Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g026540.3.1
CDS Infomation

Transmembrane protein (AHRD V3.3 *** A0A0B0N2J4_GOSAR)
Sequence

ATGGAAGATAAATCCATTCCATTCGAATCAAGTCACTCCGTATCAAACAATGATAACAAT
CACGGATGGCAAAAGGTGACATATGTGAAGAAGCAGAAAAAAAAGCAGCAAAAAATCTCG
GATTCAGGCAAGGTAATCGCCAATGGATCTGCTATTTCCGGCGCCGATAATGTGTATAAG
TCGCTTGAGAAGCACTCCGATGAACGCCGCAAGAGAATTGCAGCTCAGACGGCTGCGATG
TACGGTGTTGGCGATGCTCCGGTTAGATCGGCGATGAAACACCGGTCGGACGATGAAGAC
GAGGATTACTATGCTGAAGGTGGTGCTGAGAATGGTGCGGTTGGGGAGAAGAAGAAGGAG
AAGGTAAAAAAACCGAAGAAGCCAAAAGTTACTGTGGCTGAAGCTGCTGCGAAGATTGAT
GCAGCTGATCTAGATGCTTTTCTCGCTGATATAACTGTTTCCTATGAATCTCAGCAAGAA
ATACAATTGATGCGTTTTGCTGATTACTTTGGACGGTCATTTGCGGCAGTGGCTGGGTCA
CAATTTCCGTGGTTGAAATTGTTCAGGGAGTCCGCGATCAGTAAAATCGCAGATGTTCCT
GTTTCACATCTTCCTGAACCAGTTTATAAAACATCGGTTGATTGGATCAACCAACGTTCT
TTCGAGGCTCTTGGATCGTTTGTGCTGTGGGGACTAGACAGTATTCTTGTGGACTTAACA
GCCCAATTAGCAGGTTCTAAGGGCTCCAAGAAAGGTGGCCAACAAACATCGTCAAAATCT
CAGGTTGCCATGTTTTTAGTTTTGGCAATGGTACTACGGCGAAAGCCTGATGTTTTAATC
ACCGTACTCCCGACGATTCGGGAAAGTCCAAAGTATCAAGGGCAAGACAAACTTATAGTT
ATTGCATGGATGATAGTCCAGGCCTGTCAGGGCGATCTCTGCGTTGGATTGTACTTGTGG
GCACATCATACCTTGCCTTTAGTTGGAGGAAAATCAGGTTCCAATCCGCAGACAAGGGAC
TTGATTTTGCAGGTGGTAGAAAGGATCCTCTCTGCACCAAAAGCTCGAACAATTTTAGTA
AATGGGGCTGTTAGGAAGGGAGAGCGTCTGATGTCACCTTCATCCCTTGACCTGCTTCTA
CGGGTGACTTTTCCCGCTCCTTCTGTGCGAGTTAAGGCAACTGAAAGGTTTGAGGCAGTA
TATCCCACTCTTAAGGAGGTTGCGCTTGCTGGTTCCCCTGGAAGCAAAGCAATGAAGCAA
GTTTCTCAACAGATACTTCTACTAGCTGTAAAGGCCGTTGGAGGAGGCAATCCAGAACTA
TCTCGAGAGGCAACAAACATATTCAATTGGTGTTTGACCCAGAGCGCTGACTGTTACAAG
CAGTGGGACAAGATTTACCTGGATAACATAGAAGCAAGTGCTGCTGTGTTGAGAAAGCTC
AACGAGGAGTGGAAGGAGTTATCGAGGAGACAGTCCTCTACTGAGGCCTTGAAGGAGACT
CTCAAGAGCTTCAGAGAGAAGAATGAGAAATCATTAACTGGTGGAGCGGATGCTCATCAG
TCACACTTCAGAGATGCAGATAAGTACTGTAAAATGTTGTTAGCAAGGCTGTCTCGTGGA
CATGGATGTGTGAAAGGATTTGTTGTTGTTCTTTTGGCTATGGCGGTGGGAGGTGCTATT
GTGTCACAGAACTTGGAGGATTGGGATTGGAACAAGTTTTTGGCTTTACTTGATATCCCA
CAGACCTCCTAA

Peptide Sequence

PEP ID

Solyc05g026540.3.1
PEP Infomation

Transmembrane protein (AHRD V3.3 *** A0A0B0N2J4_GOSAR)
Sequence

MEDKSIPFESSHSVSNNDNNHGWQKVTYVKKQKKKQQKISDSGKVIANGSAISGADNVYK
SLEKHSDERRKRIAAQTAAMYGVGDAPVRSAMKHRSDDEDEDYYAEGGAENGAVGEKKKE
KVKKPKKPKVTVAEAAAKIDAADLDAFLADITVSYESQQEIQLMRFADYFGRSFAAVAGS
QFPWLKLFRESAISKIADVPVSHLPEPVYKTSVDWINQRSFEALGSFVLWGLDSILVDLT
AQLAGSKGSKKGGQQTSSKSQVAMFLVLAMVLRRKPDVLITVLPTIRESPKYQGQDKLIV
IAWMIVQACQGDLCVGLYLWAHHTLPLVGGKSGSNPQTRDLILQVVERILSAPKARTILV
NGAVRKGERLMSPSSLDLLLRVTFPAPSVRVKATERFEAVYPTLKEVALAGSPGSKAMKQ
VSQQILLLAVKAVGGGNPELSREATNIFNWCLTQSADCYKQWDKIYLDNIEASAAVLRKL
NEEWKELSRRQSSTEALKETLKSFREKNEKSLTGGADAHQSHFRDADKYCKMLLARLSRG
HGCVKGFVVVLLAMAVGGAIVSQNLEDWDWNKFLALLDIPQTS*

