Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g050600.3.1
CDS Infomation

dynamin-like protein (AHRD V3.3 *** AT5G42080.4)
Sequence

ATGGAGAATCTCATAGCATTAGTTAACAGATTACAGAGAGCTTGTACTGCACTTGGAGAT
CATGGTGAGGAAAGTTCGTTACCTACTCTATGGGATGCTTTGCCTACTATCGCTGTTGTC
GGTGGACAGAGTTCTGGGAAATCTTCGGTGCTTGAGAGCATTGTTGGAAAAGACTTTTTG
CCTCGTGGATCAGGAATTGTCACCCGCCGCCCCCTTGTCCTACAGCTTCATCGGATAGAA
GAAGGTAGAGAATATGCAGAATTTGGACACCTACCAAGAAAGAGGTTTACTGATTTTGCT
GCTGTGAGGAAGGAGATTGCTGATGAGACTGATCGAGAAACTGGCCGCAGCAAACAGATT
TCTAGTGTGCCAATTTATCTCAGTATATATTCTCCAAATGTTGTTAACTTGACTCTGATC
GATCTTCCTGGGCTTACAAAAGTAGCAGTTGAGGGGCAGCCTGACAGCATTGTATTGGAC
ATCGAAAACATGGTTCGGTCTTATATTGAGAAGCCCAATTGTATTATTCTTGCAATTTCC
CCTGCGAATCAAGATCTCGCAACATCGGATGCAATCAAGATTTCTCGTGAAGTAGACCCT
AAAGGAGAAAGGACATTTGGAGTTCTGACGAAGATTGATCTCATGGATAAGGGTACCGAT
GCTGTTGATATGTTGGAAGGAAAATCATATAAGCTACAGTTTCCATGGATTGGTGTTGTC
AATCGTTCACAAGCTGATATCAACAAAAATGTGGATATGATTGCTGCTAGGCGTAGGGAG
AGAGAGTACTTTTCTAGTACCCCTGAGTACCGGCATCTTGCTAACAGAATGGGTTCAGAA
CATCTTGGGAAAGTTCTGTCAAAACATTTGGAGTCTGTTATCAAGTCTCGGATTCCAGGT
CTCCAGTCTCTTATCAACAAAACTATAATTGAGCTAGAAACTGAGTTGAGCCGTCTTGGA
AAGCCCATTGCCACGGATGCGGGAGGAAAATTGTACATGATAATGGAAATCTGTCGTAGT
TTTGATGGAAATTTCAAAGAACATCTTGATGGAGTTCGACCAGGAGGTGATAAAATATAT
TATGTCTTTGATAATCAGCTCCCAGCTGCATTAAAAAGACTGCAATTTGACAAGCAACTT
TCAATGGAAAATGTAAGGAAACTTATAACTGAAGCGGATGGATATCAACCACATTTGATA
GCTCCTGAACAAGGATACCGTCGTCTCATTGAATCTTCCATAGTTTCTATGAAGGGTCCT
GCTGAAGCAGCTGTTGATGCGGTTCATGCTATACTGAAGGAACTGATTCACAAGGCAATC
AGTGAGACTGCGGAGCTAAAGCAGTACCCCTCCCTACGAGTAGAGGTCAGCAATGCAGCT
GTTGAATCACTAGAAAGGATGAGGGATGAAAGCAAAAAAGCAACTCTTCAGCTGGTTGAA
ATGGAGTGTAGTTACCTGACCGTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAG
GGAGGGAATCCGACACATTCTATTTTTGACCGTTATAATGATTCCTATCTTCGAAGGATA
GGGTCAAATGTCTTGTCTTATGTCAATATGGTTTGTGCAACTTTGAGGAATTCAATTCCG
AAGTCTGTAGTTTATGGTCAAGTACGGGAGGCCAAACGCAGCTTGCTTGATCATTTCTTC
ACTGATTTAGGCAAGAAGGAGGGGAAACAGCTAGGTACTTTGTTGGATGAGGATCCAGCA
ATTATGCAGCGTCGTCTCTCTCTGGCAAAGAGACTTGAGTTATACAGAGCTGCTCAAGCT
GAGATTGATTCAGTAGCATGGTCTAAGTAA

Peptide Sequence

PEP ID

Solyc05g050600.3.1
PEP Infomation

dynamin-like protein (AHRD V3.3 *** AT5G42080.4)
Sequence

MENLIALVNRLQRACTALGDHGEESSLPTLWDALPTIAVVGGQSSGKSSVLESIVGKDFL
PRGSGIVTRRPLVLQLHRIEEGREYAEFGHLPRKRFTDFAAVRKEIADETDRETGRSKQI
SSVPIYLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVLDIENMVRSYIEKPNCIILAIS
PANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVDMLEGKSYKLQFPWIGVV
NRSQADINKNVDMIAARRREREYFSSTPEYRHLANRMGSEHLGKVLSKHLESVIKSRIPG
LQSLINKTIIELETELSRLGKPIATDAGGKLYMIMEICRSFDGNFKEHLDGVRPGGDKIY
YVFDNQLPAALKRLQFDKQLSMENVRKLITEADGYQPHLIAPEQGYRRLIESSIVSMKGP
AEAAVDAVHAILKELIHKAISETAELKQYPSLRVEVSNAAVESLERMRDESKKATLQLVE
MECSYLTVDFFRKLPQDIEKGGNPTHSIFDRYNDSYLRRIGSNVLSYVNMVCATLRNSIP
KSVVYGQVREAKRSLLDHFFTDLGKKEGKQLGTLLDEDPAIMQRRLSLAKRLELYRAAQA
EIDSVAWSK*

