Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g018750.3.1
CDS Infomation	Cell wall protein AWA1 isoform 1 (AHRD V3.3 *** A0A061DLI6_THECC)
Sequence	ATGAGTAGCAACAACAGTGGAGTCGGTGGAGGAGGAGCTAGGGTTTCAATCCCAAGCACT GTGAAGAAAACGATCCACAACATCAAGGAGATCACTGGGAATCACAGTGACGATGAGATA TATGCAATGCTCAAGGAATGTTCGATGGATCCCAATGAGACTGCACAAAAACTTCTTTAT CAGGATACATTCCATGAAGTAAAAAGGAAACACGACAGAAGAAGAGAGAATTTGAACAAG GAGTCTGCTGAGCCAACGTGGAAACCAGCTATGCAGGGGAGGGGGAACAAGGGGAGTCGG GGAAACTTCACTCCTCGCCATGTCTTGCTTGATGTTGGTGGTGGAAGGAACTCTAGACCT GATAAGGAAAATGGAGCCAGTCATGTTTCTGGAAAGAGTGTCAATCCATCTTCCGTGCCT ACTGTTGAGGGGAAGAATACTTCAAGCTCATCAAGTGCCAGAGCCATTCGTCCTGGTGTT GTAGCTTTTGGGAGTAACAATGTTGTACCTAATGCACATGCATCAGCAGGAAGAGGGATT AAGCAATCTGAAGCCACTGCGGGTGCTGGCTCTATTAAGTCGGAGGAACCTCTGCAATCT GCAAGTCATGATGCGAACAGAAGCCCTAGAGTGTCTGTGGGAACCAGGGATATGCTTGGA CAGAAAATGCCAAACTTCAGCAACTCTTCAACATCCTTGTCTTCACCACCTTCGTCAGGA GCTTATTTTTCAGCGTCTGATCCTGTTCTTTTGCCATCTCATGATTCACGACCCCTTGGT GCAGTAGGCACAATCCGAAGAGAAGTCGGTAGCCAGCGTGCTCCATTTGAAAATTTTCCT ACCAACTCTAACGGAAGCAAGACAGCCACTGAGGTTTCTGACTCTAGAAGTTCAACTGTA CAAGCAAACATGTCAAGCAAATTCCAGGGGCTTGTAAAGAATCCGCTTCTAGAGAACCCA CAAAGTGCTTCTTCGGCTCAGGGTGTTTCTTCTCTTAGTAGACCTACACCTAATTACAAT AACCGATCACCACTGGTTGGGCCACAAAAAGCTGGTCCTGGTATGGAATGGAAGCCAAAG CCTACAAACAATAGTATTGCTCAAATTTCTGTTTCATCTGCTGCTGGTTCATCTGATGTT TCTACAGTTTCTACTGAAGTTGATACTCAGCCGCAGCCTCCAGGTGTCGATGTTGAAACA AGGGAAGGGACTTTGGAACTGCAGCAGAAGTTAGAAAAATCACACATTTCAGATATTCAG TATGTTATTATCCCTAACCACCTTCATGTGCCCGAGGTGGAAAAACTTGGTTTCTGTTTT GGAAGTTTTGAAGCTAGCCTGAGTTTACGCATCAGCACAAACAGTGCTGCTGAGAGTGAA AAGACTCTATCACTCTCTGGAACTTCTGAGGATATCGAAGAAACAATAAATGATCAGTTG TCGAGTGATCAAAATCCATCAGCAGCTGCAGAGGGTGCCAATTGTTCTGATCAATCTCCG CCATCAGGTGGGCAGGAGAATTTGTCTGCAAAGACAGAAGATGTCTCATCCTCCATTCCC GAGTACAGTGAATCTAAGCAAGGGACTCTGCAAGGAGGTCATCAGTATTCAGTTGTTCAT ACATCCCCAAACTACAGTTTTGGTTTTGTGCCACCAACATTAGGCAGCCAGCTTGCACCT TTTGAAATCTCTGAATCACAGTCTCGTGATGTTTCTCGTCTTCCAAACTTTGTCGTTCAG CAACCAATTGACCCAACAAGCTACTATGCCCAGTACTATCGCTCCAGTGTCGATGGTGAT