Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g018233.1.1
CDS Infomation	CRS2-associated factor 1, chloroplastic (AHRD V3.3 *** A0A0K9PK33_ZOSMR)
Sequence	ATGGGTTCAACAACCCTAATCCAATTCCCAATTTTCTCACCACCAGCTCCACCACACAGC CACCGTCCGGCGACTGAAATCCGCTTCTCACGGTGGAACAATGCCAACGCCGAAAAATTC ATTCGCCATGAACGAACTCAGAAGGAAATTGAAGATGAAATCCGCTTCCATAAGCGCTTC GATTCTGTCCTTAGCATTGCCAATAATTACAACCCTGCCCCTCCATCACCAGTCGCTGAA AAAACCTTCAAATCCACTGGCACTCCTTCAACTCCTTCTTCACCTTCCATCCCTGGGAAA AAGTCCAAGTATTCCAGAAATTTCCACAACAACCCTCGTCAAATACACCCCGCATTTAAA CCTTTAGTTAGAACCCGCAAGATTCCAGTTGAAACCCCTGATGAAACAGCAGGAAAATCA GATATTGATATCAAAGTTGATGAAAATGGGGTTTGTTATGAATTTCCAGAAGCCCCTTTT GTATATCAATATAGCTATACTGAAACACCAAAGGTGAAGCCTAGAAAGTTGCGTGAACCG TTAGTTTCACCATTTGGACCGGAGTCAATGCAGAGGCCATGGACAGGTCGGAAGCCGTTG CCACCGAGCAAGAAGAAGCTTCCAGAATTTGATTCATTTCAGCTGCCTCCTCCCCATAAG AAAGGGGTCAAGCCGGTTCAGGCTCCTGGACCATTCTTGGCAGGTTCTGGGCCGAAGTAC GTTAAGTCCAGAGAGGAGGTATTGGGAGAGCCATTGACAAAGGAGGAGATGATGGAGCTT ATAAATAGTTGTAAGAAAACAACACGGCAAATGAATATAGGACGAGACGGCTTAACACAT AACATGTTAGAGAACATCCATGCTCATTGGAAGCGAAAAAGGGTGTGCAAGATAAAATGC AAGGGTGTGTGTACTGTGGACATGGACAATGTCTGTGAAAAGTTAGAGGAGAAGACAGGT GGAAAAATTATCTACCATAAAGGTGGTGTGATATACCTTTTCCGTGGTCGAAACTACAAC TACATGACTCGGCCACGCTTTCCTCTCATGTTATGGCGGCCTGTAACTCCTGTCTACCCA AGGTTGGTTCGACGAGTTCCAGAGGGTCTGACTTTAGAGGAAGCAACTGAAATGCGCAAA AAAGGACGCAATCTGATACCTATCTGCAAGCTTGCAAAAAATGGGGTGTATTGTGACCTT GTAAAGAATGTCAGAGAAGCATTTGAAGCTTGTGAATTGGTCTGTATAAATTGTCAAGGA TTGAACCCAAGCGACTATAGGAAGATAGGTGCCAAGCTTAAGGATCTTGTCCCATGTGTG TTAATCTCTTTTGAGCAAGAGCACATACTCATATGGAGAGGACGGGATTGGGTATCCTCT CTACCTGAAGACGGAGACAATCCAGAGATAAGGGAGGGCTCGGAATCTGTTAATGCTGCT AACACTAACCGATCCTTTGAAGTTCAAGTGGTTGCATCTACTGCGGGAAGTTCAAGTTTA CCAGTTACAGAAGTGAATACTTACAATCTCAGTGCTAACACTTTTCCTCTGGGTGATGAA GATGCAGAGTATGTTAGAAAGGATGGAACGAAGGAAGATAGATCGGAGGATCACTATCCG GAATCTTCCAATAAGGTTTCTGTTACAACGACTGGGATAAGTAAAAGCGAAATCCCTCTG GTGTATGCAGGAGATACAGGTGACAATTCTAGAATTCTGAGTGACTGCCGTGAATGCAAA ACAAGGTCGGATGATTCAGTGGTGGATAAAGAAAGTGAGTTTGAGAGCGCTTCAGATGAT GTAGAAAACAAGTTTGATTCCTCATCTTTGGTTCCCTTGACTGGTTACAAGGTGCATTCT CTAACGGTAGATACGAACCAAAACTGTCAGCTGGTAAGCTCTATCACGCCGTGTACGGAA GGAATTTTACTACTTTGGAAGCAGGCTATTGAAAGTGGGAGTGCAGTTGTATTAAATGAT TCTAGTATCGATGCTGACATTGTCTATCAAAGGGCTGTTGCTCTCTCTACATCTGTCCCA CCTGGACCAGTTTTTCAGCATCAACCTAAGAAAGTATCAGTTCAAAGACGCGGGGAAGAG GAAATTGGTGATTTGGAGGTAGGATGCACCAAATTAGATACTCCAGCTTCTTCGAGAAAA GAAACTGTTGTTTCGAGTAGAAAGGTCAATTCAACAACGAGTACGAGAAAGGAGAAGAAG AAGGGTATTCGAAAAGATTATCTGAATGTAGTACCAAAAGGAAGCTTAGGAGTAGACGAG CTTGCCAAATTGCTAGCATAG