Transcript Sequence

Transcript ID

Solyc05g050600.3.1
Transcript Infomation

dynamin-like protein (AHRD V3.3 *** AT5G42080.4)
Sequence

AAAACACAAATATATTAATTAAGACTGAAAAAGGGTCTGGGTATTTTCTTCAAGCAGTTC
TCCATTCAAAAAGCTTTCTAATTTCAAAATCTTAGCTCTCTCTCACACACACACAAATTG
CGAAAAGCCTCTTTTCTTCTTCTCTCCAATATCTCTTCATCTTCTTACACTTGTTGACTA
TCAAGTCGCCGGATCTTTGACTCCGATTGAAATGGAGAATCTCATAGCATTAGTTAACAG
ATTACAGAGAGCTTGTACTGCACTTGGAGATCATGGTGAGGAAAGTTCGTTACCTACTCT
ATGGGATGCTTTGCCTACTATCGCTGTTGTCGGTGGACAGAGTTCTGGGAAATCTTCGGT
GCTTGAGAGCATTGTTGGAAAAGACTTTTTGCCTCGTGGATCAGGAATTGTCACCCGCCG
CCCCCTTGTCCTACAGCTTCATCGGATAGAAGAAGGTAGAGAATATGCAGAATTTGGACA
CCTACCAAGAAAGAGGTTTACTGATTTTGCTGCTGTGAGGAAGGAGATTGCTGATGAGAC
TGATCGAGAAACTGGCCGCAGCAAACAGATTTCTAGTGTGCCAATTTATCTCAGTATATA
TTCTCCAAATGTTGTTAACTTGACTCTGATCGATCTTCCTGGGCTTACAAAAGTAGCAGT
TGAGGGGCAGCCTGACAGCATTGTATTGGACATCGAAAACATGGTTCGGTCTTATATTGA
GAAGCCCAATTGTATTATTCTTGCAATTTCCCCTGCGAATCAAGATCTCGCAACATCGGA
TGCAATCAAGATTTCTCGTGAAGTAGACCCTAAAGGAGAAAGGACATTTGGAGTTCTGAC
GAAGATTGATCTCATGGATAAGGGTACCGATGCTGTTGATATGTTGGAAGGAAAATCATA
TAAGCTACAGTTTCCATGGATTGGTGTTGTCAATCGTTCACAAGCTGATATCAACAAAAA
TGTGGATATGATTGCTGCTAGGCGTAGGGAGAGAGAGTACTTTTCTAGTACCCCTGAGTA
CCGGCATCTTGCTAACAGAATGGGTTCAGAACATCTTGGGAAAGTTCTGTCAAAACATTT
GGAGTCTGTTATCAAGTCTCGGATTCCAGGTCTCCAGTCTCTTATCAACAAAACTATAAT
TGAGCTAGAAACTGAGTTGAGCCGTCTTGGAAAGCCCATTGCCACGGATGCGGGAGGAAA
ATTGTACATGATAATGGAAATCTGTCGTAGTTTTGATGGAAATTTCAAAGAACATCTTGA
TGGAGTTCGACCAGGAGGTGATAAAATATATTATGTCTTTGATAATCAGCTCCCAGCTGC
ATTAAAAAGACTGCAATTTGACAAGCAACTTTCAATGGAAAATGTAAGGAAACTTATAAC
TGAAGCGGATGGATATCAACCACATTTGATAGCTCCTGAACAAGGATACCGTCGTCTCAT
TGAATCTTCCATAGTTTCTATGAAGGGTCCTGCTGAAGCAGCTGTTGATGCGGTTCATGC
TATACTGAAGGAACTGATTCACAAGGCAATCAGTGAGACTGCGGAGCTAAAGCAGTACCC
CTCCCTACGAGTAGAGGTCAGCAATGCAGCTGTTGAATCACTAGAAAGGATGAGGGATGA
AAGCAAAAAAGCAACTCTTCAGCTGGTTGAAATGGAGTGTAGTTACCTGACCGTAGATTT
CTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGAGGGAATCCGACACATTCTATTTTTGA
CCGTTATAATGATTCCTATCTTCGAAGGATAGGGTCAAATGTCTTGTCTTATGTCAATAT
GGTTTGTGCAACTTTGAGGAATTCAATTCCGAAGTCTGTAGTTTATGGTCAAGTACGGGA
GGCCAAACGCAGCTTGCTTGATCATTTCTTCACTGATTTAGGCAAGAAGGAGGGGAAACA
GCTAGGTACTTTGTTGGATGAGGATCCAGCAATTATGCAGCGTCGTCTCTCTCTGGCAAA
GAGACTTGAGTTATACAGAGCTGCTCAAGCTGAGATTGATTCAGTAGCATGGTCTAAGTA
AACACAACTACACAAACTTCCATTTTTCATCACTTCTCGTTCACCACGATTTGCGTATAG
AGATAGGTGACCAGTGATTCTTTGCCTCGATTTGTATTTCTTATTGTAGTAGTTATAAGT
AGTGATTAGGTTAAAACTGCGGTTGCGTAGCTAGTCTCATCGACAGTACTAAAAGCCATT
GTATGGACTTGATATTGCTATTACATCTTTGCTTGTAGAGTATATATTGAATGTGATGTG
TTGCCATTTCATACACATTTTGACAGGATCAATGCGTCTTATAATAACCAATCACATCTG
ATTGATTTTGTG