Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g040050.2.1
CDS Infomation	DnaJ domain-containing protein (AHRD V3.3 *** A0A103YK36_CYNCS)
Sequence	ATGAGTGTTCCATTTCTATTAGCTCTTTCTATATCATCTAGGCGAGCAAATTCTTTATTA CACCTTCGTAAATGTGTTCTTAGTCGTCCCGTTCCCCCTTGCGTGCATAAGAATGTTCCA ACTGTAATTCGCTGTGAGATTCCTAAAGATTTGTTGGTGGATAAAGTTGTGGTTTTTGAG ATGGAGAAAAATGTAGAGGAAGCACTACAAGCTAAAGCAAATGCCGAAAGGAAATTTGCG GAGAGAGATTTTGTGAGTGCAAAAAATTATGCTTTAAGAGCTCAGATGCTGTGTCCTCAG TTGGATGGCATATCACAAATGGTAGCGACATTTGGTGTTCACAGTGCTGCAGAGATAAAG GTTAATGGAGAACTTGATTTCTACACGATACTGGGTATGGATCCATCTGCAAACAGGGCT AAGCTGAAGAAACAATATAAGAGGATGGCTGTGTTACTCCATCCTGATAAGAACAAAAAT GTAGGAGCTGATGGTGCGTTTAAGTTTATTTCTGAAGCATGGACTGTTTTGTCTGATCGT GCTAAAAGAAGTGCTTATGATCAGAGGAGAAATTTATTTACTCTGCATACTTCTGGTGTT GGCAACTATGCTAATTACTCCAACACCCCAGCTTCTCATGGAAGGCTCGATACATTTTGG ACTGTTTGTACCTCTTGTCAGGTTCAATATGAATATCATAGGAAATATGTGAACAAAAGG CTGTCTTGTAAGAACTGTCGTGGGGTTTTCATAGCTGTTGAAACTGGATTGGCCCCTGTA AATGGTTCCTATGCATTTAGCCCTTGGCCTTATGTGCCTGAGAATGGATACAAAAGCCAT GGTTGTGGGGTTACGTATGTTCCAACATCGCCTGCTTATTCTGCAAATAGTAGGGTCACA GGACATCATTCTAAGCATGGTTCGGAGCATGCTTCCAATTTATCCTTTCAGTGGAGCTCC TTCCCTGGAACTTCTGCCGGAGTTGTAGATCCAAATGGTTCATCCACTGGCTTCAGTTTT ATCCAGCAGACAAATTCGAAAGCCTCTGGAAAAAAAGCTAATGGGAAGCAAGAACTAACC AAAACAGTTGCTGATGGGTCTGTGCGTAGTGATCAACTGCCCCGCAGGCCTGGTAGGCCT CCTAAGAAGAGAAAAATTGATTTGGAGAGTACAAATGGTTATGGTAATGGTGATGTGGCT TCAAACGCTGCTGCAGAAGTCATAATGGCAGATGGAAACGGGAGTGAGAGTTTGAAAAGA AATGCTAAGCTTCCTACTCCGGAAGTTCCAATCCGAAGATGGCCTACGGCTCCTGCATTT GATCCAAGACCGTTGTTAATTGACAAGGCAAGAACAGATATCCGCAAGAAACTGGAAGAG ATCAGGTTGGATGCTGTAGAGTCCGAGAAAAAGAGAAAGGCACATGCTCAATTTGGTGAA TCGAGTGAAAGACCTAAAAGAGAAGGTCTTGGTCTTACTGCTCATCAATCGGATATGAGG AAAACTGGGTCCATGAGTTTGACTGTCCCAGACTCTGACTTCCATGATTTTGACAAGGAT AGATCAGAGGATTGCTTCATGCCAAAGCAGATATGGGCTTTATATGATGAGGAAGATGGT ATGCCTCGCTTGTATTGTCTGATCCGCCAAGTTATCTCGGTGCAGCCCTTCAAGGTTCAT ATCAGCTACTTAAGTTCAAAAACAGATAGTGAATTTGGGATAGTCAATTGGTTGGATTCT GGTTTTACCAAGTCATGTGGAAAATTTAGGGCCTTTAACTCTGAAGTTATTGAACAAGTC AACATATTTTCTCACCTTCTAGGTGGGGAGAAGGCTGGAAGAGGAGGGTGTGTTCAGATT TACCCAAAAAGGGGAGACATTTGGGCCATTTATCGAAATTGGTCGCCAGATTGGAACAGG AAAACCCCAGATGAAGTGAGGCACCAGTATGAAATGGTGGAGGTCCTTGGTGATTATTCT GAAGATTTTGGTGTTTGCATTGCTCCTTTGGTCAAATTAGATGGATTCAAGACAATATAC