATTGGTCAAGACTCCGATTTTCATGGAGAAGTCTTAACTTGGAATAT
AATAACCTGGAGGGATCGGTGCCTCGTGAGCTCAACAGGACTTCAGAAGGGGTTCAGGGA
AATTTTGGACACAACTGTCTAATTTGTCCAAAGGGATTGCAGCTATGTAATGGACAGAGG
ACAGCTTCAGAATGTCATGGAGGAGACCTTAATTAG