Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g050390.3.1
CDS Infomation

beclin 1
Sequence

ATGGTGAAAGGCAGCAGCGCTACACCGGATAAGGGTCGGACTTTACCGGTTGACCCGAAT
CTTCCCCGGTACATCTGTCAGAACTGCCACAATCCCCTTTGCATCGCCGGCGTCGATAAT
TATGCCGACAAGTTTTTCCCTGATTCTTCTTATCGCTCCGGGATGCAGGCCTCTTCAATT
CATGGAGCTGGTAGTGCTATAGGGTCGACGAGCCGAATGGAAAATTCGTATGTTATGTTG
CCAAAGCAAAGAAATCAGGGATCAGGAATTCCGCCTCGAGGACGAGGATCTGCACAGCCA
GATGCAAGCCAGTTTGGGAGGGCCATGGAAGAATCATTTGTGGTTTTGCCTCCACCAGCT
GCTTCAGTATATAAGTGTGAGCCTACGTCTGATGGATCTGGTACAAATCTTCCATCACCA
GATGGTGGACCTCCAAATGCTCCCATGCAGTCAAACAATTCTGGGTTTCACTCCACCATC
ACTGTCCTAAAACGTGCATTTGATATTGCCACAACACAGACCCAGATTGAGCAACCCCTA
TGTCTTGAATGCATGAGGGTGCTGTCTGATAAACTTGATAAGGAGGTTGAAGATGTTAAC
AGGGACATACAAGCCTATGAAGCTTGCCTTCATCAATTGGAGGGAGAAGCAAGAAATGTT
CTTAGCGAGGCTGATTTTCTGAAGGAGAAGTTGAAGGTTGTTAACAATTTTGAGTCACTT
AAAGGACATCATAGTTTTCCCTTTATATATAAGAGGACAAAGAAGCAATGTGCTGTAGTC
ACTGCTGAACTGAAGGAACTAGAGATGAAGTCTGGCCGCTTTAAGGAGTTGGAAGAGCGG
TACTGGCAAGAATTCAATAACTTTCAGTTTCAGTTGATATCTCATCAGGAAGAGAGAGAT
GCAATTTTAGCTAAGACAGAAGTTTCACAAGCTCACTTAGAGCTGCTAAAGCGGACTAAT
GTGCTCAATGATGCATTTCCAATCTGGTATGATGGTGAATTTGGAACAATTAACAACTTT
CGTCTCGGAAGACTTCCTAAAATTCCGGTTGAGTGGGACGAGATAAATGCAGCATGGGGT
CAAGCGTGCCTTCTTCTCCATACAATGGCTCAGCATTTCCGACCAAAGTTTCAATATCGG
ATAAAAATTATTCCTATGGGAAGTTATCCTCGGATCATAGACACCAACAATACTACTTAT
GAACTATTTGGCCCAGTAAATCTCTTCTGGAGCACACGGTATGATAAAGCAATGACATTG
TTCTTGATCTGCCTAAAGGAGTTCTCCGAGTTTGCAAATTCAAAAGACAGGGAAAACAAC
ATTCGTCCTGATAAATGTTTTAAGCTTCCTTACAAGATTGAAAATGACAAAGTTGAAAGT
TACTCCATAACCCAGAGCTTTAACAAACAAGAAAATTGGACCAAAGCTCTCAAGTACACA
CTCTGCAATTTGAAGTGGGTGCTCTACTGGTTTGTTGGTAACACAAATTTCCAGCCACTT
TCTGGAACAGTCTCTTCACAAGCTGAAGTTCCAGCTGCAGCAGGATCACTGTACAGCAAA
CAACCAACTAATACCAAGTTTCAATCTTGA

Peptide Sequence

PEP ID

Solyc05g050390.3.1
PEP Infomation

beclin 1
Sequence

MVKGSSATPDKGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFFPDSSYRSGMQASSI
HGAGSAIGSTSRMENSYVMLPKQRNQGSGIPPRGRGSAQPDASQFGRAMEESFVVLPPPA
ASVYKCEPTSDGSGTNLPSPDGGPPNAPMQSNNSGFHSTITVLKRAFDIATTQTQIEQPL
CLECMRVLSDKLDKEVEDVNRDIQAYEACLHQLEGEARNVLSEADFLKEKLKVVNNFESL
KGHHSFPFIYKRTKKQCAVVTAELKELEMKSGRFKELEERYWQEFNNFQFQLISHQEERD
AILAKTEVSQAHLELLKRTNVLNDAFPIWYDGEFGTINNFRLGRLPKIPVEWDEINAAWG
QACLLLHTMAQHFRPKFQYRIKIIPMGSYPRIIDTNNTTYELFGPVNLFWSTRYDKAMTL
FLICLKEFSEFANSKDRENNIRPDKCFKLPYKIENDKVESYSITQSFNKQENWTKALKYT
LCNLKWVLYWFVGNTNFQPLSGTVSSQAEVPAAAGSLYSKQPTNTKFQS*