CGACGAAACACGAATCAGGATGCCATTCGGAAGATTCCCAGAAGAGAAATGTTGCGATTT TCACATCAAGTGCCATCTTGTTTACTGAAAAGAGAAACAATGAACTTGCCGGAGGGGTGC TGGGAGCTCGACCCTGCTGCTACTCCAGATGATTTGCTTCAAGGGGTACATGACGTACAG GAGGAAAGACCTATTCAAACTAAAAGGTCTTCAGGAGTTGATCTAGACGAGATGTCTCAG GCTGAAACCAGAATATTGGCTGAACAAGATCTTAGACAACGAGAGTACTCTGCTGTTCCT GATATGTTCGATGAGGCTACACCTGGCTTGGAGATTCAAGAAAACTCGAATGAACATCAA ACTCTGTTCAGACCATCCACCGAGCTTCCTCAATCTGCAAGGCAAGCTCATTCTTTTGAG GAACCCAGCAAAATGCACAATCACAGTGCTACAACACCAGGTGAGCATCCGCGAGCTGTG ATGAATGAATAG

Peptide Sequence

PEP ID	Solyc05g040050.2.1
PEP Infomation	DnaJ domain-containing protein (AHRD V3.3 *** A0A103YK36_CYNCS)
Sequence	MSVPFLLALSISSRRANSLLHLRKCVLSRPVPPCVHKNVPTVIRCEIPKDLLVDKVVVFE MEKNVEEALQAKANAERKFAERDFVSAKNYALRAQMLCPQLDGISQMVATFGVHSAAEIK VNGELDFYTILGMDPSANRAKLKKQYKRMAVLLHPDKNKNVGADGAFKFISEAWTVLSDR AKRSAYDQRRNLFTLHTSGVGNYANYSNTPASHGRLDTFWTVCTSCQVQYEYHRKYVNKR LSCKNCRGVFIAVETGLAPVNGSYAFSPWPYVPENGYKSHGCGVTYVPTSPAYSANSRVT GHHSKHGSEHASNLSFQWSSFPGTSAGVVDPNGSSTGFSFIQQTNSKASGKKANGKQELT KTVADGSVRSDQLPRRPGRPPKKRKIDLESTNGYGNGDVASNAAAEVIMADGNGSESLKR NAKLPTPEVPIRRWPTAPAFDPRPLLIDKARTDIRKKLEEIRLDAVESEKKRKAHAQFGE SSERPKREGLGLTAHQSDMRKTGSMSLTVPDSDFHDFDKDRSEDCFMPKQIWALYDEEDG MPRLYCLIRQVISVQPFKVHISYLSSKTDSEFGIVNWLDSGFTKSCGKFRAFNSEVIEQV NIFSHLLGGEKAGRGGCVQIYPKRGDIWAIYRNWSPDWNRKTPDEVRHQYEMVEVLGDYS EDFGVCIAPLVKLDGFKTIYRRNTNQDAIRKIPRREMLRFSHQVPSCLLKRETMNLPEGC WELDPAATPDDLLQGVHDVQEERPIQTKRSSGVDLDEMSQAETRILAEQDLRQREYSAVP DMFDEATPGLEIQENSNEHQTLFRPSTELPQSARQAHSFEEPSKMHNHSATTPGEHPRAV MNE*

Transcript Sequence

Transcript ID	Solyc05g040050.2.1
Transcript Infomation	DnaJ domain-containing protein (AHRD V3.3 *** A0A103YK36_CYNCS)
Sequence	ATGAGTGTTCCATTTCTATTAGCTCTTTCTATATCATCTAGGCGAGCAAATTCTTTATTA CACCTTCGTAAATGTGTTCTTAGTCGTCCCGTTCCCCCTTGCGTGCATAAGAATGTTCCA ACTGTAATTCGCTGTGAGATTCCTAAAGATTTGTTGGTGGATAAAGTTGTGGTTTTTGAG ATGGAGAAAAATGTAGAGGAAGCACTACAAGCTAAAGCAAATGCCGAAAGGAAATTTGCG GAGAGAGATTTTGTGAGTGCAAAAAATTATGCTTTAAGAGCTCAGATGCTGTGTCCTCAG TTGGATGGCATATCACAAATGGTAGCGACATTTGGTGTTCACAGTGCTGCAGAGATAAAG GTTAATGGAGAACTTGATTTCTACACGATACTGGGTATGGATCCATCTGCAAACAGGGCT AAGCTGAAGAAACAATATAAGAGGATGGCTGTGTTACTCCATCCTGATAAGAACAAAAAT GTAGGAGCTGATGGTGCGTTTAAGTTTATTTCTGAAGCATGGACTGTTTTGTCTGATCGT GCTAAAAGAAGTGCTTATGATCAGAGGAGAAATTTATTTACTCTGCATACTTCTGGTGTT