Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g050560.1.1
CDS Infomation

Basic helix-loop-helix (BHLH) family transcription factor (AHRD V3.3 *** A0A0K9PZ13_ZOSMR)
Sequence

ATGACTATGTTGTGGAGTGATGAGGATAAGACTATGGTGGCAGCGGTATTAGGAACAAAA
GCTTTTGATTACTTGATGTCTAGTTTAGTTTCTGCTGAATGTTCTTTAATGGCAATGGGG
AGTGATGAGAATTTGCAGAATATGCTATCAGATCTTGTGGAACGTCCGAATGCAAGTAAT
TTTAGTTGGAATTATGCAATTTTTTGGCAGATTTCGCGGTCTAAGTTGGGGGAGTTGGTG
TTAGGATGGGGAGATGGTTGTTGTAGGGAAGCTAGGGAAGGAGAGGAATCTGAACTTACT
AGGATTCTCAATATACGCCTCGCGGATGAGGCTCAACAAAGGATGAGGAAGAGGGTTCTT
CAGAAGTTGCATATGTTTTTTGGTGGAACAGATGAAGATAACTATGTGTCTGGATTGGAT
AAAGTCACTGATACTGAAATGTTCTTTCTTGCTTCAATGTACTTTTCGTTTCCTCGAGGG
CAAGGTGGTCCGGGGAAATGTTTTACTGCTGGTAAACATGTGTGGTTATCGGATGTTATG
AGGTCGTCTGTAGATTATTGTTCTAGGTCTTTTCTGATGAAGTCTGCTGGTATGCAAACA
GTTGTTTTGATCCCAACTGATATAGGGGTTATGGAATTGGGATCTGTACGAACTATACCA
GAAAGCTTGGAGCTTGTACATTCAATAAAATCTTGCTTCTCGTCGTTTTTGGCTCAAGTT
AGGGCTAAGCAAGCGGCACCTTTAGCAGCAGTTGTAGCTGAGAAAAAGAATGGAAACAAT
TCTGTGTTTCCCAGCTCTTTTCCTTTTGATCAGTCAAAGGAAAATCCGAAGATCTTTGGG
CAGAATTTAGAATCTGGTTCTACCGAGTTTAGGGAAAAACTTGCTCTCAGGAAACCGGTG
GATGGGCCACTGGAAATGTATAGAAATGGAAACAGGGCTCCCATCATAAATACACAAAAT
GGTGTACGCCCCGTATCATGGGCTTCATTTGGTAATGTAAAGCCAGGGAACTCGGTGGAT
CTCTATAGTCCTCAGGCACCACCAAACAACTTACGAGAGTTTGTCAATGGTGGAAGAGAA
GAGCTCCGGTTAAATAGCCTCCAGCATCAAAAGCCTGGTGGAATGCAAATAGATTTCACC
AACTCAAGACCCGTTGTTTCTCCAGTGCCCACTGTTGAATCGGAGCATTCAGATGTTGAA
GTTTCATGCAAGGAAAAACATGCAGGACCAGCTGATGAAAGGAGGCCTCGAAAGCGTGGA
AGAAAACCAGCCAATGGAAGGGAAGAGCCCCTCAATCATGTAGAAGCTGAGAGGCAACGG
AGGGAGAAGCTGAACCAGCGGTTTTATGCATTACGAGCTGTTGTTCCAAATATTTCCAAA
ATGGACAAAGCTTCCCTCTTAGGAGATGCCATTGCTCACATCACTGACATGCAGAAGAGG
ATCAGGGACGCGGAATATAAGCTGGAAAAGCGAGGAAGCACCTCTGTGGATGCAGCTGAT
ATCAACATTGAAGCCGCCAGTGATGAAGTCATCGTAAGAGCTAGATGCCCACTGGGAACC
CATCCTGTAGCAAAAGTCGTTGAAGCGTTCAAAGAGACACAGGTCAGCGTTGTTGAGTCA
AAACTTGCCGTGGGAAATGATACAGTATATCATACATTTGTGGTCAAGTCCAGTGGACCC
GAACAGCTAACGAAGGAAAAGCTAATGGCTGCATTTGCTGGTGAATCAAACTCTCTCTAG

Peptide Sequence

PEP ID

Solyc05g050560.1.1
PEP Infomation

Basic helix-loop-helix (BHLH) family transcription factor (AHRD V3.3 *** A0A0K9PZ13_ZOSMR)
Sequence

