Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g050220.3.1
CDS Infomation

TAF-3 (AHRD V3.3 *** Q40587_TOBAC)
Sequence

ATGGGAAATATTGAGGACAGGAAGTCTTCTACGCCTGAGAAATCATTTTCGACTGCACCA
GATCAAAGCAGTTTTCATGTGTATCCTGATTGGGCTGTGATGCAGGCATATTATGCCCAT
CGAGTAGCTGTACCTCCATATGTTAGTTCTGCTGTTGCACCTGGTCATGCTCCTCATCCT
TATATGTGGGGCCCGCTACCGCCTATGTTTCCACCTTATGGCACACCATATGCAGGAGTC
TATGCACATGGTGGTGTTTATCCGCACTCTGGAGTTCCTATTGTGTTCCGTCCTCAGGCG
CATGGAATGACATCATCTCCCGTTGTTAGCCAAACCAAGAATACTGCTTCTTTGGGTATG
GATACTTCTGCTAAGTCTTCGGGGAACTCTGATCAAGGCTTGACGAGTCAGTCAAAAGGG
TTTGATGGGCTTGGAATCTCAATAGGGAATCACAGTGTTGACAATGGTGCTGGCACTGAC
CATGGACCTTCGCAGAGTGGGCAAACTGAAGGCTCAAGTGACGGAAGTAACATACACACA
ACAGAGATGCGTGAGCACAGTAAGAAAAGAAGCCGCGAGTCAACTCCTAATAACTCTGGT
GAAGGAAAAAGTCAAAGAATGTGCAGTCCACAACGTACTAGGGAAGTAAATGGGGCCTCA
GAGAATGGAATTGGCATAGCTGTTAATCCTGGTATTATAGCAGAAAAGTTAGCGGGAACA
ACATTTTCTCCGATTATGACTACTACTCCACTAGTAAAATCTAGTCCAACTTCACAAATC
TGTCCTGCAATGCCGGGTGAAGTCTGGTTACAGAATGAACGTGAGCTGAAGCGGGAGAAG
AGGAAGCAGTCTAATCGAGAATCTGCAAGGAGATCAAGGTTGAGAAAGCAGGCGGAAGCA
GAAGAATTGGCAGTGCAGGTTCAATCTTTAACCTCTGAAAATTTGGCACTCAGATCAGAA
ATAAACAAATTCACCGAAAACTCTGAGAAACTAAAGTTTGAAAATGTTGGTTTAATGGAG
AGACTAAAAAACAAGCAAGGACAAGCAAAAGAGGTAACTTTAGGTATGATTGATGATAAG
AGGCTGAAGCCTGTTAGCACAGCAGACCTACTAGCAAGAGTCAACAATAACAATGGTTCA
TTCAGTAGAACCAACGAAGACGGTGAAGTTCATGATAGTACCTCTGGAGCGAAGCTTCAT
CAACTCCTTGATGCTAGTTCCAGGACTGATCATGCTGTGGCTGCTAGATGA

Peptide Sequence

PEP ID

Solyc05g050220.3.1
PEP Infomation

TAF-3 (AHRD V3.3 *** Q40587_TOBAC)
Sequence

MGNIEDRKSSTPEKSFSTAPDQSSFHVYPDWAVMQAYYAHRVAVPPYVSSAVAPGHAPHP
YMWGPLPPMFPPYGTPYAGVYAHGGVYPHSGVPIVFRPQAHGMTSSPVVSQTKNTASLGM
DTSAKSSGNSDQGLTSQSKGFDGLGISIGNHSVDNGAGTDHGPSQSGQTEGSSDGSNIHT
TEMREHSKKRSRESTPNNSGEGKSQRMCSPQRTREVNGASENGIGIAVNPGIIAEKLAGT
TFSPIMTTTPLVKSSPTSQICPAMPGEVWLQNERELKREKRKQSNRESARRSRLRKQAEA
EELAVQVQSLTSENLALRSEINKFTENSEKLKFENVGLMERLKNKQGQAKEVTLGMIDDK
RLKPVSTADLLARVNNNNGSFSRTNEDGEVHDSTSGAKLHQLLDASSRTDHAVAAR*

