Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g015610.3.1
CDS Infomation	Histidine kinase CHK3 (AHRD V3.3 *** A0A0A1WDG8_NICAT)
Sequence	ATGAATGGTGAAGTTATGACTAGCAGCAAGACTTTGCTTGGTGATGGAGAGCACATAGTG AAGAAATTGTGGGATTTGAGTGCTAAGATTTATCATTGTTACCCTCAGTATGTTGGAAAT AGGAAAGTGGGAAACAAGTGGTGGAGGAAGCTTTTGATAGTATGGTTATTATTTTGGATT GTTGTTTCTTTTTCAGTCTTGTGGTATATGAACTCTAAAGCTGTTGAAAAGAGAAAAGAA ACACTCACAAGTATGTGTGATGAAAGAGCTAGGATGTTACAAGATCAGTTTAATGTTAGT ATGAACCATGTGCAGGCCATGTCCATTCTCATCTCAACTTTCCACCATGCCAGGAATCCT TCTGCTATTGATCAGTGTACTTTTGCAAGCTATACAGAAAGAACAGCATTTGAGAGGCCT CTTACAAGTGGGGTGGCATATGCAGTAAGAGTGCTCCATTCAGAAAGAAAAGAGTTTGAG AAGCGACACGGTTGGAGTATTAAGAGAATGGATACACGTGAACCAACTCCAGTTCACAAA GACAATGAGTATGATAGAGATGGCCTGGAGCCATCTCCAATTCAGGCAGAATATGCCCCT GTTATTTTTGCACAGGATACGATTGCACATGTAATTTCTGTTGATATGCTCTCTGGAAAG GAAGATCGCGAGAATGTTTTACGTGCAAGGGAATCAGGAAAGGGTGTCCTCACAGCTCCA TTCAGACTACTTAAAACAAATCGCCTTGGGGTGATAAAGACATTTGCAGTTTACAAAACT GATCTTCCTTCTAATGCAACTCCAAATGAAAGGATCCAGGCAACTGACGGGTATCTTGGT GGAGTACTTGACATTGAATCACTTGTAGAGAAGCTTCTTCAGCAACTTGCAAGCAAACAA ACTATCCTTGTAAACGTCTATGATACAACTAATATCTCCCACCCTATTAGCATGTATGGT TCAAATGTGTCGGGTGATGGTCTGGAGCATGTCAGTGCCCTCAACTTTGGGGATCCATTT AGAAGGCATGAGATGCGTTGCAGATTCAAACAGAAACCACCGTGGCCTTGGCTAGCCATC ACAACAGCGACAGGAATCCTCATAATTGCATTGCTTATAGGGCAAATATTTCATGCAACC ATCAACAGAATCGCCAAAGTTGAGGATGATTATCATCAGATGATGATGCTGAAAAAACGT GCAGAGGCTGCTGATGTTGCAAAGTCACAGTTTCTTGCTACTGTTTCCCATGAAATCAGG ACCCCCATGAATGGTGTTCTTGGCATGCTTCATATGCTTACGGACACCAATCTAGATGTG ACGCAACAAGATTATGTCAGCACTGCTCAGGCCAGTGGTAAAGCTTTAGTTTCGCTCATA AATGAGGTTTTGGACCAAGCAAAGATTGAATCTGGTAAGCTTGAGCTCGACGCAGTTTGT TTTGACGTGAGAGATACGCTGGATGAGGTTCTGTCACTCTTTTCGGGGAAATCTCAAGAA AAAGGAGTTGAGTTGGCCGGTTACATCTCTGATAAGGTTCCTGATGTACTCATTGGTGAC CCTGGACGGTTTCGTCAGATTATCACAAACTTGGTGGGGAACTCTATCAAATTCACTGAA AAAGGTCATATATTTGTGACGGTCCATCTCGTCGAGGAAGTGACAGAGTCAGCCGAGGAG