Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g050350.2.1
CDS Infomation	Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR)
Sequence	ATGATGATGAATCCCAAGCAGGACAAATATGTAAGGTTTGAGGACAGGAAGTTGGAACAA TCATCCTTCAGCGTTGACCATAAAAGTTCGTCGACTAATAGGCTATTTCGCGTCAAAAAA CCATCAGCTAGCTCGTTCATGAGAAGCGTTAAAAGAAGGATTGAGAAGGGTTCTGAAAGA ATAAGTAGTAGGAGAAAACCAGTTCGCGTCCATCGTGTAACAAAAGATCAATCTATTGCA TCAAACAAGAGAGTTCTTGATCCTCAGGGTCAATTTCTTCAGAAATGGAACAAAGTATTT ATATTGGCTTGTGTATTTGCGGTGTCACTTGATCCGTTGTTCTTCTACATTCCTGTTATT GATGACAAAAACAAGTGCCTAGATTTGGACAACACGTTAAAGATCACTGCTTGCGTTCTT CGTTCTATCACTGACCTTTTCTATGTCTTTCACATTATCTTGAAATTTCGTACTGGCTTC ATTGCTCCTTCTTCTCGAGTTTATGGAGTGGGTGAGTTAATTGAAGATTCTTCTGCTATA GCCAAGCGATATTTGTTATCTTATTTCATCGTTGACGTTGTAGCAGTCCTTCCACTCCCA CAGATTGTGATATTGATTATCGCTCCCAACGTGAATGGCCCCATTGCTCTGGCGACGAAA GAAATGTTGAAGATTGTAATTTTTGCTCAATATGTTCCAAGACTTTTTAGAATTTATCCA TTGTCCAAAGAAATAGAAAGGACTACAGGCTTCTTTAATGAGAGTGCATTGGGTGGAGCT GTTTTCAACCTTTTCCTCTACATGTTGTACAGTAATGTAATTGGAGCCTTTTGGTATTTG TTCTCGATAGAACGCCAAGATACATGCTGGCGCAACGCGTGTGACAAGATCCCCAACTGT TTGTCAGACTACTTATATTGTGGAGGAAAAATGAATGGAAGTGCTTTTTTACTGAATTCT TCTTGCCCTCTCCTGCAACAAGAAGATATAAAAGATCCAAATGAATTTGATTTTGGAATC GCACTCGATGCTCTTCAGTTTCAGGTTGTGGAAAAAAGAAAATTCCGGACCAAACTCGTG TATTGCTTTTGGTGGGGGCTGAGAAACTTAAGTTCTCTTGGCCAAAACCTTAAGACAAGT ACCTTCGATGGAGATATTATCTTTGCCGTCTTCATCTCAATCATTGGGCTTATATTGTTT TCCTTGATTATTGGCAATATGCAGAAATTTATGCAATCTAACCTGGTTAGAGTAGAAGAG ATGAGAATGAGAAGGCGGGATGTCGAACAGTGGATGTCTCATCGCATGCTTCCCGACAAT CTGAGAGAGCGAATTAGAAGACATGAACAGTACAAATGGCAAGAAACAAAGGGAGTTGAG GAAGATTCACTCATTCAAAGTCTTCCTAGAGACTTGAGGAGAGATTTAAAGCGACATCTC TGTTGGTCTTTGCTCAAAAGAGTTCCTATATTTGAGAAAATGGACGACCAATTACTGGAC GCATTGTGTGACAGATTGAAACCAGCACTCTTCGCGGAGAAGAGCTTCATAATCCGAGAA GGTGATCCAGTAGAAGAAATGCACTTTCTAATGAGAGGTACATTGTTAACTATGACCACA AATGGTGGAAGGACTGGTTTTTTCAACTCTGTTCATCTCAAGGCTGGTGACTTCTGTGGT GATGAGCTTTTGACATGGGCTTTAGACCCTCATACTTCCTCCAGTAGTCTTCCGATTTCG ACTAGAACAGTGCAGGCTGTAACTGATATAGAATCTTTTTCCCTCACTGCTGATGACCTC AAGTTTGTCGCCTCACAATTTAGACGTCTGCATAGCAAGCAACTTCAGCATACTTTCAGG TTCTTCTCACAACAATGGAGGACATGGGCAGCATGCTTTATACAAGTAGCATGGCGTCGA CACTGCAGGAAAAAACTCGAGAATTCCTTAAGAGAGGAAGAAGATAAATTGCAGGTTGCA TTAGCTAAAGAGAGCACAAATGCATCAAGTCTTGGATCTATCATGTATGCATCTAGGTTT GCAGCTAATGTACTACGCGCCTTGCGACACAACAATACAACTGGTACCAGATCATTACCT CTACTGTTTCATAAACCAGCTGAACCAGATTTTAGTGAGAAAAAATGA

