Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g016310.1.1
CDS Infomation

LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G59080.1)
Sequence

ATGGTGACAAAGCTCAGTATTTTAATTTTTGTTTTGTTGAGTTTATTCTCATTTGGTTTT
GTGGTGTCTAGGGAATTTGGGATCAATCTGAATACTAGTGCTTCTGGTATTGAATTCCCT
CAACATCCAAGTTTCAATGTTGTTTCTTCTTCTACTAACTCTGGTTGCAATCATGTAAAA
TCGACAAGTATGTTAACCCGAGAAGAACAAACTAGTCAAGATGCTCAGCCAAAAGAAGCA
GTCAAGTTTCATTTAAGGCATAGATCAGCTGGTAAAACTAGAGAGGTTAAAAACTCTGTT
TTTGAGTCTACATCAAGGGATTTAGGTAGAATTCAGACATTGCATACAAGGATTGTTGAC
AAAAAGAATCAAAACTCTGTTTCAAGATTGGGTGAAAAAACTGTTATTTCTTCACAATTT
GAGCTTTCAGGAAAACTAATGGCGACGTTGGAGTCAGGGGTGAGTCATGGATCAGGGGAA
TATTTCATGGATGTTTTTGTTGGTACACCTCCTAAGCACTTCTCTTTGATTCTTGATACT
GGTAGTGATCTTAATTGGATTCAATGTGTACCTTGTTACGATTGTTTTGAACAAAATGGT
CCTTATTATGATCCTAAAGATTCTTCTTCTTTTACTAATATAACTTGTCATGATCCAATG
TGTCATCTTGTTTCATCTCCTGACCCTCCACAGCCTTGTAAGACTGAGAATCAAACATGC
CCTTATTACTATTGGTATGGAGATAGCTCAAATACGACTGGTGATTTCGCGCTTGAGACT
TTCTCCGTTAATCTCACAACCCCTAGTGGGAACTCTGAGATCAAGAAAGTGGAAAATGTG
ATGTTTGGTTGTGGTCATTGGAATAGAGGTTTGTTTCATGGTGCTGCAGGTTTGTTAGGA
CTTGGTAAAGGACCACTTTCGTTTTCGTCTCAGCTACAATCTTTATATGGACATTCTTTT
TCGTATTGTCTAGTCAATAGGAATAGCAACTCTGGTATCAGCAGTAAACTGATTTTTGGC
GAAGATAAGGAGCTTTTGAAACATCCAAACTTGAACTTCACTTCATTAGTTGGTGGGAAA
GAAAATCCCGCAGAAACGTTCTACTATGTGCAGATCAAATCGATCATAGTTGGAGACCAA
GTACTAAAGATACCGGAGGAGACGTGGAGTATGTCTCCACAAGGTGTTGGTGGCACAATC
ATTGATTCAGGAACCACTTTGAGTTATTTCGTCGAACCAGCATATGAGATGATAAAAGAG
GCATTTGTTAACAAAGTGAAAGGATATCCATTAATACAAGATTTTCCCATTCTTAGACCA
TGTTACAATGTGTCTGGAGTGGAGAATCTTGAATTGCCCTCATTTGGAATAACTTTTAGT
GATGGAGCTGTATGGAATTTCCCCGTCGAGAACTACTTCATCAAACTTGATCCAGAAGAC
ATTGTTTGTTTAGCAATTTTAGGTACTCCTAACTCTGCCATGTCGATAATTGGTAACTAC
CAACAACAGAATTTTCATATCTTATATGATACAAAAAGGTCTAGGCTGGGATATGCACCA
ACAAACTGTGCTGATGCCTGA

