Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g050430.1.1
CDS Infomation	LOW QUALITY:NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9R1_SOLLC)
Sequence	ATGGAAACAGAGAAATTAGCAAGCAACTCATTGGTATCATCTGCTCTACTTCACAAGGAC ATTGTCGATCTTAAGGATTTCGTAGAGAGGTTAAAGAATGAACAAGATCAAGTTGAAGAG CTGAAATTTTTGTTGGCATGTTTACAGCTATGTTATTACATTTCGGATACTGAAATGTCT TGTATATCATACGAGATTCATGTTCTGGTTCAATCACTTTTTCATCAGAGTAGTGGAGAT GACATGATGGTTAAATTAACAGATCACGTCGTTCCTCGCCTCCTTGAAGATATCACAAGT TCTAAAATCTCAGATCATCATCATTCTGCTGCCATGAATGAGGATCAGTTGGTTGAACTT TTGGACGTACTCCTCGTGAATCTCCATAACCTACCCAAGGTTCGTGTTGAGTTGATTTCC CCATCAATGACTCAATATGAGCTTCTTCAGAATCTATTTGGCAATTTAAGAGGTTTCCAT GCGCTGAAAGTAAATGGTTGTGTTGAGTATGAGACAATCGAATATGTCTTACCACAGTTT CAACTTATGGCGGAGAAAGTAGGACACTTCTGTTTTGTCCTTTTGTCTTCTCAACTTGAT AAAACAGATGAAGAAGATGACAATGAACATGTAGTCTCTCAAGTCAATTCCATGCTAGTC GATCTACTATTGAAGATAATTCCGGTTTCACTGGATGTTATGCACCTATGTTGTACAAAT TTCAAAGGTTCAAAGTCGGAAGAAGTTGGATTTTTCATCAAGCAGCTCCTAGAAGCCTCT CCGGACATTCTTAGAGAATCTCTAATTCATCTACAAGAGCACATGGTTATTACTGTTGTT ACTCCTAGCGCTTCAACGTATAACATTCATGTCATGATAGAGTTCCTATTGATTATTCTT ACTGATCGGCTCAAGGCCGTTATTCATCATGACAAATTGTTTGTTCTCTTGGCACGAGTT ATACAACTTACCAAGGAGGTATTTGTTTTTCTTCGTAACTTAGAAGAGAACATGAATGAA GCATGTGGTTCAAATCTAAACTTGCTGGAAAACATTGAACTCTTGAAGGTTGATCTTAAG AATGATTTCTTAAAAGCTCGTGCAGACTCATCTCAGGTCCCCTTCCCCATGAGTGATGGA CCGCTCTTCATGACTCTTCTGCTCACAAACTTAAAAGACTTGGCCTATTCCAATGCTTAT TCAGTTTCTTTGATAAAAGAAGAAATTAAGCAGGTGAAACAAGACCTGGAAATCATAAGA TCGTTGTTCGATTATGCTGAGCAAGAGTTGCATAAAGATCTTTGGACTCGTGTTCTAGAT TTGGCACATGAGATGCAACATGCCATTAACTCAATTCTTGCCCGAGATCATGGTTTATTG CAGCTTATCTTCATACTTCCTGATACCATTGAAAAGATCAAGCTTGTCAAAAAACAGGTA CAAGAAAAGATCTCCAAGAGAAGCGGTATTATTGTTGCAAACGCTCCCAACAAGCCGGTT GAAAGACACTCATCGAGTATAGTTGGTAAAATAATTGTAGGTTTTGAGGAGGAGACAGAG TGGATAATTAGGAAGCTCACCAGCGGACCAGATGAGATAGATGTCATTTCCATTGTCGGC