GGCAACTATGCTAATTACTCCAACACCCCAGCTTCTCATGGAAGGCTCGATACATTTTGG ACTGTTTGTACCTCTTGTCAGGTTCAATATGAATATCATAGGAAATATGTGAACAAAAGG CTGTCTTGTAAGAACTGTCGTGGGGTTTTCATAGCTGTTGAAACTGGATTGGCCCCTGTA AATGGTTCCTATGCATTTAGCCCTTGGCCTTATGTGCCTGAGAATGGATACAAAAGCCAT GGTTGTGGGGTTACGTATGTTCCAACATCGCCTGCTTATTCTGCAAATAGTAGGGTCACA GGACATCATTCTAAGCATGGTTCGGAGCATGCTTCCAATTTATCCTTTCAGTGGAGCTCC TTCCCTGGAACTTCTGCCGGAGTTGTAGATCCAAATGGTTCATCCACTGGCTTCAGTTTT ATCCAGCAGACAAATTCGAAAGCCTCTGGAAAAAAAGCTAATGGGAAGCAAGAACTAACC AAAACAGTTGCTGATGGGTCTGTGCGTAGTGATCAACTGCCCCGCAGGCCTGGTAGGCCT CCTAAGAAGAGAAAAATTGATTTGGAGAGTACAAATGGTTATGGTAATGGTGATGTGGCT TCAAACGCTGCTGCAGAAGTCATAATGGCAGATGGAAACGGGAGTGAGAGTTTGAAAAGA AATGCTAAGCTTCCTACTCCGGAAGTTCCAATCCGAAGATGGCCTACGGCTCCTGCATTT GATCCAAGACCGTTGTTAATTGACAAGGCAAGAACAGATATCCGCAAGAAACTGGAAGAG ATCAGGTTGGATGCTGTAGAGTCCGAGAAAAAGAGAAAGGCACATGCTCAATTTGGTGAA TCGAGTGAAAGACCTAAAAGAGAAGGTCTTGGTCTTACTGCTCATCAATCGGATATGAGG AAAACTGGGTCCATGAGTTTGACTGTCCCAGACTCTGACTTCCATGATTTTGACAAGGAT AGATCAGAGGATTGCTTCATGCCAAAGCAGATATGGGCTTTATATGATGAGGAAGATGGT ATGCCTCGCTTGTATTGTCTGATCCGCCAAGTTATCTCGGTGCAGCCCTTCAAGGTTCAT ATCAGCTACTTAAGTTCAAAAACAGATAGTGAATTTGGGATAGTCAATTGGTTGGATTCT GGTTTTACCAAGTCATGTGGAAAATTTAGGGCCTTTAACTCTGAAGTTATTGAACAAGTC AACATATTTTCTCACCTTCTAGGTGGGGAGAAGGCTGGAAGAGGAGGGTGTGTTCAGATT TACCCAAAAAGGGGAGACATTTGGGCCATTTATCGAAATTGGTCGCCAGATTGGAACAGG AAAACCCCAGATGAAGTGAGGCACCAGTATGAAATGGTGGAGGTCCTTGGTGATTATTCT GAAGATTTTGGTGTTTGCATTGCTCCTTTGGTCAAATTAGATGGATTCAAGACAATATAC CGACGAAACACGAATCAGGATGCCATTCGGAAGATTCCCAGAAGAGAAATGTTGCGATTT TCACATCAAGTGCCATCTTGTTTACTGAAAAGAGAAACAATGAACTTGCCGGAGGGGTGC TGGGAGCTCGACCCTGCTGCTACTCCAGATGATTTGCTTCAAGGGGTACATGACGTACAG GAGGAAAGACCTATTCAAACTAAAAGGTCTTCAGGAGTTGATCTAGACGAGATGTCTCAG GCTGAAACCAGAATATTGGCTGAACAAGATCTTAGACAACGAGAGTACTCTGCTGTTCCT GATATGTTCGATGAGGCTACACCTGGCTTGGAGATTCAAGAAAACTCGAATGAACATCAA ACTCTGTTCAGACCATCCACCGAGCTTCCTCAATCTGCAAGGCAAGCTCATTCTTTTGAG GAACCCAGCAAAATGCACAATCACAGTGCTACAACACCAGGTGAGCATCCGCGAGCTGTG ATGAATGAATAGGTTAATGAAATAAAAAAGGAAATTTGGTTCCGAGGTCCTTTTTTTTCA TAATCATTCTAACAGTATTGAGATTCAGATTGTATAGAGAATTATACACACAACGAAGGA TGATTCTCAAAATATTAGATAGCTGGCAGGATCCGAAGTGATCTGTAACACTTGTACTCA ATTGTTTCTAAGTTGCTATAGGTTAATGAGCGACTTGTACTGATAACTCTGATTTATATC CTTTACAGAAGTTTTCGGATTCATATCGTTTACACATGTTCTTATGTATTTGCTATCTTC AGAAAT