Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g048750.3.1
CDS Infomation

coiled-coil protein (AHRD V3.3 *-* AT2G45520.1)
Sequence

ATGGCCTTTTCAGGGGATGGGAAAGGTTCATTGGATAATGCAGACAGGAAGAAAGGAGAT
AGTGGTGGTAGTGCTAATGGAAAGAGGATACATTCAGACAATCAAGTTCAAGCTAAAACT
GTGGGTAACAAACGGAAAGATGACAAAAGCAGTTTGAGTGGTGTTGGAGATGAAGAAAGT
AATGCACATCAGAAGAGAAATAAAAAGAGAAAAAGGAAGGAAGTGAAGGACCTTCGGTTT
GATACAACTGAACTGGGCATTACTAGTTCAAAGAGAAAGGAGCGAAAGAAACAGCGTTTG
GCAGAAATGAAGAAGAAACATAAAAAGGCCAATACTGATGAACACATGGATTTTCCTGGC
CGTGAAGAAATAAAATTTGGTGAAGTCGTTGAAGCTCCACCTAAGCTTGCAGTTCCAAAG
GCATTCAAGAGTAATGCACATGATGCTTCAAAAGAAAGACTTCGATTGCAAGCAGTTGAG
GCCTATAGGCAGCGGAAAGGATGGACATCAAGACTCGGGCTTCAGATTTCTCCACCAATC
ACCGAGACTCCATTGTTGTAG

Peptide Sequence

PEP ID

Solyc05g048750.3.1
PEP Infomation

coiled-coil protein (AHRD V3.3 *-* AT2G45520.1)
Sequence

MAFSGDGKGSLDNADRKKGDSGGSANGKRIHSDNQVQAKTVGNKRKDDKSSLSGVGDEES
NAHQKRNKKRKRKEVKDLRFDTTELGITSSKRKERKKQRLAEMKKKHKKANTDEHMDFPG
REEIKFGEVVEAPPKLAVPKAFKSNAHDASKERLRLQAVEAYRQRKGWTSRLGLQISPPI
TETPLL*

Transcript Sequence

Transcript ID

Solyc05g048750.3.1
Transcript Infomation

coiled-coil protein (AHRD V3.3 *-* AT2G45520.1)
Sequence

CTAAAGTCACTTCTCTCACTCCTCTCTCACGCCCAGCATCCTCGACCCATTCCTGACCGG
CGCCACGCCACGTTCTCCGACCGGCGCCGTCTCAGCAGCAGCAGAGGGCGGCACAGCAGC
AGCGGCAATCTTGGTAAGTTTTAAATTTTCCATTTGCTCATCAACGATTTGAAAAAGTTT
AGGAATATCGCCAAACAAAAAGGAGAACTCCAACTTATGCATTGACTTGTTTCAAGACTA
AATACCAATATTGATTGTTGATATTAACTTGTCTGATTATCTAAAAGAATTAATGTATGT
GGGGTTTGCTGCTTCTAGTGAGGGGAGTACTGAATTGCATAGTATTGAGAATTGGAGTTT
TCGAACTTATGGATTTGTCCCTGTGAGGCATCCTCATAATGTTTCTGATGATACTGTGAT
TGTAAAGCCTCCGATTATTCAAAAGTCTGGCCATAAACATAATAATAAGAGTCTTCGGTT
GGTTTTTGAATTGGTGGTCCAGCTTTCCTTTGTGATGTTCTTGTAGATTTTTGTTGGATT
TCTGTCGAGAAATGGTGAAATTTGCACAAGTAACAAATCTGTAACAACAAAACAATGAAA
ATAAATCCAAGAAACATTGATCAATTGAATATAGGAGAAACCTATTTTGAATTATCAAGA
AAAAGAAAAAACAACACAAACTTGTTTACTAATTGTCAATTGTTAATAATGACTGAAATC
TCTCCATAATGACCACTTAAGAAATTTTAAATTGTTCCTTTTCGTGCTAGGCAATTGAGG
AATCTCAACATTTAAAAAAGTTGATACAAGACTTTACTCCTTTCATCAAAGTAGGAGATA
AGGGTTTAATTGTAATTAATGCTTCCTGCTTCAACGTTGTAAAGAGTGCGAGGGTTTAAC
GAATTACAGCGTCGACACAGATAAGAAGAAGAAGAAGCAAAAATGGGAGGTAAAGGGAAG
AAGAGAAGAGAGAAGAATTACAGGGCAGCTCATGGAGGCACTACTAGACTTCCTCCCCCA
CCCAACACCTCTTCTATTGATGCCATTCCCTCCAAGCTCCGTCAAATTATGGCCTTTTCA
GGGGATGGGAAAGGTTCATTGGATAATGCAGACAGGAAGAAAGGAGATAGTGGTGGTAGT
GCTAATGGAAAGAGGATACATTCAGACAATCAAGTTCAAGCTAAAACTGTGGGTAACAAA
CGGAAAGATGACAAAAGCAGTTTGAGTGGTGTTGGAGATGAAGAAAGTAATGCACATCAG
AAGAGAAATAAAAAGAGAAAAAGGAAGGAAGTGAAGGACCTTCGGTTTGATACAACTGAA
CTGGGCATTACTAGTTCAAAGAGAAAGGAGCGAAAGAAACAGCGTTTGGCAGAAATGAAG
AAGAAACATAAAAAGGCCAATACTGATGAACACATGGATTTTCCTGGCCGTGAAGAAATA
AAATTTGGTGAAGTCGTTGAAGCTCCACCTAAGCTTGCAGTTCCAAAGGCATTCAAGAGT
AATGCACATGATGCTTCAAAAGAAAGACTTCGATTGCAAGCAGTTGAGGCCTATAGGCAG
CGGAAAGGATGGACATCAAGACTCGGGCTTCAGATTTCTCCACCAATCACCGAGACTCCA
TTGTTGTAGTTATCTCAGAAACAACTAGTTGGATGGGTGCCATGCAAAATATCTACAGTA
AGTATAAGGCTCTAGCAACTCAAAGATGTGTTTGAGCATGGGGGGTTCTGATTGAGAACA
CACTTGAAGAGTTGTTTAGTTCTAAGTTTACTACTTCACTCATTGTGTATGTGCAACTGC
TTTACGACTGATGTGTGTAATGAGTCAAGTAAGCAGCTAGACCATCCTTCATGTTTTGTG
CAATATTTACTAATTGGTATGCAATTCGAAACACATGTCCTAGTTTCAGGCACCTGGCTA
TGCATCACATATGCTCCCTGCCCATTGTGTGATTTCTGTACATATTCTGCCTTTGGCCTA
TTGAATGATGACAGTGCGTGCACCATTTCTCCTAGATCATCTTTGCTGAATCTGAACATT
ACGTATCATATGGTTCATTAATTAAATTGTTAGTTGCTTTCTGATATATGACCTTTTTCT
TCCTGCAAGTGTAGAAAAATGAGGAAGAAGGATCTGTAGTTCAGCAGGAAGAATGACTTG
TCTTCAAGTCCTCGTCATGTTGCTAGCTGAGATCCTGCCAGAAATTTCGGAATATATCTG
AATCTTATCGCATTATGTAACGACTCTTTCGCAGTTTTACCATAGGCTACTTAAAACACA
GCAGCACTTCATAATCTTGTCCATCCAACAAACAAATTGGATGGACGATATGTCATGTTA
TTCATTTTCCATTGCTATATTGTTGCCGAAATTCTCCACAACGATATTCGGAGTCCCACA
GTTGTATGAGTTACCTTCATTACT