Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g048850.3.1
CDS Infomation

RNA helicase DEAD18
Sequence

ATGGGAATTTACGAAAAGGGATTTGAGAGGCCATCACCAATCCAGGAGGAGAGTATTCCA
ATTGTTCTAACAGGAAGTGATATTTTGGCGAGGGCTAAGAATGGAACTGGGAAGACTGCT
GCCTTCTGCATCCCTGCATTAGAAAAAATTGATCAGGACAACAATGTCATTCAAGTTATT
ATCCTTGTCCCGACTAGGGAATTGGCTCTTCAAACATCTCAAGTTTGCAAAGAACTTGGG
AAGCACTTAAAAATTCAAGTCATGGTTTCCACTGGGGGGACCAGCTTAAAAGACGACATA
ATGAGACTGTATCAGCCAGTGCATTTGCTTGTTGGAACTCCTGGAAGAATACTTGACCTT
GCAAGGAAAGGAGTGTGTGTTTTGAAAGATTGCTCCATGCTTGTCATGGATGAGGCTGAT
AAGATGCTATCACCAGAGTTCCTACCTTCCATTGAGCAGCTGATCCGCTTCTTGCCTGCA
AGTCGGCAGATATTAATGTTTTCTGCTACATTTCCTGTTACAGTCAAGGCCTTCAAAGAT
AGATACTTGCAGAAGCCTTATGTTATCAACCTTATGGATGAACTTACACTCAAGGGTATT
ACCCAGTTTTATGCTTTTGTTGAAGAAAGACAGAAGCTTCATTGCCTTAACACTTTGTTC
TCAAAGCTTCAAATAAACCAGTCTATAATTTTTTGCAACTCTGTAAATCGTGTAGAACTT
CTTGCCAAGAAGATCACGGAACTGGGTTATTCATGCTTCTATATACATGCGAAGATGCTT
CAAGATCATAGGAACAGGGTTTTTCATGACTTCCGCAATGGTGCCTGCAGGAACCTCGTC
TGTACTGATCTGTTTACTAGAGGGATAGACATTCAAGCAGTCAATGTTGTTATCAACTTT
GATTTCCCAAAGAACTCAGAAACATATTTACACAGGGTTGGGCGGTCTGGGAGATTCGGT
CACCTGGGTTTAGCTGTCAACCTAATTACTTTTGAGGATCGCTTCAATTTGTATAGAATT
GAACAAGAGCTAGGAACCGAGATTAAGCAAATTCCGCCACATATAGACCAGGCTGTGTAT
TGCGGGTAA

Peptide Sequence

PEP ID

Solyc05g048850.3.1
PEP Infomation

RNA helicase DEAD18
Sequence

MGIYEKGFERPSPIQEESIPIVLTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVI
ILVPTRELALQTSQVCKELGKHLKIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDL
ARKGVCVLKDCSMLVMDEADKMLSPEFLPSIEQLIRFLPASRQILMFSATFPVTVKAFKD
RYLQKPYVINLMDELTLKGITQFYAFVEERQKLHCLNTLFSKLQINQSIIFCNSVNRVEL
LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF
DFPKNSETYLHRVGRSGRFGHLGLAVNLITFEDRFNLYRIEQELGTEIKQIPPHIDQAVY
CG*

