Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g044480.3.1
CDS Infomation	RNA helicase DEAH-box16
Sequence	ATGAAGCTCCGTTCTCGTCCTTCTTCGTCTTCGGCCAAAGGAAAACAGCGCCGCCAATAT CAGGACAGCTCTGATGAGGATTACCTTCTTTCTATGTCCTCGGATTCTGATTACATTGGA AGCAGTGATGAAGATGTAGCTGATGAAGTGGTTAATTTAACTGAGGAAGTGGTATATTCC AATAGAAGAAAAAGAAATCGGGGCAAAAAGAAGATTGAAACAAAAGAAGATCATGGAGAA GAAGAGGAAAATGTAGATTGGGTAATGAATGAAGTAGGAGGGGGTGGTGAAGTAGATGCT GGCTACCTTCAATTGATAGGGAGGATAGAGGATAGGAAGAAGATTCGTGTAAAGAATCAA AAGAAGAGACCCACTTTGCTGTGGGAGATCTGGGAAGAAGAAAACGATAGTTGGATGGCT GAAAACTATCCAAATGATCCTCACTTCAATAGTCAGGATGAGTTGGTAACTGAAACTGCT CAGCCACCATCTGATTTGATCATGCCCTTGCTGAGGTACCAGAAAGAGTGGTTGACTTGG GCGTTGAAGCAAGAAGAATCTACTGCTAGAGGCGGTATTCTTGCTGATGAAATGGGGATG GGGAAAACTGTTCAAGCCATAGCTCTTGTGCTTGCTAAACGCGAAATAGGGCAAGCAATT TCTGGTTCCAGTTTGCTCTCACCTGCCCCTTGTACTTCCCAGCAGCTCCCTGTAATGAAA GGAAGCCTAGTCATATGTCCCGTTGTTGCTGTGATTCAGTGGGTCAGTGAGATTGACCGT TTCACCACTAAAGGAAGCAACAAAATTTTAGTTTATCATGGCACTAACAGGGTGAAGAAT ATTGACAAATTTGCAGAATATGATTTTGTCATCACTACATATTCCACAGTGGAGGCTGAG TACCGGAAAAATGTGATGCCACCAAAAGAAAAATGTCAGTGGTGTGGAAAGTCTTTTTAT GAACAAAAGCTTTCTGTTCACCAGAAGTACTTTTGTGGACCAGATGCTGTTAAAACGGCT AAACAATCAAAGCAGCAGAGCAAGCCTGGAGGAAAACCGTCAAAGCTGAAAAAGGATCAT ATTGAAGGTGATTCAAAGATTAATACGGGTAAAAGAGGCAGTGGCAAGGGAATAAAGCGC AAAAGCGAGGCTGATGCTGGTTGTGTTGATGATTTAGCCTTTGCTGGTCAAGATATGTCC ACGAGGAAGTCAATTTTGCACTCTGTGAAATGGAATCGTATCATTTTGGATGAGGCCCAT TATGTAAAAGATAGACGCTCCAACACTACAAGAGCTATTCTTGCGCTAGAATCTTCTTAT AAGTGGGCCTTAAGTGGTACTCCCCTCCAGAATCGTGTAGGAGAGCTATACTCACTTGTG CGTTTCCTGCAAATCGTTCCTTACTCGTACTACTTCTGCAAAGATTGTGATTGCAGAGTT TTGGACTATAGCTCATCCGAGTGCCCACATTGCCCCCACAAATCTATTCGGCACTTCTGC TGGTGGAACAGATATATTGCCTCACCCATACAGAATCAAGGGAATCGTGGGACTGGTAGA GATGCAATGGTTTTGTTGAAACACAAAATTTTGAAAAGCATATTGCTGAGACGTACTAAA AAGGGAAGGGCTGCTGATCTTGCACTTCCTCCAAGGATTGTTACTTTGCGGAAAGATTCT TTGGATGTTAAAGAAGAAGACTACTACACATCACTGTACAATGAAAGCCAGGCACAATTT AATACATACATTCAAGCTGGTACTTTGATGAATAACTATGCTCACATTTTTGATCTGCTC ACACGCCTGCGACAGGCAGTTGATCATCCTTACCTTGTGGTATACTCAAGTACTGCTTTG GCTAGAAGAGGAAGCACAAATGATGCCGGCTCTGTTGAACAACTATGTGGTTTATGTCAT GATCCAGTAGAAGATCCCGTTGTTACCTCTTGCACACATATCTTTTGCAAGTCATGTCTA ATAGATTTTTCTGCAAGTGTGGGACAAGTTTCATGCCCTTCATGTTCTGAACCACTTACA GTGGATTTCACGGCAAATGATAAGGGGGATCAGAAATCTAAAGCTACTATCAAAGGGTTT AGGTCCTCAAGTATACTGAACAGAATTCATCTTGATAATTTCCAGACAAGCACAAAAATA