Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g049980.3.1

CDS Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4)

Sequence

ATGCACAAAATTCCACTCTCATCTCAAATGGAAAAGACAAGTTGGTTGCTGGTAGTGGTA
TTAGGGATGGTGGTTATAAGTTTACTAGGTGGAGCTGAGGGAAGAAAATCAAGAATTCTT
GATGAGTCTTCTTACTATGATTTAGAGTACTCAGCAATAAGTTGTAGAGCACACAGTGCA
TCTATAACAGATTTTGGTGGAGTTGGTGATGGGAAAACACTCAACACAAAAGCATTTCAA
GAAGCAGTGAATCGGTTGAGCCAGTATGCATCAGATGGTGGAGCTCAGCTTATTGTCCCT
GCTGGTCAATGGCTCACTGGTAGCTTCAATCTTACTAGTCATTTCACTCTTTTCCTTCAT
AAGGATGCTATTCTTCTTGCTTCTCAGGATATAAATGAGTGGGCTGTTATAGACCCATTA
CCATCATATGGTCATGGAAGGGATACATCAGGTGGAAGGTACATAAGTCTTTTATTTGGA
ACTAACCTCACTGATGTTATCATCACAGGTGAGAATGGGACCATTGATGGACAGGGTGAG
ATTTGGTGGCAGAAATTTCACAGCAAAAAGCTAAAATACACAAGGCCTTACTTGATTGAA
ATTATGCATTCTGATAACATTCAGATATCACATATAACCCTTGTCAACTCTCCATCTTGG
AATATCCATCCTGTTTATAGCAGCAATATCATTGTCCAAGGCATCACTATTTTAGCTCCA
GTAAAATCTCCAAACACTGATGGGATCAATCCAGATTCTTGCACAAACATGAAAATTGAA
GACAACTACATTGTATCTGGAGATGATTGTGTTGCAGTTAAAAGTGGTTGGGATGAATAT
GGTATAAATTATGGGATGCCAACAAGTCAACTGATCATCAGGCGCCTCACCTGCATTTCT
CCTTATAGTGCTGCAATAGCATTAGGAAGTGAAATGTCAGGTGGGATTCAAGACGTTAGA
GCAGAGGACATCACGGCTATCAACACTGAATCAGGGGTGAGGATCAAGACTGGTGTTGGC
CGAGGCGGTTTTGTTAGAGATGTATATGTCAAAGGGATGACATTGCACACCATGAAATGG
GTATTTTGGATGACAGGCAACTATGGACAACATGCAGACACTCACTGGGATCCTAATGCA
TTACCAGAGATAAAAGGGATCAATTACCGGGATGTAGTGGCTGAGAACGTGTCAATGGCT
GCTCGTCTTGAGGGGATTTCTGGGGATCCATTCACCGGTATCTGCATTTCAAATGTGACT
ATAAGTATGGCAAAGAAGGCTAAGAAGTATCCATGGACTTGTACTGATATTGAAGGAATT
ACTAGTGGTGTGCAGCCTCCACCTTGTCAGTTGTTGCCTGATCAAGGTCCAGAAAAGACT
GAAATGTGTAGTTTTCCAACAGAGAATTTGGCCATTGATAACATAGAGATGCAAAGATGT
TCCTATAGATTGAATTACTGA

Peptide Sequence

PEP ID

Solyc05g049980.3.1

PEP Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4)

Sequence

MHKIPLSSQMEKTSWLLVVVLGMVVISLLGGAEGRKSRILDESSYYDLEYSAISCRAHSA
SITDFGGVGDGKTLNTKAFQEAVNRLSQYASDGGAQLIVPAGQWLTGSFNLTSHFTLFLH
KDAILLASQDINEWAVIDPLPSYGHGRDTSGGRYISLLFGTNLTDVIITGENGTIDGQGE
IWWQKFHSKKLKYTRPYLIEIMHSDNIQISHITLVNSPSWNIHPVYSSNIIVQGITILAP
VKSPNTDGINPDSCTNMKIEDNYIVSGDDCVAVKSGWDEYGINYGMPTSQLIIRRLTCIS
PYSAAIALGSEMSGGIQDVRAEDITAINTESGVRIKTGVGRGGFVRDVYVKGMTLHTMKW
VFWMTGNYGQHADTHWDPNALPEIKGINYRDVVAENVSMAARLEGISGDPFTGICISNVT
ISMAKKAKKYPWTCTDIEGITSGVQPPPCQLLPDQGPEKTEMCSFPTENLAIDNIEMQRC
SYRLNY*