Peptide Sequence

PEP ID	Solyc05g018233.1.1
PEP Infomation	CRS2-associated factor 1, chloroplastic (AHRD V3.3 *** A0A0K9PK33_ZOSMR)
Sequence	MGSTTLIQFPIFSPPAPPHSHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRF DSVLSIANNYNPAPPSPVAEKTFKSTGTPSTPSSPSIPGKKSKYSRNFHNNPRQIHPAFK PLVRTRKIPVETPDETAGKSDIDIKVDENGVCYEFPEAPFVYQYSYTETPKVKPRKLREP LVSPFGPESMQRPWTGRKPLPPSKKKLPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKY VKSREEVLGEPLTKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKC KGVCTVDMDNVCEKLEEKTGGKIIYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYP RLVRRVPEGLTLEEATEMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQG LNPSDYRKIGAKLKDLVPCVLISFEQEHILIWRGRDWVSSLPEDGDNPEIREGSESVNAA NTNRSFEVQVVASTAGSSSLPVTEVNTYNLSANTFPLGDEDAEYVRKDGTKEDRSEDHYP ESSNKVSVTTTGISKSEIPLVYAGDTGDNSRILSDCRECKTRSDDSVVDKESEFESASDD VENKFDSSSLVPLTGYKVHSLTVDTNQNCQLVSSITPCTEGILLLWKQAIESGSAVVLND SSIDADIVYQRAVALSTSVPPGPVFQHQPKKVSVQRRGEEEIGDLEVGCTKLDTPASSRK ETVVSSRKVNSTTSTRKEKKKGIRKDYLNVVPKGSLGVDELAKLLA*

Transcript Sequence

Transcript ID	Solyc05g018233.1.1
Transcript Infomation	CRS2-associated factor 1, chloroplastic (AHRD V3.3 *** A0A0K9PK33_ZOSMR)
Sequence	ATCCAAATAATTTTTCATAAATAAATATATATTTTAATGTATTCAAATAGTCCAATAATA TTTTCACCCTTATTGTTAAAAGTAAAAATTTTCAATAAAATTATCATATTATATTATATG TATGATCATCAAATAAAATCAATAATAGTTTTGGTCCCTCTCTAATCAATAAAATAGATT TTATTTTTCATTCCTCATTCAGAAATATCGAGAAAAATAGTAATCCTAAATTCTCGTTCG CATTTTTGAATGCCTTTCATCTTTTTGTAGCAAAAACGTAGTGAAATAATGGGTTCAACA ACCCTAATCCAATTCCCAATTTTCTCACCACCAGCTCCACCACACAGCCACCGTCCGGCG ACTGAAATCCGCTTCTCACGGTGGAACAATGCCAACGCCGAAAAATTCATTCGCCATGAA CGAACTCAGAAGGAAATTGAAGATGAAATCCGCTTCCATAAGCGCTTCGATTCTGTCCTT AGCATTGCCAATAATTACAACCCTGCCCCTCCATCACCAGTCGCTGAAAAAACCTTCAAA TCCACTGGCACTCCTTCAACTCCTTCTTCACCTTCCATCCCTGGGAAAAAGTCCAAGTAT TCCAGAAATTTCCACAACAACCCTCGTCAAATACACCCCGCATTTAAACCTTTAGTTAGA ACCCGCAAGATTCCAGTTGAAACCCCTGATGAAACAGCAGGAAAATCAGATATTGATATC