GAGGCTTTGAGAGAAGAAATAAGGTTCATGATTGAAATAGATGGTTCTGCGAAAGCAATA GTCTTCAGTCAATTCACATCATTTTTGGATCTGATACACTATTCTCTACAGAAGTCGGGC GTCAGTTGTGTTCAATTAGATGGATCCATGTCTATGACTGCCAGAGATTCTGCAATTACA AGATTCACCGAGGATCCAGATTGCAGGATATTCCTTATGAGCTTGAAAGCTGGAGGTGTT GCCCTCAATCTTACAGTGGCATCACAAGTTTTCTTGATGGATCCTTGGTGGAATCCTGCT GTGGAGCGGCAAGCCCAAGATAGAATCCATCGAATAGGGCAGTATAAACCAATCAGGATT GTGAGATTTGTGATTGAGAATACAATCGAAGAGAGGATCTTAAAGTTGCAAGAGAAAAAG GAGCTAGTATTTGAAGGGACGGTTGGTGGCTCTTCTGAGGCCTTGGGGAAACTAACAGAG GCAGATTTGAAGTTCTTGTTTGTAACCTAA

Peptide Sequence

PEP ID	Solyc05g044480.3.1
PEP Infomation	RNA helicase DEAH-box16
Sequence	MKLRSRPSSSSAKGKQRRQYQDSSDEDYLLSMSSDSDYIGSSDEDVADEVVNLTEEVVYS NRRKRNRGKKKIETKEDHGEEEENVDWVMNEVGGGGEVDAGYLQLIGRIEDRKKIRVKNQ KKRPTLLWEIWEEENDSWMAENYPNDPHFNSQDELVTETAQPPSDLIMPLLRYQKEWLTW ALKQEESTARGGILADEMGMGKTVQAIALVLAKREIGQAISGSSLLSPAPCTSQQLPVMK GSLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGTNRVKNIDKFAEYDFVITTYSTVEAE YRKNVMPPKEKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKPGGKPSKLKKDH IEGDSKINTGKRGSGKGIKRKSEADAGCVDDLAFAGQDMSTRKSILHSVKWNRIILDEAH YVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRV LDYSSSECPHCPHKSIRHFCWWNRYIASPIQNQGNRGTGRDAMVLLKHKILKSILLRRTK KGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIFDLL TRLRQAVDHPYLVVYSSTALARRGSTNDAGSVEQLCGLCHDPVEDPVVTSCTHIFCKSCL IDFSASVGQVSCPSCSEPLTVDFTANDKGDQKSKATIKGFRSSSILNRIHLDNFQTSTKI EALREEIRFMIEIDGSAKAIVFSQFTSFLDLIHYSLQKSGVSCVQLDGSMSMTARDSAIT RFTEDPDCRIFLMSLKAGGVALNLTVASQVFLMDPWWNPAVERQAQDRIHRIGQYKPIRI VRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFVT*

Transcript Sequence

Transcript ID	Solyc05g044480.3.1
Transcript Infomation	RNA helicase DEAH-box16
Sequence	CGCCGCACAAATGTCTTACTCAACACAACAACATTCTCTCTCTCTTCGGGTGAAGAGATA CACTGTTCACACTACTACTACTGTTGAGTGTTTTCTCACCCCTTTTCTCTGCAAAACCCT AATCAATGAAGCTCCGTTCTCGTCCTTCTTCGTCTTCGGCCAAAGGAAAACAGCGCCGCC AATATCAGGACAGCTCTGATGAGGATTACCTTCTTTCTATGTCCTCGGATTCTGATTACA TTGGAAGCAGTGATGAAGATGTAGCTGATGAAGTGGTTAATTTAACTGAGGAAGTGGTAT ATTCCAATAGAAGAAAAAGAAATCGGGGCAAAAAGAAGATTGAAACAAAAGAAGATCATG GAGAAGAAGAGGAAAATGTAGATTGGGTAATGAATGAAGTAGGAGGGGGTGGTGAAGTAG ATGCTGGCTACCTTCAATTGATAGGGAGGATAGAGGATAGGAAGAAGATTCGTGTAAAGA ATCAAAAGAAGAGACCCACTTTGCTGTGGGAGATCTGGGAAGAAGAAAACGATAGTTGGA TGGCTGAAAACTATCCAAATGATCCTCACTTCAATAGTCAGGATGAGTTGGTAACTGAAA CTGCTCAGCCACCATCTGATTTGATCATGCCCTTGCTGAGGTACCAGAAAGAGTGGTTGA