Transcript Sequence

Transcript ID

Solyc05g050220.3.1
Transcript Infomation

TAF-3 (AHRD V3.3 *** Q40587_TOBAC)
Sequence

ATATATATTATATATTTGAAATTTATTTTTCTCTCTAGACAAAGAGAAAGTAATACAAAA
TGCAGAAAGTTTGAGGCAAAAACTGCAAAATTCCATCAATTAAATCTCAATTTAAGTTGG
CATAATAATCTTGGTTAGCATACCTCCAACAACTACTACGCGCAAGTCCCAAACAAGTTG
TTATATTGTTAGTACCTCCTAAAGGAAATAATCATCTCATCAGTGAATTTGTAGAGTGTC
TAGTTGTTTTCTGACACATGGGAAATATTGAGGACAGGAAGTCTTCTACGCCTGAGAAAT
CATTTTCGACTGCACCAGATCAAAGCAGTTTTCATGTGTATCCTGATTGGGCTGTGATGC
AGGCATATTATGCCCATCGAGTAGCTGTACCTCCATATGTTAGTTCTGCTGTTGCACCTG
GTCATGCTCCTCATCCTTATATGTGGGGCCCGCTACCGCCTATGTTTCCACCTTATGGCA
CACCATATGCAGGAGTCTATGCACATGGTGGTGTTTATCCGCACTCTGGAGTTCCTATTG
TGTTCCGTCCTCAGGCGCATGGAATGACATCATCTCCCGTTGTTAGCCAAACCAAGAATA
CTGCTTCTTTGGGTATGGATACTTCTGCTAAGTCTTCGGGGAACTCTGATCAAGGCTTGA
CGAGTCAGTCAAAAGGGTTTGATGGGCTTGGAATCTCAATAGGGAATCACAGTGTTGACA
ATGGTGCTGGCACTGACCATGGACCTTCGCAGAGTGGGCAAACTGAAGGCTCAAGTGACG
GAAGTAACATACACACAACAGAGATGCGTGAGCACAGTAAGAAAAGAAGCCGCGAGTCAA
CTCCTAATAACTCTGGTGAAGGAAAAAGTCAAAGAATGTGCAGTCCACAACGTACTAGGG
AAGTAAATGGGGCCTCAGAGAATGGAATTGGCATAGCTGTTAATCCTGGTATTATAGCAG
AAAAGTTAGCGGGAACAACATTTTCTCCGATTATGACTACTACTCCACTAGTAAAATCTA
GTCCAACTTCACAAATCTGTCCTGCAATGCCGGGTGAAGTCTGGTTACAGAATGAACGTG
AGCTGAAGCGGGAGAAGAGGAAGCAGTCTAATCGAGAATCTGCAAGGAGATCAAGGTTGA
GAAAGCAGGCGGAAGCAGAAGAATTGGCAGTGCAGGTTCAATCTTTAACCTCTGAAAATT
TGGCACTCAGATCAGAAATAAACAAATTCACCGAAAACTCTGAGAAACTAAAGTTTGAAA
ATGTTGGTTTAATGGAGAGACTAAAAAACAAGCAAGGACAAGCAAAAGAGGTAACTTTAG
GTATGATTGATGATAAGAGGCTGAAGCCTGTTAGCACAGCAGACCTACTAGCAAGAGTCA
ACAATAACAATGGTTCATTCAGTAGAACCAACGAAGACGGTGAAGTTCATGATAGTACCT
CTGGAGCGAAGCTTCATCAACTCCTTGATGCTAGTTCCAGGACTGATCATGCTGTGGCTG
CTAGATGATCATAATATTCATGATCATGGCGATGTGGTGCCTAAGTATAAGAAATTTGAC
AGTACAGAAGAGCTTAAGAAATTCTAATTTCGTCTAGTTGTAATTTATCCATAGATGAAG
CTGTGGAGTGTTTTTTTTGGTCCCTTCACTTCAGAGTGTTATGTTGCATGATTGTCTTAT
GTAAATTAGAAACTTGACTGATTGAGAAGAGTTTGGTTTGGATATGTATGGAGCAGTCAA
CAAGTGATCTTTGTGATGTGTTGGGTGTTTGTTTGTCCATTATAGAGGTGATTAGTTGAC
TAAAGTTGAAGTTAAGCCTTAGCTGGCTAGTGCTATGATAATATCCATCATCTTGAAGAA
GAATTTTGGCATCTTGAATTTAACAAGTCTCAGGTTTGAGTCTCCTGGATATGAAGTTGT
TTTTGTTGTGTAACACTTTATTCTGATGTGAATTTGGATTTAGTCGAGTTTCAATGTAGA
TAGGGATGGCATAGTATAAGTTAGGTGTAAGATAATTTTGTATTGGGTTGATTTTAACTC
AATCCAATATAACATATTTTATATTGTACCTGTTGAGTGTATTTTCTACTATTATATAGT
AGCAAATTCTTTGCTTCGTTTGTAAGTAGATTTTTGGTGCTTGCTTTCGTTGTTTTTTTT
TTTAAAAAAAATTAATAATATTATCTCCGTTTAATTTTTGGCATTTTCTCCTTCAATAAA
ATATCTTGGTACTTATAAAAACTGAATATGGGCGGAAAATAGTATTT