GGCCGCATTTCACCTTTTCATTCAGCGGGAGTTTCTACCAAGTACAACGGCAATGTTGCA GTTGTGCCTCCACAAACTTCTCAAGAGGGAGGAAATGCTCCAACATCACTTGCAACTCAA GCTGCTGGCATTATGCAGTGTTCAGCAGCTGTAACTCAACAATCCCTCCCTGTATTTCGA CAAGCTACAGGGATGCATTTGCCTCATTATCCTCCAAATTATATCCCATATGCTCACTAC TTCTCTCCATATTATGTTCCTCCAACAGCCATCCATCAATTCTTAAGCAATGGTGCATTT CCCCAGCAACCTCAGGCTGGTAGTGTGTATCCACCTCCTCCAGCCGCTGCTCCCAGATAC TCACCTTCACAATATAGATCAGGAGCTAATGTAGGAAATTCAACTCACAATGGAGTGCCT GGGACGTATGGGCCATATGGATCCTCTACATCCAACTATACCCCTGTTTCGACTACAGGA GGTGGAAACCCTGCTTCTAATGAGGATCCTTCTGCTTCTTCCTTCAAGGATAGCCAACAA CAGAGTGAGGGCTCAGGTGTGTGGATTACTCCAGGTCGAGATTTATCCAGCTTGCAAGCA AGTTCTTTTTTCAACCTACCCCAGGGTCAAGTGGCTTTTACTCCCACACAACCTGGCCAT GGAATCATTGCTGGTCTTTATCATCCAGCACAACCAGTGACAGCACAGACTGTTCACCCA CTTATGCAACAGTCACAGACCATGTCTGGTCCAATTGATATGGTTGGACCCACAGCCACT GTGTATCAGCAGCCTCATCATTCACAAATTAACTGGCCAAGCAGCTACTAA

Peptide Sequence

PEP ID	Solyc05g018750.3.1
PEP Infomation	Cell wall protein AWA1 isoform 1 (AHRD V3.3 *** A0A061DLI6_THECC)
Sequence	MSSNNSGVGGGGARVSIPSTVKKTIHNIKEITGNHSDDEIYAMLKECSMDPNETAQKLLY QDTFHEVKRKHDRRRENLNKESAEPTWKPAMQGRGNKGSRGNFTPRHVLLDVGGGRNSRP DKENGASHVSGKSVNPSSVPTVEGKNTSSSSSARAIRPGVVAFGSNNVVPNAHASAGRGI KQSEATAGAGSIKSEEPLQSASHDANRSPRVSVGTRDMLGQKMPNFSNSSTSLSSPPSSG AYFSASDPVLLPSHDSRPLGAVGTIRREVGSQRAPFENFPTNSNGSKTATEVSDSRSSTV QANMSSKFQGLVKNPLLENPQSASSAQGVSSLSRPTPNYNNRSPLVGPQKAGPGMEWKPK PTNNSIAQISVSSAAGSSDVSTVSTEVDTQPQPPGVDVETREGTLELQQKLEKSHISDIQ YVIIPNHLHVPEVEKLGFCFGSFEASLSLRISTNSAAESEKTLSLSGTSEDIEETINDQL SSDQNPSAAAEGANCSDQSPPSGGQENLSAKTEDVSSSIPEYSESKQGTLQGGHQYSVVH TSPNYSFGFVPPTLGSQLAPFEISESQSRDVSRLPNFVVQQPIDPTSYYAQYYRSSVDGD GRISPFHSAGVSTKYNGNVAVVPPQTSQEGGNAPTSLATQAAGIMQCSAAVTQQSLPVFR QATGMHLPHYPPNYIPYAHYFSPYYVPPTAIHQFLSNGAFPQQPQAGSVYPPPPAAAPRY SPSQYRSGANVGNSTHNGVPGTYGPYGSSTSNYTPVSTTGGGNPASNEDPSASSFKDSQQ QSEGSGVWITPGRDLSSLQASSFFNLPQGQVAFTPTQPGHGIIAGLYHPAQPVTAQTVHP LMQQSQTMSGPIDMVGPTATVYQQPHHSQINWPSSY*

Transcript Sequence

Transcript ID	Solyc05g018750.3.1