AAAGTTGATGAAAATGGGGTTTGTTATGAATTTCCAGAAGCCCCTTTTGTATATCAATAT AGCTATACTGAAACACCAAAGGTGAAGCCTAGAAAGTTGCGTGAACCGTTAGTTTCACCA TTTGGACCGGAGTCAATGCAGAGGCCATGGACAGGTCGGAAGCCGTTGCCACCGAGCAAG AAGAAGCTTCCAGAATTTGATTCATTTCAGCTGCCTCCTCCCCATAAGAAAGGGGTCAAG CCGGTTCAGGCTCCTGGACCATTCTTGGCAGGTTCTGGGCCGAAGTACGTTAAGTCCAGA GAGGAGGTATTGGGAGAGCCATTGACAAAGGAGGAGATGATGGAGCTTATAAATAGTTGT AAGAAAACAACACGGCAAATGAATATAGGACGAGACGGCTTAACACATAACATGTTAGAG AACATCCATGCTCATTGGAAGCGAAAAAGGGTGTGCAAGATAAAATGCAAGGGTGTGTGT ACTGTGGACATGGACAATGTCTGTGAAAAGTTAGAGGAGAAGACAGGTGGAAAAATTATC TACCATAAAGGTGGTGTGATATACCTTTTCCGTGGTCGAAACTACAACTACATGACTCGG CCACGCTTTCCTCTCATGTTATGGCGGCCTGTAACTCCTGTCTACCCAAGGTTGGTTCGA CGAGTTCCAGAGGGTCTGACTTTAGAGGAAGCAACTGAAATGCGCAAAAAAGGACGCAAT CTGATACCTATCTGCAAGCTTGCAAAAAATGGGGTGTATTGTGACCTTGTAAAGAATGTC AGAGAAGCATTTGAAGCTTGTGAATTGGTCTGTATAAATTGTCAAGGATTGAACCCAAGC GACTATAGGAAGATAGGTGCCAAGCTTAAGGATCTTGTCCCATGTGTGTTAATCTCTTTT GAGCAAGAGCACATACTCATATGGAGAGGACGGGATTGGGTATCCTCTCTACCTGAAGAC GGAGACAATCCAGAGATAAGGGAGGGCTCGGAATCTGTTAATGCTGCTAACACTAACCGA TCCTTTGAAGTTCAAGTGGTTGCATCTACTGCGGGAAGTTCAAGTTTACCAGTTACAGAA GTGAATACTTACAATCTCAGTGCTAACACTTTTCCTCTGGGTGATGAAGATGCAGAGTAT GTTAGAAAGGATGGAACGAAGGAAGATAGATCGGAGGATCACTATCCGGAATCTTCCAAT AAGGTTTCTGTTACAACGACTGGGATAAGTAAAAGCGAAATCCCTCTGGTGTATGCAGGA GATACAGGTGACAATTCTAGAATTCTGAGTGACTGCCGTGAATGCAAAACAAGGTCGGAT GATTCAGTGGTGGATAAAGAAAGTGAGTTTGAGAGCGCTTCAGATGATGTAGAAAACAAG TTTGATTCCTCATCTTTGGTTCCCTTGACTGGTTACAAGGTGCATTCTCTAACGGTAGAT ACGAACCAAAACTGTCAGCTGGTAAGCTCTATCACGCCGTGTACGGAAGGAATTTTACTA CTTTGGAAGCAGGCTATTGAAAGTGGGAGTGCAGTTGTATTAAATGATTCTAGTATCGAT GCTGACATTGTCTATCAAAGGGCTGTTGCTCTCTCTACATCTGTCCCACCTGGACCAGTT TTTCAGCATCAACCTAAGAAAGTATCAGTTCAAAGACGCGGGGAAGAGGAAATTGGTGAT TTGGAGGTAGGATGCACCAAATTAGATACTCCAGCTTCTTCGAGAAAAGAAACTGTTGTT TCGAGTAGAAAGGTCAATTCAACAACGAGTACGAGAAAGGAGAAGAAGAAGGGTATTCGA AAAGATTATCTGAATGTAGTACCAAAAGGAAGCTTAGGAGTAGACGAGCTTGCCAAATTG CTAGCATAGCTTTATGAATGAATAACAATATTTCAACGATCAAGTCAATTATTCTTTTCT ATAATGTCGATATGTCATGGTATGTTTTCCTGTAATTTATCTATATATGTCAATATACTG TCTTTCCTTTTTGTTCTTTTAGTCATGCTGGTTCTCTTCAAGTATTTCTGCCATTTGATA ACTTGTAAACCCATAAATAGGCTCAATTACACGTGGCGATATGATAATTTTGTTGAGTAA GACTTACACATGCTAAAAAATTGATATTTGGAGAGCATATTGAAAAACATGAAGAGATAA GATGTTCATATAGTTTTCATTCCTGAAGGAATCCATTGTGTTTACACTAGTAGTAGTAGT ATAATCTTTGAAGAATGTCCACTTCATTCACTCATGGAACAAATGCCTATCTCCTTTCTC TGGAATCCAGGTTCTCTTAGATTGGAGGTAGAGACTTTGCGTCCAAACCATGTTCATTCT CTTCTGGGGTGCAGTATCTTTTCCAGAACCAATGATTTTGCCAAAGCAAGTATATTTCCT CTATGGGAACCTGCTTTGTCTCGGGCAAGAGGAAGAAGATGAAGCAGCTCATGATGAATA TCAAGCCCGCGAACAGCAGAAAGATTCCATATTTGAGGTGACAGAGAGACACAAGGAAGC ATTGTGCAATGAGGGCAGTGAAGATCATATTGACACAAACCACCATGCTCTGTCCTGCAG ATCTTGTTTCCAGGGGAAATAGTTCACTTGGCACCAGCCAACCTAAGGGACCCCAAGACC TTCCATATGCGACAACAAATATGCAGATTATGACTACAAGGAAGATGCCAATTCCTTTTG GGAGTTCTTCACCTTCTCCAAACTTCAAAGCCAGAGTAACAGCAACCGCTACCTGTGAAA CAAACTTCCAGTCAAGTATATGCTATAACGAAAGCCTTGTCAGGAAGAATTTCAAAGCAG AAAATTACCAAAACACATATCATTTCAACTCCAGCTTCCAGAAAGAAAGCTCTTCTTCCA AACTTGTCAACAAAAGCCATTGAAATGAATGTAGCTAGAACAAGTGCACCACTGGTTATA GCAGATGAATACAATGATGCTCCTGAGCCAAATCCTAAACTCTGAAATATGACAGGGGCG TAGAAAAGAATGGAGTTCATGCCGGTAAGCTGTTGGAATGCTGGGATCCCCAAAGCTGCT ATTACCAATTGGGGACGGTTTTTCCTCTTGAGGAGATTCCTGAATGGATCTTTTATGGCT CTCGCAGCATCACTTGCATCTTTAAGATCCGCAAACTCAGCATCAACTTTTGTGGTGCCA TTTCTGAGAGATACAGAGGGACTGCCTGATTGCCAAATCCAATGCCAACTCCAAGAAGAC ATCGACCAAGGATCAGCATTGCAATGTTCTTTGCAAAAGCATTAAGTATTGCACCAAGAA AAAAACTGACTGCTCCACAAAGTATACTAGCTCGACGCCCTTTGTTGCGGGTAACATGTG AAGCACCAAATGTCGAAACAAGTGCAGCAAAGTACAAAGAGGAAGTAAACAAGGTGAGTA TCTGATTGTCATATTTACAGTAATCAGTTTCTTTGAGATGTGCATGCTTCCTTCTGTACA CTTTGGGGAAAAACTCTTTCAAGAAATCATCCATGGAAGTCACCCCACCTTAAAAACCAC AAATTAGAATCAGAATTTTTCTTTCTACAATTCAAGTGTTTTTTTTTTGGCCTATCTGAC TAATTGATTCATAAAGCAAAAGACACAAAAAATCAATTTACTGATATCTACAAGCCTTTG TATTTTGTACATCTAGTAACAAATTTAGGTGTCTCGTTGTTTTCGAACAATGACTTGAGA AATACATTCCTAAACAGATCAGGAAAAAAAAGATGGTTTTTAATTAATACTCACCAGAAA CACCGAGATCGTAGCCAAATAGAGATCCTCCCATTGCTGCAACCACACAAGCAAAAATAA AATAGCCAGTTATCTTATACTCATAGAGATGAGCTCTTTTTCCTCCTTTATCATCACTAA ATCCTCCACCAGCCATACTGTTCTTCTTCTCTGTTTGATTTTCAAAAATGTAGAAACTAA TGTACTTCTATTTATGCATATCTTTACTACATCCACTTGCACTCTTTTAGTCAAAGTGTT TGATATAATATCTCTATTTCAGTTGTCACAAAAGTAAAAATATTTAAATTATTTTAAGGA AATAGATTAAGACAAATAAAAACGGATAAAATATTAATTATTGGGTAGGAATGTAAATAT ATGGCTGGTTATGTACGTTGCTCTCTTTATTTTCTAAGGCAAGTTGGAGTATTGCTTTGA TCTCCTACCATTTTTGTCTATAGCGTTGACCCAACTGTCCTAACAATAGAAAATTGCTGG CAGTCTTAACTGACTACATACTAACCTTCTCTCTCT