Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g026560.3.1
CDS Infomation

ARM repeat superfamily protein (AHRD V3.3 *** AT1G23180.1)
Sequence

ATGATAATATCAATTGGGGGAGAGATGTTGCTGAAGCCACCGACTTATTTGGTTAAAGGA
GTGTTACGAACTCCAGTAGGAATTAGTGTGACAGTTAAAAGAAGAAAAGCTTATAATCCC
TCATTCTTTTCAAACTCTACGTTTTTCCATAATCATTTCAACCCCAGGTTGTGTTCCAGT
GATGGCATGGGTGAAGTTTATGTTAACCCTCACCAGGATTTTGATATGATAAATGATGCC
TCATCTAATGTCGCATTGTTTGTTCGGATGCTTGGCTTGGATCACGACCTTCTAGATAGA
GAACAAGCAGTAATTGCTCTTTCGAAATATTCACTTGGTGGAAAGCAGTGTGTTGATACC
ATACTGCAGTTTCGGGGTTCTGTTAATCTCACTGTGAACCTTTTAAGGTCTGAATCTAAT
GCTGCTTGTGAAGCAGCGGCTGGTTTATTAAGGATGATATCCTCAGTGGATATATATAGA
GACCTTGTGGCAGATAGTGGTGCTGTAGAAGAGATATATGCCGTCCTCAGACGTTCTTCC
CTCTCATCAGATGTGATGGAGCAAGGGTTATGTACATTGTGGAATTTATCTGTGGATGAG
AAACACAGAAACAAAATTGCCAACTCTGATTTCCTGCCTTTACTAATAAAGTTCCTCGAG
TATGAAGAAGTGCAAGTGAAGGAGGCAGCTGGAGGGATTCTGGCAAATTTGGCGTTGACT
GCTTCTAATCACAATAATATGATTGAAGCAGGTGTCATTCCAAAACTGGCAATGCTCTTG
AAAAATGAGGCTGAGGGATCTAAGGTCATTAGAAATGAAGCGACAAACGCGTTGCTGGAA
CTTGCGAAAGATGAGTACAGCAAGATTCTTATCATGGAGGAAGGTCTTCTTCTGGTCCCT
TTAGTTGGTGCAGCTTCCTACAAGTCCTTCAAACCACCTCTGTATTCATGGCCTTCTTTT
CCTGATGGCACCAAAATTGAAAAAACCCCAAAACCTTCAAGATTTGGTGCCTCTGAATTA
CTTCTTGGATTAAATATTGAGGATAATAATGTAAACATTGAGGAAGGAAAGAAGAATGCA
ATGATAGGACGCACTCGACAACAATTTCTTGCACGTATCGGGGCAATTGAAACTGAAGAA
GAGAACAAATCCATGGGTGGACTTCCTTCGAATCCAAGGTTTACTCTTTTGCCGTGGATT
GATGGTGTGGCTCGGTTGGTATTAATTCTTGGACTTGAAGATGAGTCAGCTATTGCTAGA
GCTGCTGATGCCATTGCAGATGCTTCTATTAATGAACATATGCGAGTTTCATTTAAAGAA
GCAGGTGCTATAAACTCTCTTGTAAAGCTAATTAACCATCCTAGTGACACTGTTAAATTA
GCTGTTCTTCGGGCTATAAAGAGGCTGTCTATCAGTGATGACGTATGCCAAAGGTTGGAA
GAACAAAATGCTTTGTATTCTTTGGTTGACTTGCTCAGTAACTCAGAGATCTCTAAGAGC
TTGACAAGAATGGTATTGGACATTCTTACTCGGATCCTAGATCCTAGCAAAGAAATGAAA
TCAAAGTTTTATAATGGACCAGTTAATGGGTCAATAAAGGCAAGGAGTGCAGCAAGTAAT
GCCGGGTTGACTGGAAATGAAAATCTGAAAGTTGCATCAACTACCAGTTTGGAAACTGTC
AATGTGGTGGATCTCTTAGATTCAACTGTTTTATCTCGCCTAGTTGATATCATGAGGACA
TCGTCTCCGGATTTGCAGAGGAAAGCTGCTTCTATCCTTGAGTTCGCTTCAGTTATTGAG
CCGTGCATGGAAAAGATCCTGTCCATTGACCTAGAAACTGGTCTAGATGCTGTTCTCCAG
CAGAAAACTTTAAATGATACAGAATCTGAAATAGATATGCAGAACCCGGAACTATATGCC
CTTGAGGTAGAAGACGCAGGTTATGCAATATCTGCAGCATCTCGATTACTTGCAAGACTG
CTGGACTTTGAGCAATTCTGTCATATAGTAAATGCATCTCATTTCACAAAATTACTGCGG
AAGGTTCTGAAATCTGACATCCCTCTATACCACAAAGACTGGGTTGCTGCCTGCCTTGTA
AAGCTGAGCTATCTCTCTGGTCCAAATTTTGACTATAATAATCCAATCAACTTAGAAGTA
ACTCTTTACGAGACAATCCCAAGGCTGATAGAACAGATGAAGACCTCATATTCACGGGAA
GTAGAAGAGGCTTCTGTTGTAGAACTGAACAGAATAACCTCTGAAGAGGTGGTGAATTCC
ACAAGAGCCGTGGCTGCAGGGGGAGGGATATTTCCGTTGGTGAAGGTGCTTGAAAATGGG
AGCGAGCGAGCTGTTGAAGCAGCTCTAGCAATACTATATAATTTGAGTATGGAGAGTGAG
AATCATGCTGCAATTATAGCTGCAGGAGCTGTGCCAATTTTGAGAAGACTTGTATTAGCT
CAAGGGTCACATTGGATGCGAGCTCTGAGATTGCTTAGGACATTACCTACATAA