Peptide Sequence

PEP ID	Solyc05g050350.2.1
PEP Infomation	Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR)
Sequence	MMMNPKQDKYVRFEDRKLEQSSFSVDHKSSSTNRLFRVKKPSASSFMRSVKRRIEKGSER ISSRRKPVRVHRVTKDQSIASNKRVLDPQGQFLQKWNKVFILACVFAVSLDPLFFYIPVI DDKNKCLDLDNTLKITACVLRSITDLFYVFHIILKFRTGFIAPSSRVYGVGELIEDSSAI AKRYLLSYFIVDVVAVLPLPQIVILIIAPNVNGPIALATKEMLKIVIFAQYVPRLFRIYP LSKEIERTTGFFNESALGGAVFNLFLYMLYSNVIGAFWYLFSIERQDTCWRNACDKIPNC LSDYLYCGGKMNGSAFLLNSSCPLLQQEDIKDPNEFDFGIALDALQFQVVEKRKFRTKLV YCFWWGLRNLSSLGQNLKTSTFDGDIIFAVFISIIGLILFSLIIGNMQKFMQSNLVRVEE MRMRRRDVEQWMSHRMLPDNLRERIRRHEQYKWQETKGVEEDSLIQSLPRDLRRDLKRHL CWSLLKRVPIFEKMDDQLLDALCDRLKPALFAEKSFIIREGDPVEEMHFLMRGTLLTMTT NGGRTGFFNSVHLKAGDFCGDELLTWALDPHTSSSSLPISTRTVQAVTDIESFSLTADDL KFVASQFRRLHSKQLQHTFRFFSQQWRTWAACFIQVAWRRHCRKKLENSLREEEDKLQVA LAKESTNASSLGSIMYASRFAANVLRALRHNNTTGTRSLPLLFHKPAEPDFSEKK*

Transcript Sequence

Transcript ID	Solyc05g050350.2.1
Transcript Infomation	Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR)
Sequence	AATAAAATTTCATACAAATAATGATAGGTCATATTTGAATTGAATATTCAAATGATCCTT CTTTCCACAAAAGAAAAAGTGAATATTATATGATTATAGAATAAAGGGAATTGTTTAACA ATATATATATATACCTTAGACGGCTCTTTTGACAAAGAAAGTCAGCAAGTCAAAGTACAT CTAATAATGGGAGATGTTACGTTGATGATTTTAATGAAGTATAGAATAACATAAATAATG AATTTAATGAAGTTTTTAAAAAAACTTTAACTTGTAACATGAGTTAATGAGCGCATAAAA TAACACAAATACGACTCCTTATTTAAAAATTCGAAACCTTTAATTATATAAAGAGATAAT TTACGATATCTCTCTTTAGATTTCGCTCTATAACACTCGTCTCTCTAGAACTCTGTATTG ACTTGTGACTTGTGTCTTCCTTCCCATTAAAACCAATGGGCTACCTTATCATAGCAATAT CTAGGAACTTTCTTAAACAGAAAAAATTGAACTTACATATGCATACTACTTGTTATAAAC TTCACTACATTATTCAATTCCCATGTAAGTAAGCTGCAAATTGTGTTCATTTGACCATTT ACTGAGCACCCAATTATAGGACAAAAACTCAATATGATGATGAATCCCAAGCAGGACAAA TATGTAAGGTTTGAGGACAGGAAGTTGGAACAATCATCCTTCAGCGTTGACCATAAAAGT TCGTCGACTAATAGGCTATTTCGCGTCAAAAAACCATCAGCTAGCTCGTTCATGAGAAGC GTTAAAAGAAGGATTGAGAAGGGTTCTGAAAGAATAAGTAGTAGGAGAAAACCAGTTCGC GTCCATCGTGTAACAAAAGATCAATCTATTGCATCAAACAAGAGAGTTCTTGATCCTCAG GGTCAATTTCTTCAGAAATGGAACAAAGTATTTATATTGGCTTGTGTATTTGCGGTGTCA