ATGCCTGGGCTTGGAAAAACTACTTTGTGCACAGTCGACCAGGAACGTAATGAGAAAAAG TTGTTGCAGAAAATTTTCAATCAAGTTATTGGTTTGAAAGAAAGATTCAATGAGGATCAT GACATAGATGATGATGTTGCTGATAAGCTGCGGAGAAAATTATTTGGGAAACGGTACCTT ATTGTCTTGGATGACATGTGGGATACTGATATATTAGATGATCTAATGAGACCTTTTCCT AAATTTCATGAAGGAAGCAGAGTGATTTTAACAAGTCGGAAAAAGGAAATTGCGTTGCAT GGAAAATGCCACAGTGATCCTCTTTATCTTCGATTGCTAAGATCAGAAGAAAGTTGGGAG TTATTCAATAAAAGGGTATTCGGAGAAGAAGGTTGCCCTGATGAATTAAAGGATGTCGGA GAAAAGATAGCTCTAAAGTGTGGTGGTCTTCCTTTAGTAGTTGATCTAATCGGTGGAGTC ATTTCAAAAAAGGAAAAGAAGGAGGCTTTGTGGGCTGAAGTTCTGAATGATTTGAGTTCC TCTATTTTTAAGGATGAAGAGGAAGTTGTGAAAGTTATACAATTAAGTTATGAGCATTTG TCACATGATGTAAAGCCGTGTTTGCTTTGCCTTGCAACTTATCCAAAGGACGAAGATATA AGTATGTCTGAGTTGAAAGATTTGTGGATTTTTCAAGGACTTGAGATGAAAAGTGCAGAA GAAGTAGTGGATGAGTTAATTTCGAGTAGTTTGGTAATACCTTTCGATGATTCTATTTTC AAAATTCATGATCTTGTGCATGACTTTTGTTATATAAAATCTAGAAAGGAAAAGTTGCTT CACTTCATAGGAGGTTCAAAAGCTCCGTCTTCTTCGGATCTTATGCCACGTGGAATTATC GTTCATTCTTATAAATATGTATTTTCTTTGGATGAGTATTTTGCGGTGTTTGATCCACAA CAGAAGATTCCCTATGTTAAACACCTCCTCTCTCTGAAGGACTTTGACGTGACCAGTATT TGTCTTTCCTACAGGAGTCACCTAAAACACTTGAGGCTTCTCAAAAGTTTGGATTTGCGT GGCATAACATTGCCGGATTCTTTGCTGAATGAAATCGGTATGCTCGTTCATTTGAAGTAC TTAAAAATTCGGATGAAGGCAAAAGCTCTCCCTCCGTCATTTTCAAACCTCTGCAATCTA GAAACTCTGATAGTGGATAACTGGGTGGGATCAATCATATTACTATCACCTTGTTTTTGG AGTCTCGCAAAGCTACGAGTTGTGCAGATGACTTGGGGTGCTGTGTTTGATCCGGTCATC ACTGTGTTAGATGAGGATTTAAGGTTAGAAAATTTGACAACATTACATAATCTCTTCCTT CTCGGTTCAGAAGACACGGAGGATATTTTCAAAAGGTTTCCTAATCTTAAAAACCTTCAA GTCTGTATCAGAGAACAAATACCAAAGAAGATATGTTTTCCAAGATTGGATGTCCTCAAT TTATATGTTTTTCCTCTGAATTCATTCCCTGAATATACACATGGCTTCCCTTTGAGCTTG AAGAAGCTGATGTTGAAAGAGCTCACTCTGACATCCGATACACTTTCAAGTATTGCTAGA CTACCCAACCTTGAAGAACTAACTCTAAAAAATGCAATCATCGAGGAGGGGAAAGAATGG AACATGGAAGATCATGTCGCTTTCCAGAATCTCAAATCTCTAACATTGTCTCGTCTGATA TTTTCTGAATGGAACATGGAAGATCATGTCATTTTCCAAGATCTCAAATATTTAGAATTG GAAGGATTGAATTTTTCAGAATGGAAGGTTGATGCAGAGAAATCCTTTCCCATGCTCGAG AAACTATTTATACATGGATGTTATAAGCTTATGGAGATCCCAGACAGTTTTGGAGATATT GCGTCATTAAAGTTTATTGGTGTACAGTTCAGCCCTCAGCTTAAAGAGTCGTTGTTCAAA ATTAAGGAATATGTAGAGGAAATAAACAGAGATGACAAGCTTGACGTAGAATTCTACGGT TGGGGGTCTTAA