Transcript Infomation	Cell wall protein AWA1 isoform 1 (AHRD V3.3 *** A0A061DLI6_THECC)
Sequence	GAGGTAGGAATTTGTGGGTTGGTGGGGGTGGTGAAGAAGAAGATGAGTAGCAACAACAGT GGAGTCGGTGGAGGAGGAGCTAGGGTTTCAATCCCAAGCACTGTGAAGAAAACGATCCAC AACATCAAGGAGATCACTGGGAATCACAGTGACGATGAGATATATGCAATGCTCAAGGAA TGTTCGATGGATCCCAATGAGACTGCACAAAAACTTCTTTATCAGGATACATTCCATGAA GTAAAAAGGAAACACGACAGAAGAAGAGAGAATTTGAACAAGGAGTCTGCTGAGCCAACG TGGAAACCAGCTATGCAGGGGAGGGGGAACAAGGGGAGTCGGGGAAACTTCACTCCTCGC CATGTCTTGCTTGATGTTGGTGGTGGAAGGAACTCTAGACCTGATAAGGAAAATGGAGCC AGTCATGTTTCTGGAAAGAGTGTCAATCCATCTTCCGTGCCTACTGTTGAGGGGAAGAAT ACTTCAAGCTCATCAAGTGCCAGAGCCATTCGTCCTGGTGTTGTAGCTTTTGGGAGTAAC AATGTTGTACCTAATGCACATGCATCAGCAGGAAGAGGGATTAAGCAATCTGAAGCCACT GCGGGTGCTGGCTCTATTAAGTCGGAGGAACCTCTGCAATCTGCAAGTCATGATGCGAAC AGAAGCCCTAGAGTGTCTGTGGGAACCAGGGATATGCTTGGACAGAAAATGCCAAACTTC AGCAACTCTTCAACATCCTTGTCTTCACCACCTTCGTCAGGAGCTTATTTTTCAGCGTCT GATCCTGTTCTTTTGCCATCTCATGATTCACGACCCCTTGGTGCAGTAGGCACAATCCGA AGAGAAGTCGGTAGCCAGCGTGCTCCATTTGAAAATTTTCCTACCAACTCTAACGGAAGC AAGACAGCCACTGAGGTTTCTGACTCTAGAAGTTCAACTGTACAAGCAAACATGTCAAGC AAATTCCAGGGGCTTGTAAAGAATCCGCTTCTAGAGAACCCACAAAGTGCTTCTTCGGCT CAGGGTGTTTCTTCTCTTAGTAGACCTACACCTAATTACAATAACCGATCACCACTGGTT GGGCCACAAAAAGCTGGTCCTGGTATGGAATGGAAGCCAAAGCCTACAAACAATAGTATT GCTCAAATTTCTGTTTCATCTGCTGCTGGTTCATCTGATGTTTCTACAGTTTCTACTGAA GTTGATACTCAGCCGCAGCCTCCAGGTGTCGATGTTGAAACAAGGGAAGGGACTTTGGAA CTGCAGCAGAAGTTAGAAAAATCACACATTTCAGATATTCAGTATGTTATTATCCCTAAC CACCTTCATGTGCCCGAGGTGGAAAAACTTGGTTTCTGTTTTGGAAGTTTTGAAGCTAGC CTGAGTTTACGCATCAGCACAAACAGTGCTGCTGAGAGTGAAAAGACTCTATCACTCTCT GGAACTTCTGAGGATATCGAAGAAACAATAAATGATCAGTTGTCGAGTGATCAAAATCCA TCAGCAGCTGCAGAGGGTGCCAATTGTTCTGATCAATCTCCGCCATCAGGTGGGCAGGAG AATTTGTCTGCAAAGACAGAAGATGTCTCATCCTCCATTCCCGAGTACAGTGAATCTAAG CAAGGGACTCTGCAAGGAGGTCATCAGTATTCAGTTGTTCATACATCCCCAAACTACAGT TTTGGTTTTGTGCCACCAACATTAGGCAGCCAGCTTGCACCTTTTGAAATCTCTGAATCA CAGTCTCGTGATGTTTCTCGTCTTCCAAACTTTGTCGTTCAGCAACCAATTGACCCAACA AGCTACTATGCCCAGTACTATCGCTCCAGTGTCGATGGTGATGGCCGCATTTCACCTTTT