CTTGGGCGTTGAAGCAAGAAGAATCTACTGCTAGAGGCGGTATTCTTGCTGATGAAATGG GGATGGGGAAAACTGTTCAAGCCATAGCTCTTGTGCTTGCTAAACGCGAAATAGGGCAAG CAATTTCTGGTTCCAGTTTGCTCTCACCTGCCCCTTGTACTTCCCAGCAGCTCCCTGTAA TGAAAGGAAGCCTAGTCATATGTCCCGTTGTTGCTGTGATTCAGTGGGTCAGTGAGATTG ACCGTTTCACCACTAAAGGAAGCAACAAAATTTTAGTTTATCATGGCACTAACAGGGTGA AGAATATTGACAAATTTGCAGAATATGATTTTGTCATCACTACATATTCCACAGTGGAGG CTGAGTACCGGAAAAATGTGATGCCACCAAAAGAAAAATGTCAGTGGTGTGGAAAGTCTT TTTATGAACAAAAGCTTTCTGTTCACCAGAAGTACTTTTGTGGACCAGATGCTGTTAAAA CGGCTAAACAATCAAAGCAGCAGAGCAAGCCTGGAGGAAAACCGTCAAAGCTGAAAAAGG ATCATATTGAAGGTGATTCAAAGATTAATACGGGTAAAAGAGGCAGTGGCAAGGGAATAA AGCGCAAAAGCGAGGCTGATGCTGGTTGTGTTGATGATTTAGCCTTTGCTGGTCAAGATA TGTCCACGAGGAAGTCAATTTTGCACTCTGTGAAATGGAATCGTATCATTTTGGATGAGG CCCATTATGTAAAAGATAGACGCTCCAACACTACAAGAGCTATTCTTGCGCTAGAATCTT CTTATAAGTGGGCCTTAAGTGGTACTCCCCTCCAGAATCGTGTAGGAGAGCTATACTCAC TTGTGCGTTTCCTGCAAATCGTTCCTTACTCGTACTACTTCTGCAAAGATTGTGATTGCA GAGTTTTGGACTATAGCTCATCCGAGTGCCCACATTGCCCCCACAAATCTATTCGGCACT TCTGCTGGTGGAACAGATATATTGCCTCACCCATACAGAATCAAGGGAATCGTGGGACTG GTAGAGATGCAATGGTTTTGTTGAAACACAAAATTTTGAAAAGCATATTGCTGAGACGTA CTAAAAAGGGAAGGGCTGCTGATCTTGCACTTCCTCCAAGGATTGTTACTTTGCGGAAAG ATTCTTTGGATGTTAAAGAAGAAGACTACTACACATCACTGTACAATGAAAGCCAGGCAC AATTTAATACATACATTCAAGCTGGTACTTTGATGAATAACTATGCTCACATTTTTGATC TGCTCACACGCCTGCGACAGGCAGTTGATCATCCTTACCTTGTGGTATACTCAAGTACTG CTTTGGCTAGAAGAGGAAGCACAAATGATGCCGGCTCTGTTGAACAACTATGTGGTTTAT GTCATGATCCAGTAGAAGATCCCGTTGTTACCTCTTGCACACATATCTTTTGCAAGTCAT GTCTAATAGATTTTTCTGCAAGTGTGGGACAAGTTTCATGCCCTTCATGTTCTGAACCAC TTACAGTGGATTTCACGGCAAATGATAAGGGGGATCAGAAATCTAAAGCTACTATCAAAG GGTTTAGGTCCTCAAGTATACTGAACAGAATTCATCTTGATAATTTCCAGACAAGCACAA AAATAGAGGCTTTGAGAGAAGAAATAAGGTTCATGATTGAAATAGATGGTTCTGCGAAAG CAATAGTCTTCAGTCAATTCACATCATTTTTGGATCTGATACACTATTCTCTACAGAAGT CGGGCGTCAGTTGTGTTCAATTAGATGGATCCATGTCTATGACTGCCAGAGATTCTGCAA TTACAAGATTCACCGAGGATCCAGATTGCAGGATATTCCTTATGAGCTTGAAAGCTGGAG GTGTTGCCCTCAATCTTACAGTGGCATCACAAGTTTTCTTGATGGATCCTTGGTGGAATC CTGCTGTGGAGCGGCAAGCCCAAGATAGAATCCATCGAATAGGGCAGTATAAACCAATCA GGATTGTGAGATTTGTGATTGAGAATACAATCGAAGAGAGGATCTTAAAGTTGCAAGAGA AAAAGGAGCTAGTATTTGAAGGGACGGTTGGTGGCTCTTCTGAGGCCTTGGGGAAACTAA CAGAGGCAGATTTGAAGTTCTTGTTTGTAACCTAAATTAGATTATGTTCTGTAACTTGGT TCAGCAAGAAAGATCATTTGATCTTTGTTTAGTTTCTTGCTTGAATCTTATCCCTAGTAT TGTTTTTGCAAAGTAGCAAAGTCAATCCTCTTCTGTTGGTTTTACTAACCTTAACTTTAT CATCATATGTTGGAATTTTCAAATATTGTTCCAACATTTACTTTAT