Peptide Sequence

PEP ID	Solyc05g050430.1.1
PEP Infomation	LOW QUALITY:NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9R1_SOLLC)
Sequence	METEKLASNSLVSSALLHKDIVDLKDFVERLKNEQDQVEELKFLLACLQLCYYISDTEMS CISYEIHVLVQSLFHQSSGDDMMVKLTDHVVPRLLEDITSSKISDHHHSAAMNEDQLVEL LDVLLVNLHNLPKVRVELISPSMTQYELLQNLFGNLRGFHALKVNGCVEYETIEYVLPQF QLMAEKVGHFCFVLLSSQLDKTDEEDDNEHVVSQVNSMLVDLLLKIIPVSLDVMHLCCTN FKGSKSEEVGFFIKQLLEASPDILRESLIHLQEHMVITVVTPSASTYNIHVMIEFLLIIL TDRLKAVIHHDKLFVLLARVIQLTKEVFVFLRNLEENMNEACGSNLNLLENIELLKVDLK NDFLKARADSSQVPFPMSDGPLFMTLLLTNLKDLAYSNAYSVSLIKEEIKQVKQDLEIIR SLFDYAEQELHKDLWTRVLDLAHEMQHAINSILARDHGLLQLIFILPDTIEKIKLVKKQV QEKISKRSGIIVANAPNKPVERHSSSIVGKIIVGFEEETEWIIRKLTSGPDEIDVISIVG MPGLGKTTLCTVDQERNEKKLLQKIFNQVIGLKERFNEDHDIDDDVADKLRRKLFGKRYL IVLDDMWDTDILDDLMRPFPKFHEGSRVILTSRKKEIALHGKCHSDPLYLRLLRSEESWE LFNKRVFGEEGCPDELKDVGEKIALKCGGLPLVVDLIGGVISKKEKKEALWAEVLNDLSS SIFKDEEEVVKVIQLSYEHLSHDVKPCLLCLATYPKDEDISMSELKDLWIFQGLEMKSAE EVVDELISSSLVIPFDDSIFKIHDLVHDFCYIKSRKEKLLHFIGGSKAPSSSDLMPRGII VHSYKYVFSLDEYFAVFDPQQKIPYVKHLLSLKDFDVTSICLSYRSHLKHLRLLKSLDLR GITLPDSLLNEIGMLVHLKYLKIRMKAKALPPSFSNLCNLETLIVDNWVGSIILLSPCFW SLAKLRVVQMTWGAVFDPVITVLDEDLRLENLTTLHNLFLLGSEDTEDIFKRFPNLKNLQ VCIREQIPKKICFPRLDVLNLYVFPLNSFPEYTHGFPLSLKKLMLKELTLTSDTLSSIAR LPNLEELTLKNAIIEEGKEWNMEDHVAFQNLKSLTLSRLIFSEWNMEDHVIFQDLKYLEL EGLNFSEWKVDAEKSFPMLEKLFIHGCYKLMEIPDSFGDIASLKFIGVQFSPQLKESLFK IKEYVEEINRDDKLDVEFYGWGS*

Transcript Sequence

Transcript ID	Solyc05g050430.1.1
Transcript Infomation	LOW QUALITY:NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9R1_SOLLC)