CATTCAGCGGGAGTTTCTACCAAGTACAACGGCAATGTTGCAGTTGTGCCTCCACAAACT TCTCAAGAGGGAGGAAATGCTCCAACATCACTTGCAACTCAAGCTGCTGGCATTATGCAG TGTTCAGCAGCTGTAACTCAACAATCCCTCCCTGTATTTCGACAAGCTACAGGGATGCAT TTGCCTCATTATCCTCCAAATTATATCCCATATGCTCACTACTTCTCTCCATATTATGTT CCTCCAACAGCCATCCATCAATTCTTAAGCAATGGTGCATTTCCCCAGCAACCTCAGGCT GGTAGTGTGTATCCACCTCCTCCAGCCGCTGCTCCCAGATACTCACCTTCACAATATAGA TCAGGAGCTAATGTAGGAAATTCAACTCACAATGGAGTGCCTGGGACGTATGGGCCATAT GGATCCTCTACATCCAACTATACCCCTGTTTCGACTACAGGAGGTGGAAACCCTGCTTCT AATGAGGATCCTTCTGCTTCTTCCTTCAAGGATAGCCAACAACAGAGTGAGGGCTCAGGT GTGTGGATTACTCCAGGTCGAGATTTATCCAGCTTGCAAGCAAGTTCTTTTTTCAACCTA CCCCAGGGTCAAGTGGCTTTTACTCCCACACAACCTGGCCATGGAATCATTGCTGGTCTT TATCATCCAGCACAACCAGTGACAGCACAGACTGTTCACCCACTTATGCAACAGTCACAG ACCATGTCTGGTCCAATTGATATGGTTGGACCCACAGCCACTGTGTATCAGCAGCCTCAT CATTCACAAATTAACTGGCCAAGCAGCTACTAAGGAGCTGGTCCTGCCATTTGTAAACCG GAAAGAAAATGAAATTCTTAAATACAATTTTGGGGGTTACAATTAGTTTGGAGACGGAGG AAGTATCTAGCACGTGCCTAAAAGACAAGCACTGTGCAGGTTGACTGTAAATCTATTAGA CCCCTCCCTGGAAAAAAGGAAAAAAGACGAGGTATCTCTTTTCTTGCTTGGGATTGAGGA TTCAAAGGGTAAAGTCCTCCTGTAACGAATAGTGACATTCTTTAGTTTGTAGCAGGTATA AGCATATCAGTTTTCGTTTACATTTTGTTAGCCCTTCAATAGTTTTCAGCATTAACTCTT TTTCTTTTTGGTATTTTTTTTCACATTTCTTTCGTATGTATCCTTCTATTGGTAGGTTAG GACTGTTAAAAGCAATGAGGGGTTTAGGGGATTTTCATAATTTCTCTCTTTTTGCTTCCA ATCATCTTCATCTGTAAAGTTAGTTTTGACATTTAAAAAGGGATGTACTTGGGACTCTTG TTATTGGTGCTTCCAGATGCTGATTCAGTTTTGCATGTGGGGGTAAATTGATTGATATAA TGCAGCTTTTAAAGAGCTTGTTGAAAAATTATGGAATCTTGCTTGTGCCCAAGATTTTCT GTGATGTATATCTTTTCTTTATTTGTCTTATTTTTGTCTTTTTCCAGTACTCAATGCAGA TGTTCATTGCCATGAAGTAAATGTGGGGAGGGGTCCTGAAACATGTTTCTGATAAAAGAT CTGCTGTATTTTAGTTAAGATACTGTACATCTAAACAGCACATAAACAAGCTTGGCATTG AATGCTCTGTTGGATCTCTAGGATTCATATTGAAAATATGACTTTAACATTATTGATCTT ATTGCTATTTGGTGGGAAATATCAATATGAAGATACATGGATCCTAGCCCCTTATATCTT CATTGCTGGCTAATCTGTCACTGTCCTTAAGTACGTCTTTACTAAGACGATGGTTTCTCA ATGGATGACAACTCTTCTTCTTAGTCCTTGGCCAGTCTCTGATAGAGGACGAAGCTTGAA CCCATAGGGTCTCTCTTGAAGAACTAACCCTAATACTCACTTGGATTAAAATGG