Transcript Sequence

Transcript ID

Solyc05g050390.3.1
Transcript Infomation

beclin 1
Sequence

GATAATATGATACGAATGCTTGCGTAATTAGTTAAATGTTTTTTTTTTAATCTTTTAAAA
TAAAATAAATTTTGCAAATTGACAGGGTGAATCGTGATAGACTGGGCCGGGTCAGCCCAG
CACGCCACTTTTGCTTTTCTCTGAGAAATTCGTCCATCTCCATGGTGAAAGGCAGCAGCG
CTACACCGGATAAGGGTCGGACTTTACCGGTTGACCCGAATCTTCCCCGGTACATCTGTC
AGAACTGCCACAATCCCCTTTGCATCGCCGGCGTCGATAATTATGCCGACAAGTTTTTCC
CTGATTCTTCTTATCGCTCCGGGATGCAGGCCTCTTCAATTCATGGAGCTGGTAGTGCTA
TAGGGTCGACGAGCCGAATGGAAAATTCGTATGTTATGTTGCCAAAGCAAAGAAATCAGG
GATCAGGAATTCCGCCTCGAGGACGAGGATCTGCACAGCCAGATGCAAGCCAGTTTGGGA
GGGCCATGGAAGAATCATTTGTGGTTTTGCCTCCACCAGCTGCTTCAGTATATAAGTGTG
AGCCTACGTCTGATGGATCTGGTACAAATCTTCCATCACCAGATGGTGGACCTCCAAATG
CTCCCATGCAGTCAAACAATTCTGGGTTTCACTCCACCATCACTGTCCTAAAACGTGCAT
TTGATATTGCCACAACACAGACCCAGATTGAGCAACCCCTATGTCTTGAATGCATGAGGG
TGCTGTCTGATAAACTTGATAAGGAGGTTGAAGATGTTAACAGGGACATACAAGCCTATG
AAGCTTGCCTTCATCAATTGGAGGGAGAAGCAAGAAATGTTCTTAGCGAGGCTGATTTTC
TGAAGGAGAAGTTGAAGGTTGTTAACAATTTTGAGTCACTTAAAGGACATCATAGTTTTC
CCTTTATATATAAGAGGACAAAGAAGCAATGTGCTGTAGTCACTGCTGAACTGAAGGAAC
TAGAGATGAAGTCTGGCCGCTTTAAGGAGTTGGAAGAGCGGTACTGGCAAGAATTCAATA
ACTTTCAGTTTCAGTTGATATCTCATCAGGAAGAGAGAGATGCAATTTTAGCTAAGACAG
AAGTTTCACAAGCTCACTTAGAGCTGCTAAAGCGGACTAATGTGCTCAATGATGCATTTC
CAATCTGGTATGATGGTGAATTTGGAACAATTAACAACTTTCGTCTCGGAAGACTTCCTA
AAATTCCGGTTGAGTGGGACGAGATAAATGCAGCATGGGGTCAAGCGTGCCTTCTTCTCC
ATACAATGGCTCAGCATTTCCGACCAAAGTTTCAATATCGGATAAAAATTATTCCTATGG
GAAGTTATCCTCGGATCATAGACACCAACAATACTACTTATGAACTATTTGGCCCAGTAA
ATCTCTTCTGGAGCACACGGTATGATAAAGCAATGACATTGTTCTTGATCTGCCTAAAGG
AGTTCTCCGAGTTTGCAAATTCAAAAGACAGGGAAAACAACATTCGTCCTGATAAATGTT
TTAAGCTTCCTTACAAGATTGAAAATGACAAAGTTGAAAGTTACTCCATAACCCAGAGCT
TTAACAAACAAGAAAATTGGACCAAAGCTCTCAAGTACACACTCTGCAATTTGAAGTGGG
TGCTCTACTGGTTTGTTGGTAACACAAATTTCCAGCCACTTTCTGGAACAGTCTCTTCAC
AAGCTGAAGTTCCAGCTGCAGCAGGATCACTGTACAGCAAACAACCAACTAATACCAAGT
TTCAATCTTGAATCACTAATAACAACTTCTCCCCTCGTTCTAATCGTGTCGTAAGTAGAC
AAGAAACTCAAATTATATGGATGCAAAGCGATCACTTGTAATATTGCATCATTTTATTTA
TTTTCTTGTCTCCTTGAAATAGTTTGGCGTTGTGCATTTGGTTTACATAGGAGTTTATCA
ATGGAGGAATTAGAAAATTGAACTTGGTTTACAATTTACATAGGAGTTTATCAATGGAGG
AATTAGAAAAAT