Sequence	ATGGAAACAGAGAAATTAGCAAGCAACTCATTGGTATCATCTGCTCTACTTCACAAGGAC ATTGTCGATCTTAAGGATTTCGTAGAGAGGTTAAAGAATGAACAAGATCAAGTTGAAGAG CTGAAATTTTTGTTGGCATGTTTACAGCTATGTTATTACATTTCGGATACTGAAATGTCT TGTATATCATACGAGATTCATGTTCTGGTTCAATCACTTTTTCATCAGAGTAGTGGAGAT GACATGATGGTTAAATTAACAGATCACGTCGTTCCTCGCCTCCTTGAAGATATCACAAGT TCTAAAATCTCAGATCATCATCATTCTGCTGCCATGAATGAGGATCAGTTGGTTGAACTT TTGGACGTACTCCTCGTGAATCTCCATAACCTACCCAAGGTTCGTGTTGAGTTGATTTCC CCATCAATGACTCAATATGAGCTTCTTCAGAATCTATTTGGCAATTTAAGAGGTTTCCAT GCGCTGAAAGTAAATGGTTGTGTTGAGTATGAGACAATCGAATATGTCTTACCACAGTTT CAACTTATGGCGGAGAAAGTAGGACACTTCTGTTTTGTCCTTTTGTCTTCTCAACTTGAT AAAACAGATGAAGAAGATGACAATGAACATGTAGTCTCTCAAGTCAATTCCATGCTAGTC GATCTACTATTGAAGATAATTCCGGTTTCACTGGATGTTATGCACCTATGTTGTACAAAT TTCAAAGGTTCAAAGTCGGAAGAAGTTGGATTTTTCATCAAGCAGCTCCTAGAAGCCTCT CCGGACATTCTTAGAGAATCTCTAATTCATCTACAAGAGCACATGGTTATTACTGTTGTT ACTCCTAGCGCTTCAACGTATAACATTCATGTCATGATAGAGTTCCTATTGATTATTCTT ACTGATCGGCTCAAGGCCGTTATTCATCATGACAAATTGTTTGTTCTCTTGGCACGAGTT ATACAACTTACCAAGGAGGTATTTGTTTTTCTTCGTAACTTAGAAGAGAACATGAATGAA GCATGTGGTTCAAATCTAAACTTGCTGGAAAACATTGAACTCTTGAAGGTTGATCTTAAG AATGATTTCTTAAAAGCTCGTGCAGACTCATCTCAGGTCCCCTTCCCCATGAGTGATGGA CCGCTCTTCATGACTCTTCTGCTCACAAACTTAAAAGACTTGGCCTATTCCAATGCTTAT TCAGTTTCTTTGATAAAAGAAGAAATTAAGCAGGTGAAACAAGACCTGGAAATCATAAGA TCGTTGTTCGATTATGCTGAGCAAGAGTTGCATAAAGATCTTTGGACTCGTGTTCTAGAT TTGGCACATGAGATGCAACATGCCATTAACTCAATTCTTGCCCGAGATCATGGTTTATTG CAGCTTATCTTCATACTTCCTGATACCATTGAAAAGATCAAGCTTGTCAAAAAACAGGTA CAAGAAAAGATCTCCAAGAGAAGCGGTATTATTGTTGCAAACGCTCCCAACAAGCCGGTT GAAAGACACTCATCGAGTATAGTTGGTAAAATAATTGTAGGTTTTGAGGAGGAGACAGAG TGGATAATTAGGAAGCTCACCAGCGGACCAGATGAGATAGATGTCATTTCCATTGTCGGC ATGCCTGGGCTTGGAAAAACTACTTTGTGCACAGTCGACCAGGAACGTAATGAGAAAAAG TTGTTGCAGAAAATTTTCAATCAAGTTATTGGTTTGAAAGAAAGATTCAATGAGGATCAT GACATAGATGATGATGTTGCTGATAAGCTGCGGAGAAAATTATTTGGGAAACGGTACCTT ATTGTCTTGGATGACATGTGGGATACTGATATATTAGATGATCTAATGAGACCTTTTCCT