Peptide Sequence

PEP ID

Solyc05g026560.3.1
PEP Infomation

ARM repeat superfamily protein (AHRD V3.3 *** AT1G23180.1)
Sequence

MIISIGGEMLLKPPTYLVKGVLRTPVGISVTVKRRKAYNPSFFSNSTFFHNHFNPRLCSS
DGMGEVYVNPHQDFDMINDASSNVALFVRMLGLDHDLLDREQAVIALSKYSLGGKQCVDT
ILQFRGSVNLTVNLLRSESNAACEAAAGLLRMISSVDIYRDLVADSGAVEEIYAVLRRSS
LSSDVMEQGLCTLWNLSVDEKHRNKIANSDFLPLLIKFLEYEEVQVKEAAGGILANLALT
ASNHNNMIEAGVIPKLAMLLKNEAEGSKVIRNEATNALLELAKDEYSKILIMEEGLLLVP
LVGAASYKSFKPPLYSWPSFPDGTKIEKTPKPSRFGASELLLGLNIEDNNVNIEEGKKNA
MIGRTRQQFLARIGAIETEEENKSMGGLPSNPRFTLLPWIDGVARLVLILGLEDESAIAR
AADAIADASINEHMRVSFKEAGAINSLVKLINHPSDTVKLAVLRAIKRLSISDDVCQRLE
EQNALYSLVDLLSNSEISKSLTRMVLDILTRILDPSKEMKSKFYNGPVNGSIKARSAASN
AGLTGNENLKVASTTSLETVNVVDLLDSTVLSRLVDIMRTSSPDLQRKAASILEFASVIE
PCMEKILSIDLETGLDAVLQQKTLNDTESEIDMQNPELYALEVEDAGYAISAASRLLARL
LDFEQFCHIVNASHFTKLLRKVLKSDIPLYHKDWVAACLVKLSYLSGPNFDYNNPINLEV
TLYETIPRLIEQMKTSYSREVEEASVVELNRITSEEVVNSTRAVAAGGGIFPLVKVLENG
SERAVEAALAILYNLSMESENHAAIIAAGAVPILRRLVLAQGSHWMRALRLLRTLPT*