Transcript Sequence

Transcript ID

Solyc05g048850.3.1
Transcript Infomation

RNA helicase DEAD18
Sequence

ATGTGTTGGCAAATCTTTGGACGTTGGGCAAAGGAAACTTGGCGTCTTTCCTGTGAAAGA
GGTGACTATTTGCAGGTGTTTGTGAGGTTGCGTTGGTTCGCAATATTTGGATGTTGGGCA
GATGCAGGGGAACTTGGCATCTGTCCAGTGAAAGTGGTGAATATTAGCAGTTCTTTTCTA
TCAACCTTGTTATTTCCTTGTCTGACAACTCTGAGCCACTCTGTAGATATTTGGACTAGA
ATTGAGAAACAAACAAAACCAGCAATATACTTTATTAGTATGGGAAAAAGAAGTAAGACT
TCCATCACCAAGTTTAACTCAGACGTAAACCCCTTGGTTCTTCAACATTAGTCAGTTTGG
GAAGAGCAGTTTCAAACCAAAATACTCATCTCCAATTTGTCAACTATTACCAGGTATCTG
CTATAAGCCTCTACTCACTTGAACCTCACCCTTCCCTTTTAACTTCTAAGGATGTGACAG
CAACCAAGGGAAACGATTTCGAAGACTATTTTCTAAAGCGTGAACTGCTTATGGGAATTT
ACGAAAAGGGATTTGAGAGGCCATCACCAATCCAGGAGGAGAGTATTCCAATTGTTCTAA
CAGGAAGTGATATTTTGGCGAGGGCTAAGAATGGAACTGGGAAGACTGCTGCCTTCTGCA
TCCCTGCATTAGAAAAAATTGATCAGGACAACAATGTCATTCAAGTTATTATCCTTGTCC
CGACTAGGGAATTGGCTCTTCAAACATCTCAAGTTTGCAAAGAACTTGGGAAGCACTTAA
AAATTCAAGTCATGGTTTCCACTGGGGGGACCAGCTTAAAAGACGACATAATGAGACTGT
ATCAGCCAGTGCATTTGCTTGTTGGAACTCCTGGAAGAATACTTGACCTTGCAAGGAAAG
GAGTGTGTGTTTTGAAAGATTGCTCCATGCTTGTCATGGATGAGGCTGATAAGATGCTAT
CACCAGAGTTCCTACCTTCCATTGAGCAGCTGATCCGCTTCTTGCCTGCAAGTCGGCAGA
TATTAATGTTTTCTGCTACATTTCCTGTTACAGTCAAGGCCTTCAAAGATAGATACTTGC
AGAAGCCTTATGTTATCAACCTTATGGATGAACTTACACTCAAGGGTATTACCCAGTTTT
ATGCTTTTGTTGAAGAAAGACAGAAGCTTCATTGCCTTAACACTTTGTTCTCAAAGCTTC
AAATAAACCAGTCTATAATTTTTTGCAACTCTGTAAATCGTGTAGAACTTCTTGCCAAGA
AGATCACGGAACTGGGTTATTCATGCTTCTATATACATGCGAAGATGCTTCAAGATCATA
GGAACAGGGTTTTTCATGACTTCCGCAATGGTGCCTGCAGGAACCTCGTCTGTACTGATC
TGTTTACTAGAGGGATAGACATTCAAGCAGTCAATGTTGTTATCAACTTTGATTTCCCAA
AGAACTCAGAAACATATTTACACAGGGTTGGGCGGTCTGGGAGATTCGGTCACCTGGGTT
TAGCTGTCAACCTAATTACTTTTGAGGATCGCTTCAATTTGTATAGAATTGAACAAGAGC
TAGGAACCGAGATTAAGCAAATTCCGCCACATATAGACCAGGCTGTGTATTGCGGGTAAA
ATTGATCATTTGCATGGTCAAATACTTTTCTAGATGGTGAGTCTTTAATGACGAGGTGCT
TCATGCACACAGTTTGTCTAAGTGCTGAGCTGAGCTACCCGAGAATCTAGTTTTTCCATG
TATACTTGAGTGCATCTTTCGACAACTTTAATTGTCCAGTAGTGTTAGTAGTTAGTTTTA
CTGGCATTGAAGATGGTTGGCACATCTTGCATAAGTTATGTCTTATTGCTTTGAATATCT
TCCCCAAACATAAGGAGAGAGGATGGGGAGATATTTTTTTAACACATGCTTTCATGAAAT
TGTCAGTATTTTCTGTTTGAAAATATGTGACCTCTAAGAGTCTAAAAGAATGAGAGACTT
GGGTGTTTCATGGTTGCTGAGATGACAAAGTGAATTGTAGATCTTTGGCTCCTAACTTCC
TTTTAGATGATGCAAAAGAATTTAATGGCAGATATTGACACTGGAAGGGTCTGTTCATTG
ACCGACTATCCTTTGCTGAGCTCTGGGATCTGTAGTGTGTGGCATTCATAGTTGTTTTAT
TCTTGTGGCTGTAGAACAAAGCTGTCGAAATTACTCTGTTAGTTTTTCCACCTTATGGTC
ATTGACAACATGGCATTGACGTAGAGATTGTCATGGAGATACATTATTATGTCAAACATG
TCGAGTTGTAGAACATTCTTTAATGGTGAAATGACCTGAGACATTCAAGTGCAGCTTCAG
TATTTACCAGCTTTTGTAATTTATAGCCTATTGCCCTGTGTTAGAAGGGGAATTTCATTT
TTCTGTGGTTGTTTCTACTTTTAAGTTAGGTTTTTTCGAAATATAAAGAGGTGTTTGTAT
CCATGAATGAGTATATTTGGCTTTGCTGATGCGGAGAATATGATCGTATATTAGCCAATA
GTAGTAGTATATGTTGGATGTATTCAATGGAGAGTGTGTTAGCAGGTCTGTTTTCCTAGG
CCCTTCAAAGTGAACATATTGTTACTGAGGAAATCATCTTGTTGCAGAAATGAGGTGTTG
TGTGTCATTGCTGATCATTTAGTTTCTGAATATTTTTCCTTTGTTATTTCTCTTTTTAAC
TATTTTTTATTTGAGTTCTGTGGAATTAGCAATCTTTTTGTTACTGGACTTGTATTTCTT
TCTTGTGGTTATTGAAGGTAAAAATTGGTAAAAGTTAAGCAAATCTATAAGAAAGAAATT
TTCTTTCTATCCCTACTCTTTCATTAATTACTAAAAGTTCTCTTTTTTAGTGTTTTTCCG
ATACATAATATTGTAAGCAAATACATTAATTAATAACGATTGATACTTAAATTATTAAGT
TGTTGTTATCAGTTTGAGCATTGAATAAGTGATTAAAAACAGAAATTAATTGATTTCCAC
TAATCACTCGTACGTTTCTTCC