CTTGATCCGTTGTTCTTCTACATTCCTGTTATTGATGACAAAAACAAGTGCCTAGATTTG GACAACACGTTAAAGATCACTGCTTGCGTTCTTCGTTCTATCACTGACCTTTTCTATGTC TTTCACATTATCTTGAAATTTCGTACTGGCTTCATTGCTCCTTCTTCTCGAGTTTATGGA GTGGGTGAGTTAATTGAAGATTCTTCTGCTATAGCCAAGCGATATTTGTTATCTTATTTC ATCGTTGACGTTGTAGCAGTCCTTCCACTCCCACAGATTGTGATATTGATTATCGCTCCC AACGTGAATGGCCCCATTGCTCTGGCGACGAAAGAAATGTTGAAGATTGTAATTTTTGCT CAATATGTTCCAAGACTTTTTAGAATTTATCCATTGTCCAAAGAAATAGAAAGGACTACA GGCTTCTTTAATGAGAGTGCATTGGGTGGAGCTGTTTTCAACCTTTTCCTCTACATGTTG TACAGTAATGTAATTGGAGCCTTTTGGTATTTGTTCTCGATAGAACGCCAAGATACATGC TGGCGCAACGCGTGTGACAAGATCCCCAACTGTTTGTCAGACTACTTATATTGTGGAGGA AAAATGAATGGAAGTGCTTTTTTACTGAATTCTTCTTGCCCTCTCCTGCAACAAGAAGAT ATAAAAGATCCAAATGAATTTGATTTTGGAATCGCACTCGATGCTCTTCAGTTTCAGGTT GTGGAAAAAAGAAAATTCCGGACCAAACTCGTGTATTGCTTTTGGTGGGGGCTGAGAAAC TTAAGTTCTCTTGGCCAAAACCTTAAGACAAGTACCTTCGATGGAGATATTATCTTTGCC GTCTTCATCTCAATCATTGGGCTTATATTGTTTTCCTTGATTATTGGCAATATGCAGAAA TTTATGCAATCTAACCTGGTTAGAGTAGAAGAGATGAGAATGAGAAGGCGGGATGTCGAA CAGTGGATGTCTCATCGCATGCTTCCCGACAATCTGAGAGAGCGAATTAGAAGACATGAA CAGTACAAATGGCAAGAAACAAAGGGAGTTGAGGAAGATTCACTCATTCAAAGTCTTCCT AGAGACTTGAGGAGAGATTTAAAGCGACATCTCTGTTGGTCTTTGCTCAAAAGAGTTCCT ATATTTGAGAAAATGGACGACCAATTACTGGACGCATTGTGTGACAGATTGAAACCAGCA CTCTTCGCGGAGAAGAGCTTCATAATCCGAGAAGGTGATCCAGTAGAAGAAATGCACTTT CTAATGAGAGGTACATTGTTAACTATGACCACAAATGGTGGAAGGACTGGTTTTTTCAAC TCTGTTCATCTCAAGGCTGGTGACTTCTGTGGTGATGAGCTTTTGACATGGGCTTTAGAC CCTCATACTTCCTCCAGTAGTCTTCCGATTTCGACTAGAACAGTGCAGGCTGTAACTGAT ATAGAATCTTTTTCCCTCACTGCTGATGACCTCAAGTTTGTCGCCTCACAATTTAGACGT CTGCATAGCAAGCAACTTCAGCATACTTTCAGGTTCTTCTCACAACAATGGAGGACATGG GCAGCATGCTTTATACAAGTAGCATGGCGTCGACACTGCAGGAAAAAACTCGAGAATTCC TTAAGAGAGGAAGAAGATAAATTGCAGGTTGCATTAGCTAAAGAGAGCACAAATGCATCA AGTCTTGGATCTATCATGTATGCATCTAGGTTTGCAGCTAATGTACTACGCGCCTTGCGA CACAACAATACAACTGGTACCAGATCATTACCTCTACTGTTTCATAAACCAGCTGAACCA GATTTTAGTGAGAAAAAATGATTCATGAACTAGAAATGTTGGAATATGTTTATATTGGTA GATTTACATTTTCTTTATATTTTAGAAAACAAATCCTTGAGTAGCACATATGCTATATCT TGATTCATTAGGATTCTGGTACATAGAAACACACTGTTCTGTTTCCATTAAACTTCAGGG ACAGTAATGAAATAAACCAGAAGTTACAATGACAGAATGATGTATTTAGAGATGGTCTTA ATTGAACATAATAAAAGGTTAGTCAGGTCATCACCCTTTGCATTCTTTTTGGATTATTTT TTAATCTCTTGTTCTCTTGAAATATATCT