MTMLWSDEDKTMVAAVLGTKAFDYLMSSLVSAECSLMAMGSDENLQNMLSDLVERPNASN
FSWNYAIFWQISRSKLGELVLGWGDGCCREAREGEESELTRILNIRLADEAQQRMRKRVL
QKLHMFFGGTDEDNYVSGLDKVTDTEMFFLASMYFSFPRGQGGPGKCFTAGKHVWLSDVM
RSSVDYCSRSFLMKSAGMQTVVLIPTDIGVMELGSVRTIPESLELVHSIKSCFSSFLAQV
RAKQAAPLAAVVAEKKNGNNSVFPSSFPFDQSKENPKIFGQNLESGSTEFREKLALRKPV
DGPLEMYRNGNRAPIINTQNGVRPVSWASFGNVKPGNSVDLYSPQAPPNNLREFVNGGRE
ELRLNSLQHQKPGGMQIDFTNSRPVVSPVPTVESEHSDVEVSCKEKHAGPADERRPRKRG
RKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAHITDMQKR
IRDAEYKLEKRGSTSVDAADINIEAASDEVIVRARCPLGTHPVAKVVEAFKETQVSVVES
KLAVGNDTVYHTFVVKSSGPEQLTKEKLMAAFAGESNSL*

Transcript Sequence

Transcript ID

Solyc05g050560.1.1
Transcript Infomation

Basic helix-loop-helix (BHLH) family transcription factor (AHRD V3.3 *** A0A0K9PZ13_ZOSMR)
Sequence

ATGACTATGTTGTGGAGTGATGAGGATAAGACTATGGTGGCAGCGGTATTAGGAACAAAA
GCTTTTGATTACTTGATGTCTAGTTTAGTTTCTGCTGAATGTTCTTTAATGGCAATGGGG
AGTGATGAGAATTTGCAGAATATGCTATCAGATCTTGTGGAACGTCCGAATGCAAGTAAT
TTTAGTTGGAATTATGCAATTTTTTGGCAGATTTCGCGGTCTAAGTTGGGGGAGTTGGTG
TTAGGATGGGGAGATGGTTGTTGTAGGGAAGCTAGGGAAGGAGAGGAATCTGAACTTACT
AGGATTCTCAATATACGCCTCGCGGATGAGGCTCAACAAAGGATGAGGAAGAGGGTTCTT
CAGAAGTTGCATATGTTTTTTGGTGGAACAGATGAAGATAACTATGTGTCTGGATTGGAT
AAAGTCACTGATACTGAAATGTTCTTTCTTGCTTCAATGTACTTTTCGTTTCCTCGAGGG
CAAGGTGGTCCGGGGAAATGTTTTACTGCTGGTAAACATGTGTGGTTATCGGATGTTATG
AGGTCGTCTGTAGATTATTGTTCTAGGTCTTTTCTGATGAAGTCTGCTGGTATGCAAACA
GTTGTTTTGATCCCAACTGATATAGGGGTTATGGAATTGGGATCTGTACGAACTATACCA
GAAAGCTTGGAGCTTGTACATTCAATAAAATCTTGCTTCTCGTCGTTTTTGGCTCAAGTT
AGGGCTAAGCAAGCGGCACCTTTAGCAGCAGTTGTAGCTGAGAAAAAGAATGGAAACAAT
TCTGTGTTTCCCAGCTCTTTTCCTTTTGATCAGTCAAAGGAAAATCCGAAGATCTTTGGG
CAGAATTTAGAATCTGGTTCTACCGAGTTTAGGGAAAAACTTGCTCTCAGGAAACCGGTG
GATGGGCCACTGGAAATGTATAGAAATGGAAACAGGGCTCCCATCATAAATACACAAAAT
GGTGTACGCCCCGTATCATGGGCTTCATTTGGTAATGTAAAGCCAGGGAACTCGGTGGAT
CTCTATAGTCCTCAGGCACCACCAAACAACTTACGAGAGTTTGTCAATGGTGGAAGAGAA
GAGCTCCGGTTAAATAGCCTCCAGCATCAAAAGCCTGGTGGAATGCAAATAGATTTCACC
AACTCAAGACCCGTTGTTTCTCCAGTGCCCACTGTTGAATCGGAGCATTCAGATGTTGAA
GTTTCATGCAAGGAAAAACATGCAGGACCAGCTGATGAAAGGAGGCCTCGAAAGCGTGGA
AGAAAACCAGCCAATGGAAGGGAAGAGCCCCTCAATCATGTAGAAGCTGAGAGGCAACGG
AGGGAGAAGCTGAACCAGCGGTTTTATGCATTACGAGCTGTTGTTCCAAATATTTCCAAA
ATGGACAAAGCTTCCCTCTTAGGAGATGCCATTGCTCACATCACTGACATGCAGAAGAGG
ATCAGGGACGCGGAATATAAGCTGGAAAAGCGAGGAAGCACCTCTGTGGATGCAGCTGAT
ATCAACATTGAAGCCGCCAGTGATGAAGTCATCGTAAGAGCTAGATGCCCACTGGGAACC
CATCCTGTAGCAAAAGTCGTTGAAGCGTTCAAAGAGACACAGGTCAGCGTTGTTGAGTCA
AAACTTGCCGTGGGAAATGATACAGTATATCATACATTTGTGGTCAAGTCCAGTGGACCC
GAACAGCTAACGAAGGAAAAGCTAATGGCTGCATTTGCTGGTGAATCAAACTCTCTCTAG