Transcript Sequence

Transcript ID

Solyc05g026540.3.1
Transcript Infomation

Transmembrane protein (AHRD V3.3 *** A0A0B0N2J4_GOSAR)
Sequence

TTCACATTTGAAAATGGTATTCCGTAATTTTATGAAACTCGAAACCCTATGTTACTGAGT
CAACTCCTATATATACCTTCGTCTCCGACCAAACTCTTTTTCTTTCTTCCCAAAAATTCC
GATCTATTTCTCTACCTCTCCGGCGAAAAAGGATAATCATGGAAGATAAATCCATTCCAT
TCGAATCAAGTCACTCCGTATCAAACAATGATAACAATCACGGATGGCAAAAGGTGACAT
ATGTGAAGAAGCAGAAAAAAAAGCAGCAAAAAATCTCGGATTCAGGCAAGGTAATCGCCA
ATGGATCTGCTATTTCCGGCGCCGATAATGTGTATAAGTCGCTTGAGAAGCACTCCGATG
AACGCCGCAAGAGAATTGCAGCTCAGACGGCTGCGATGTACGGTGTTGGCGATGCTCCGG
TTAGATCGGCGATGAAACACCGGTCGGACGATGAAGACGAGGATTACTATGCTGAAGGTG
GTGCTGAGAATGGTGCGGTTGGGGAGAAGAAGAAGGAGAAGGTAAAAAAACCGAAGAAGC
CAAAAGTTACTGTGGCTGAAGCTGCTGCGAAGATTGATGCAGCTGATCTAGATGCTTTTC
TCGCTGATATAACTGTTTCCTATGAATCTCAGCAAGAAATACAATTGATGCGTTTTGCTG
ATTACTTTGGACGGTCATTTGCGGCAGTGGCTGGGTCACAATTTCCGTGGTTGAAATTGT
TCAGGGAGTCCGCGATCAGTAAAATCGCAGATGTTCCTGTTTCACATCTTCCTGAACCAG
TTTATAAAACATCGGTTGATTGGATCAACCAACGTTCTTTCGAGGCTCTTGGATCGTTTG
TGCTGTGGGGACTAGACAGTATTCTTGTGGACTTAACAGCCCAATTAGCAGGTTCTAAGG
GCTCCAAGAAAGGTGGCCAACAAACATCGTCAAAATCTCAGGTTGCCATGTTTTTAGTTT
TGGCAATGGTACTACGGCGAAAGCCTGATGTTTTAATCACCGTACTCCCGACGATTCGGG
AAAGTCCAAAGTATCAAGGGCAAGACAAACTTATAGTTATTGCATGGATGATAGTCCAGG
CCTGTCAGGGCGATCTCTGCGTTGGATTGTACTTGTGGGCACATCATACCTTGCCTTTAG
TTGGAGGAAAATCAGGTTCCAATCCGCAGACAAGGGACTTGATTTTGCAGGTGGTAGAAA
GGATCCTCTCTGCACCAAAAGCTCGAACAATTTTAGTAAATGGGGCTGTTAGGAAGGGAG
AGCGTCTGATGTCACCTTCATCCCTTGACCTGCTTCTACGGGTGACTTTTCCCGCTCCTT
CTGTGCGAGTTAAGGCAACTGAAAGGTTTGAGGCAGTATATCCCACTCTTAAGGAGGTTG
CGCTTGCTGGTTCCCCTGGAAGCAAAGCAATGAAGCAAGTTTCTCAACAGATACTTCTAC
TAGCTGTAAAGGCCGTTGGAGGAGGCAATCCAGAACTATCTCGAGAGGCAACAAACATAT
TCAATTGGTGTTTGACCCAGAGCGCTGACTGTTACAAGCAGTGGGACAAGATTTACCTGG
ATAACATAGAAGCAAGTGCTGCTGTGTTGAGAAAGCTCAACGAGGAGTGGAAGGAGTTAT
CGAGGAGACAGTCCTCTACTGAGGCCTTGAAGGAGACTCTCAAGAGCTTCAGAGAGAAGA
ATGAGAAATCATTAACTGGTGGAGCGGATGCTCATCAGTCACACTTCAGAGATGCAGATA
AGTACTGTAAAATGTTGTTAGCAAGGCTGTCTCGTGGACATGGATGTGTGAAAGGATTTG
TTGTTGTTCTTTTGGCTATGGCGGTGGGAGGTGCTATTGTGTCACAGAACTTGGAGGATT
GGGATTGGAACAAGTTTTTGGCTTTACTTGATATCCCACAGACCTCCTAAGTAATCTGGA
CCAGATGAGCAATGTTCTTTTTTAACAGTTGATGGTCTCAGCAGCAGTTGTTTCAGAAAA
CATAAAAATAACTTTTTGGAGAAACAGGTAGCGGAACTTGGAGATATCGGGATGGATGCT
TATATTTTCATGAAAGAATGAGTCATGTTTAATTTATCAGTCTTGTTTTGATCTGTCTGT
TAGTTTAAGTTTAAGTGGTAGTATGCATGTTAGCTGTTACCAAGTTTTCAACATCTTTTT
TCAGTTTAAGTAAATTGATTGTCATTACCAGAATACAGATGTAATTTCAACGGGTAAGAA
AGAATCCAAAAAGGATTTAATAATTGGTAGGTTGAGTATTTCAACTTATTTGCATCTCAA
AGTTTATT