Transcript Sequence

Transcript ID

Solyc05g026560.3.1
Transcript Infomation

ARM repeat superfamily protein (AHRD V3.3 *** AT1G23180.1)
Sequence

TCTCTCTCTATATATATATATTTGGTCTATTTAGGTTTAGCCCTTTAAAGAGTTCCGAAA
TATGGTGTACATTCCATTATCAGTTGCGAGTTGAACATGATAATATCAATTGGGGGAGAG
ATGTTGCTGAAGCCACCGACTTATTTGGTTAAAGGAGTGTTACGAACTCCAGTAGGAATT
AGTGTGACAGTTAAAAGAAGAAAAGCTTATAATCCCTCATTCTTTTCAAACTCTACGTTT
TTCCATAATCATTTCAACCCCAGGTTGTGTTCCAGTGATGGCATGGGTGAAGTTTATGTT
AACCCTCACCAGGATTTTGATATGATAAATGATGCCTCATCTAATGTCGCATTGTTTGTT
CGGATGCTTGGCTTGGATCACGACCTTCTAGATAGAGAACAAGCAGTAATTGCTCTTTCG
AAATATTCACTTGGTGGAAAGCAGTGTGTTGATACCATACTGCAGTTTCGGGGTTCTGTT
AATCTCACTGTGAACCTTTTAAGGTCTGAATCTAATGCTGCTTGTGAAGCAGCGGCTGGT
TTATTAAGGATGATATCCTCAGTGGATATATATAGAGACCTTGTGGCAGATAGTGGTGCT
GTAGAAGAGATATATGCCGTCCTCAGACGTTCTTCCCTCTCATCAGATGTGATGGAGCAA
GGGTTATGTACATTGTGGAATTTATCTGTGGATGAGAAACACAGAAACAAAATTGCCAAC
TCTGATTTCCTGCCTTTACTAATAAAGTTCCTCGAGTATGAAGAAGTGCAAGTGAAGGAG
GCAGCTGGAGGGATTCTGGCAAATTTGGCGTTGACTGCTTCTAATCACAATAATATGATT
GAAGCAGGTGTCATTCCAAAACTGGCAATGCTCTTGAAAAATGAGGCTGAGGGATCTAAG
GTCATTAGAAATGAAGCGACAAACGCGTTGCTGGAACTTGCGAAAGATGAGTACAGCAAG
ATTCTTATCATGGAGGAAGGTCTTCTTCTGGTCCCTTTAGTTGGTGCAGCTTCCTACAAG
TCCTTCAAACCACCTCTGTATTCATGGCCTTCTTTTCCTGATGGCACCAAAATTGAAAAA
ACCCCAAAACCTTCAAGATTTGGTGCCTCTGAATTACTTCTTGGATTAAATATTGAGGAT
AATAATGTAAACATTGAGGAAGGAAAGAAGAATGCAATGATAGGACGCACTCGACAACAA
TTTCTTGCACGTATCGGGGCAATTGAAACTGAAGAAGAGAACAAATCCATGGGTGGACTT
CCTTCGAATCCAAGGTTTACTCTTTTGCCGTGGATTGATGGTGTGGCTCGGTTGGTATTA
ATTCTTGGACTTGAAGATGAGTCAGCTATTGCTAGAGCTGCTGATGCCATTGCAGATGCT
TCTATTAATGAACATATGCGAGTTTCATTTAAAGAAGCAGGTGCTATAAACTCTCTTGTA
AAGCTAATTAACCATCCTAGTGACACTGTTAAATTAGCTGTTCTTCGGGCTATAAAGAGG
CTGTCTATCAGTGATGACGTATGCCAAAGGTTGGAAGAACAAAATGCTTTGTATTCTTTG
GTTGACTTGCTCAGTAACTCAGAGATCTCTAAGAGCTTGACAAGAATGGTATTGGACATT
CTTACTCGGATCCTAGATCCTAGCAAAGAAATGAAATCAAAGTTTTATAATGGACCAGTT
AATGGGTCAATAAAGGCAAGGAGTGCAGCAAGTAATGCCGGGTTGACTGGAAATGAAAAT
CTGAAAGTTGCATCAACTACCAGTTTGGAAACTGTCAATGTGGTGGATCTCTTAGATTCA
ACTGTTTTATCTCGCCTAGTTGATATCATGAGGACATCGTCTCCGGATTTGCAGAGGAAA
GCTGCTTCTATCCTTGAGTTCGCTTCAGTTATTGAGCCGTGCATGGAAAAGATCCTGTCC
ATTGACCTAGAAACTGGTCTAGATGCTGTTCTCCAGCAGAAAACTTTAAATGATACAGAA
TCTGAAATAGATATGCAGAACCCGGAACTATATGCCCTTGAGGTAGAAGACGCAGGTTAT
GCAATATCTGCAGCATCTCGATTACTTGCAAGACTGCTGGACTTTGAGCAATTCTGTCAT
ATAGTAAATGCATCTCATTTCACAAAATTACTGCGGAAGGTTCTGAAATCTGACATCCCT
CTATACCACAAAGACTGGGTTGCTGCCTGCCTTGTAAAGCTGAGCTATCTCTCTGGTCCA
AATTTTGACTATAATAATCCAATCAACTTAGAAGTAACTCTTTACGAGACAATCCCAAGG
CTGATAGAACAGATGAAGACCTCATATTCACGGGAAGTAGAAGAGGCTTCTGTTGTAGAA
CTGAACAGAATAACCTCTGAAGAGGTGGTGAATTCCACAAGAGCCGTGGCTGCAGGGGGA
GGGATATTTCCGTTGGTGAAGGTGCTTGAAAATGGGAGCGAGCGAGCTGTTGAAGCAGCT
CTAGCAATACTATATAATTTGAGTATGGAGAGTGAGAATCATGCTGCAATTATAGCTGCA
GGAGCTGTGCCAATTTTGAGAAGACTTGTATTAGCTCAAGGGTCACATTGGATGCGAGCT
CTGAGATTGCTTAGGACATTACCTACATAACCAACTGAGCTATATTATGCTTTTACCAGT
TGTAAAATAAAACGATATATGAAATCCCGTATTGTTAGTCTTCAACCTACTTTTTCTTTT
AAGCCAAAAACAAGTATAATTAATATACAGAGATAAATGTACATTGGTCCTGGGGACTTT
ATAATTTCGTTCCAACTGCACAACTAGTTTTGACATTGAATGAATTGCTGTTGTTGATTA
TATTATAAAAGAAGGTAGTAAGGATTAAGTTAATTATATCTCAATTTCATCTTTGAACAA
TTGAAGAAAAAGAAAAAAGAG