Transcript Sequence

Transcript ID

Solyc05g049980.3.1

Transcript Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4)

Sequence

GTGAAGAAAAAATACAGTCCATTTCAGAGAATCTTTTACATCAATCCAAACACAGCAATT
GATTATTTCAGTTACAAAATTTTGTCTATATATAATACTAATTCCATACCATATATTTCC
ACCAAGCAATGCACAAAATTCCACTCTCATCTCAAATGGAAAAGACAAGTTGGTTGCTGG
TAGTGGTATTAGGGATGGTGGTTATAAGTTTACTAGGTGGAGCTGAGGGAAGAAAATCAA
GAATTCTTGATGAGTCTTCTTACTATGATTTAGAGTACTCAGCAATAAGTTGTAGAGCAC
ACAGTGCATCTATAACAGATTTTGGTGGAGTTGGTGATGGGAAAACACTCAACACAAAAG
CATTTCAAGAAGCAGTGAATCGGTTGAGCCAGTATGCATCAGATGGTGGAGCTCAGCTTA
TTGTCCCTGCTGGTCAATGGCTCACTGGTAGCTTCAATCTTACTAGTCATTTCACTCTTT
TCCTTCATAAGGATGCTATTCTTCTTGCTTCTCAGGATATAAATGAGTGGGCTGTTATAG
ACCCATTACCATCATATGGTCATGGAAGGGATACATCAGGTGGAAGGTACATAAGTCTTT
TATTTGGAACTAACCTCACTGATGTTATCATCACAGGTGAGAATGGGACCATTGATGGAC
AGGGTGAGATTTGGTGGCAGAAATTTCACAGCAAAAAGCTAAAATACACAAGGCCTTACT
TGATTGAAATTATGCATTCTGATAACATTCAGATATCACATATAACCCTTGTCAACTCTC
CATCTTGGAATATCCATCCTGTTTATAGCAGCAATATCATTGTCCAAGGCATCACTATTT
TAGCTCCAGTAAAATCTCCAAACACTGATGGGATCAATCCAGATTCTTGCACAAACATGA
AAATTGAAGACAACTACATTGTATCTGGAGATGATTGTGTTGCAGTTAAAAGTGGTTGGG
ATGAATATGGTATAAATTATGGGATGCCAACAAGTCAACTGATCATCAGGCGCCTCACCT
GCATTTCTCCTTATAGTGCTGCAATAGCATTAGGAAGTGAAATGTCAGGTGGGATTCAAG
ACGTTAGAGCAGAGGACATCACGGCTATCAACACTGAATCAGGGGTGAGGATCAAGACTG
GTGTTGGCCGAGGCGGTTTTGTTAGAGATGTATATGTCAAAGGGATGACATTGCACACCA
TGAAATGGGTATTTTGGATGACAGGCAACTATGGACAACATGCAGACACTCACTGGGATC
CTAATGCATTACCAGAGATAAAAGGGATCAATTACCGGGATGTAGTGGCTGAGAACGTGT
CAATGGCTGCTCGTCTTGAGGGGATTTCTGGGGATCCATTCACCGGTATCTGCATTTCAA
ATGTGACTATAAGTATGGCAAAGAAGGCTAAGAAGTATCCATGGACTTGTACTGATATTG
AAGGAATTACTAGTGGTGTGCAGCCTCCACCTTGTCAGTTGTTGCCTGATCAAGGTCCAG
AAAAGACTGAAATGTGTAGTTTTCCAACAGAGAATTTGGCCATTGATAACATAGAGATGC
AAAGATGTTCCTATAGATTGAATTACTGATAATAAGCTATCCAAAATGTATCAGCAATAT
AAGTGTAATGAACTATCTGAAATTTTAGTGCTTTCATCTTCACTGTAAACCCTGTAACAT
CCAACAACATGTGCATACAACAGCAGCTACTGCTACACCTCAACTTCAAACAAGTTGGGG
CCGGTTATACGAATCAAACTCTGTTAGTGGTGTCACGGAACAACAGGACGAGTGGTAATA
AGGAAATGACAGTGTCACTCTATTTAAACT