AAATTTCATGAAGGAAGCAGAGTGATTTTAACAAGTCGGAAAAAGGAAATTGCGTTGCAT GGAAAATGCCACAGTGATCCTCTTTATCTTCGATTGCTAAGATCAGAAGAAAGTTGGGAG TTATTCAATAAAAGGGTATTCGGAGAAGAAGGTTGCCCTGATGAATTAAAGGATGTCGGA GAAAAGATAGCTCTAAAGTGTGGTGGTCTTCCTTTAGTAGTTGATCTAATCGGTGGAGTC ATTTCAAAAAAGGAAAAGAAGGAGGCTTTGTGGGCTGAAGTTCTGAATGATTTGAGTTCC TCTATTTTTAAGGATGAAGAGGAAGTTGTGAAAGTTATACAATTAAGTTATGAGCATTTG TCACATGATGTAAAGCCGTGTTTGCTTTGCCTTGCAACTTATCCAAAGGACGAAGATATA AGTATGTCTGAGTTGAAAGATTTGTGGATTTTTCAAGGACTTGAGATGAAAAGTGCAGAA GAAGTAGTGGATGAGTTAATTTCGAGTAGTTTGGTAATACCTTTCGATGATTCTATTTTC AAAATTCATGATCTTGTGCATGACTTTTGTTATATAAAATCTAGAAAGGAAAAGTTGCTT CACTTCATAGGAGGTTCAAAAGCTCCGTCTTCTTCGGATCTTATGCCACGTGGAATTATC GTTCATTCTTATAAATATGTATTTTCTTTGGATGAGTATTTTGCGGTGTTTGATCCACAA CAGAAGATTCCCTATGTTAAACACCTCCTCTCTCTGAAGGACTTTGACGTGACCAGTATT TGTCTTTCCTACAGGAGTCACCTAAAACACTTGAGGCTTCTCAAAAGTTTGGATTTGCGT GGCATAACATTGCCGGATTCTTTGCTGAATGAAATCGGTATGCTCGTTCATTTGAAGTAC TTAAAAATTCGGATGAAGGCAAAAGCTCTCCCTCCGTCATTTTCAAACCTCTGCAATCTA GAAACTCTGATAGTGGATAACTGGGTGGGATCAATCATATTACTATCACCTTGTTTTTGG AGTCTCGCAAAGCTACGAGTTGTGCAGATGACTTGGGGTGCTGTGTTTGATCCGGTCATC ACTGTGTTAGATGAGGATTTAAGGTTAGAAAATTTGACAACATTACATAATCTCTTCCTT CTCGGTTCAGAAGACACGGAGGATATTTTCAAAAGGTTTCCTAATCTTAAAAACCTTCAA GTCTGTATCAGAGAACAAATACCAAAGAAGATATGTTTTCCAAGATTGGATGTCCTCAAT TTATATGTTTTTCCTCTGAATTCATTCCCTGAATATACACATGGCTTCCCTTTGAGCTTG AAGAAGCTGATGTTGAAAGAGCTCACTCTGACATCCGATACACTTTCAAGTATTGCTAGA CTACCCAACCTTGAAGAACTAACTCTAAAAAATGCAATCATCGAGGAGGGGAAAGAATGG AACATGGAAGATCATGTCGCTTTCCAGAATCTCAAATCTCTAACATTGTCTCGTCTGATA TTTTCTGAATGGAACATGGAAGATCATGTCATTTTCCAAGATCTCAAATATTTAGAATTG GAAGGATTGAATTTTTCAGAATGGAAGGTTGATGCAGAGAAATCCTTTCCCATGCTCGAG AAACTATTTATACATGGATGTTATAAGCTTATGGAGATCCCAGACAGTTTTGGAGATATT GCGTCATTAAAGTTTATTGGTGTACAGTTCAGCCCTCAGCTTAAAGAGTCGTTGTTCAAA ATTAAGGAATATGTAGAGGAAATAAACAGAGATGACAAGCTTGACGTAGAATTCTACGGT TGGGGGTCTTAA