Peptide Sequence

PEP ID

Solyc05g016310.1.1
PEP Infomation

LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G59080.1)
Sequence

MVTKLSILIFVLLSLFSFGFVVSREFGINLNTSASGIEFPQHPSFNVVSSSTNSGCNHVK
STSMLTREEQTSQDAQPKEAVKFHLRHRSAGKTREVKNSVFESTSRDLGRIQTLHTRIVD
KKNQNSVSRLGEKTVISSQFELSGKLMATLESGVSHGSGEYFMDVFVGTPPKHFSLILDT
GSDLNWIQCVPCYDCFEQNGPYYDPKDSSSFTNITCHDPMCHLVSSPDPPQPCKTENQTC
PYYYWYGDSSNTTGDFALETFSVNLTTPSGNSEIKKVENVMFGCGHWNRGLFHGAAGLLG
LGKGPLSFSSQLQSLYGHSFSYCLVNRNSNSGISSKLIFGEDKELLKHPNLNFTSLVGGK
ENPAETFYYVQIKSIIVGDQVLKIPEETWSMSPQGVGGTIIDSGTTLSYFVEPAYEMIKE
AFVNKVKGYPLIQDFPILRPCYNVSGVENLELPSFGITFSDGAVWNFPVENYFIKLDPED
IVCLAILGTPNSAMSIIGNYQQQNFHILYDTKRSRLGYAPTNCADA*

Transcript Sequence

Transcript ID

Solyc05g016310.1.1
Transcript Infomation

LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G59080.1)
Sequence

ATGGTGACAAAGCTCAGTATTTTAATTTTTGTTTTGTTGAGTTTATTCTCATTTGGTTTT
GTGGTGTCTAGGGAATTTGGGATCAATCTGAATACTAGTGCTTCTGGTATTGAATTCCCT
CAACATCCAAGTTTCAATGTTGTTTCTTCTTCTACTAACTCTGGTTGCAATCATGTAAAA
TCGACAAGTATGTTAACCCGAGAAGAACAAACTAGTCAAGATGCTCAGCCAAAAGAAGCA
GTCAAGTTTCATTTAAGGCATAGATCAGCTGGTAAAACTAGAGAGGTTAAAAACTCTGTT
TTTGAGTCTACATCAAGGGATTTAGGTAGAATTCAGACATTGCATACAAGGATTGTTGAC
AAAAAGAATCAAAACTCTGTTTCAAGATTGGGTGAAAAAACTGTTATTTCTTCACAATTT
GAGCTTTCAGGAAAACTAATGGCGACGTTGGAGTCAGGGGTGAGTCATGGATCAGGGGAA
TATTTCATGGATGTTTTTGTTGGTACACCTCCTAAGCACTTCTCTTTGATTCTTGATACT
GGTAGTGATCTTAATTGGATTCAATGTGTACCTTGTTACGATTGTTTTGAACAAAATGGT
CCTTATTATGATCCTAAAGATTCTTCTTCTTTTACTAATATAACTTGTCATGATCCAATG
TGTCATCTTGTTTCATCTCCTGACCCTCCACAGCCTTGTAAGACTGAGAATCAAACATGC
CCTTATTACTATTGGTATGGAGATAGCTCAAATACGACTGGTGATTTCGCGCTTGAGACT
TTCTCCGTTAATCTCACAACCCCTAGTGGGAACTCTGAGATCAAGAAAGTGGAAAATGTG
ATGTTTGGTTGTGGTCATTGGAATAGAGGTTTGTTTCATGGTGCTGCAGGTTTGTTAGGA
CTTGGTAAAGGACCACTTTCGTTTTCGTCTCAGCTACAATCTTTATATGGACATTCTTTT
TCGTATTGTCTAGTCAATAGGAATAGCAACTCTGGTATCAGCAGTAAACTGATTTTTGGC
GAAGATAAGGAGCTTTTGAAACATCCAAACTTGAACTTCACTTCATTAGTTGGTGGGAAA
GAAAATCCCGCAGAAACGTTCTACTATGTGCAGATCAAATCGATCATAGTTGGAGACCAA
GTACTAAAGATACCGGAGGAGACGTGGAGTATGTCTCCACAAGGTGTTGGTGGCACAATC
ATTGATTCAGGAACCACTTTGAGTTATTTCGTCGAACCAGCATATGAGATGATAAAAGAG
GCATTTGTTAACAAAGTGAAAGGATATCCATTAATACAAGATTTTCCCATTCTTAGACCA
TGTTACAATGTGTCTGGAGTGGAGAATCTTGAATTGCCCTCATTTGGAATAACTTTTAGT
GATGGAGCTGTATGGAATTTCCCCGTCGAGAACTACTTCATCAAACTTGATCCAGAAGAC
ATTGTTTGTTTAGCAATTTTAGGTACTCCTAACTCTGCCATGTCGATAATTGGTAACTAC
CAACAACAGAATTTTCATATCTTATATGATACAAAAAGGTCTAGGCTGGGATATGCACCA
ACAAACTGTGCTGATGCCTGA