TTCAAGGTAAATTCATTGTTCAAGAGCACTTTGAGTGGATCGCCTGTAGCCGATAAGCGA CAGAGCTGGAGAAGTTTCATGGGTTTCAATCAAGAAGGATCTTCTTTCACATCTTCCTCG TCGGACCAGATCAATCTAATGGTGTCAGTAGAAGACACTGGTGTTGGAATTCCTTTAGAT GCTCAATCTCGTATATTCACCCCCTTCATGCAGGTTGGTCCTTCTATTGCTCGCACCCAT GGGGGAACTGGTATTGGACTTAGCATAAGCAAATGTTTGGTACAGCTTATGAAAGGTGAA ATTGGGTTTGTAAGTTTGCCAAAGATTGGATCCACCTTTACTTTTACTGCTGTTTTCACC AATAGCCGCAATAATTGGAATGAGAAGAAGAGCCAGCAAATAAACAATCAATCGAACTCT ATTTCTTCAGATTTCCATGGCTTGAGAGCCTTAATTGTCGACCCAAGAACTGTCCGTGCA AGGGTCTCACAGTATCACATGAAACGACTTGGAGTCCATACTGAAGTGGTCTCAGATTTG AATCGTGGTTTGTCTCATGTAAGAACTGAAAATGGAGTTACGAATATGATCCTCATTGAA CAGGAAGTCTGGGATGCTGATTTGGGAAAGTCAAGTCTTTTTGTCAAAAACTTAAGAAAG ATCAACGCCAGTAGTTCTCCCAAACTTTTCATATTAGCCAATTCTATAAATTCTAGCCGA GCGGGTGTCTCAGTCAACGGTTTTCCTACTCCATTTATCATCATGAAGCCATTAAGAGCA AGTATGCTTGCTGCATCACTCCAACGTGCCATGGGCGTTGGTAACAAGGGAAATTGTACA AATGGAGAGCTCTCTGGTATCTCTCTTTCCAAGCTCCTTCAGGGGAGAAAAATTTTGATT GTGGACGACAACAACGTGAACCTTAGAGTAGCTGCTGCTGCACTGAAGAAGTATGGTGCT GATGTTATCTGCACAGACAGTGGGAAAAAAGCACTCACTTTTTTACAACCACCTCATCAA TTTGATGCCTGTTTCATGGATATTCAGATGCCAGAAATGGATGGGTTTCAGGCTACAAAA ATAATCCGCGAAATGGAATCTGATATCAATAGCCGTATCAAACTTGGGCAACTACCTCCT GAAGCATACGGAAATGTTTCAAGCTGGAAAGTGCCCATTCTGGCCATGACTGCTGACGTA ATTCAAGCTACAAATGAACTGTGTCAAAAATGTGGAATGGATGGTTATGTTTCAAAGCCA TTTGAGGCTGAGCAGCTTTATGAAGAAGTATCACGCTTTTTCCAGATCAAGCCAACTCAG AATACCTGA

Peptide Sequence

PEP ID	Solyc05g015610.3.1
PEP Infomation	Histidine kinase CHK3 (AHRD V3.3 *** A0A0A1WDG8_NICAT)
Sequence	MNGEVMTSSKTLLGDGEHIVKKLWDLSAKIYHCYPQYVGNRKVGNKWWRKLLIVWLLFWI VVSFSVLWYMNSKAVEKRKETLTSMCDERARMLQDQFNVSMNHVQAMSILISTFHHARNP SAIDQCTFASYTERTAFERPLTSGVAYAVRVLHSERKEFEKRHGWSIKRMDTREPTPVHK DNEYDRDGLEPSPIQAEYAPVIFAQDTIAHVISVDMLSGKEDRENVLRARESGKGVLTAP FRLLKTNRLGVIKTFAVYKTDLPSNATPNERIQATDGYLGGVLDIESLVEKLLQQLASKQ TILVNVYDTTNISHPISMYGSNVSGDGLEHVSALNFGDPFRRHEMRCRFKQKPPWPWLAI TTATGILIIALLIGQIFHATINRIAKVEDDYHQMMMLKKRAEAADVAKSQFLATVSHEIR TPMNGVLGMLHMLTDTNLDVTQQDYVSTAQASGKALVSLINEVLDQAKIESGKLELDAVC FDVRDTLDEVLSLFSGKSQEKGVELAGYISDKVPDVLIGDPGRFRQIITNLVGNSIKFTE KGHIFVTVHLVEEVTESAEEFKVNSLFKSTLSGSPVADKRQSWRSFMGFNQEGSSFTSSS SDQINLMVSVEDTGVGIPLDAQSRIFTPFMQVGPSIARTHGGTGIGLSISKCLVQLMKGE IGFVSLPKIGSTFTFTAVFTNSRNNWNEKKSQQINNQSNSISSDFHGLRALIVDPRTVRA RVSQYHMKRLGVHTEVVSDLNRGLSHVRTENGVTNMILIEQEVWDADLGKSSLFVKNLRK INASSSPKLFILANSINSSRAGVSVNGFPTPFIIMKPLRASMLAASLQRAMGVGNKGNCT NGELSGISLSKLLQGRKILIVDDNNVNLRVAAAALKKYGADVICTDSGKKALTFLQPPHQ FDACFMDIQMPEMDGFQATKIIREMESDINSRIKLGQLPPEAYGNVSSWKVPILAMTADV IQATNELCQKCGMDGYVSKPFEAEQLYEEVSRFFQIKPTQNT*

Transcript Sequence

Transcript ID	Solyc05g015610.3.1
Transcript Infomation	Histidine kinase CHK3 (AHRD V3.3 *** A0A0A1WDG8_NICAT)
Sequence	ATGAGAATATGTTCATTTAATAATTTCTTTTATTATTTGGATGTAGACATAAATTGGATA GAGAGATAACAGACCATGGCAGCAGACATTTTCTACCACCACCATATTCTTTTCATCTTT GCTTTTACAGATTCTTTATGAGTTTATATGAACCAAAACTCTTCTTTTTAGTTATTCATA AAAGAAAATTTCTTAATTATTGACAAAAGTTGTGTTACTTGAATAACAATTAGCTTGTAA TTTTCATATTAACGAAACATCCAAGATTCTTTGTCTGGGGTTGTTTTTTGCTTTATCCTG GTGTAATTACTTTGGAGAATCTTGATTTTGGCCCATTGTTTTTTGAGCTTAACTTGGTAA TAATCAAATTTGGAATCTTTGGGATGGGATCCCTTGATTCTTTCTTTGGCTTTTTGCTGT TTCTTATCTTGTTCATGAATTCTGGCATTCCCCTAATTTGAAGGAAGATAGCATCAAATT CTAACTTTTCACCTTCTTTATTCCTCTCATCACATCTTCTTAACTAAAGTTTGAAACTTT ACTGATGTTAGGTTCAGTAGACTGCTGATTCTTGAAAAGGGGTTAGGTGTTTGATGTGTT TTGGATGAGTTTGTTTTATGTTATTGGGTTTGGTTTGAAATTGGGTAGCCTAATTTTGAC TCTATGTTGCTGGTTTCTGTCTCTGATTTTTTCCATGAATGGTGAAGTTATGACTAGCAG CAAGACTTTGCTTGGTGATGGAGAGCACATAGTGAAGAAATTGTGGGATTTGAGTGCTAA GATTTATCATTGTTACCCTCAGTATGTTGGAAATAGGAAAGTGGGAAACAAGTGGTGGAG GAAGCTTTTGATAGTATGGTTATTATTTTGGATTGTTGTTTCTTTTTCAGTCTTGTGGTA TATGAACTCTAAAGCTGTTGAAAAGAGAAAAGAAACACTCACAAGTATGTGTGATGAAAG AGCTAGGATGTTACAAGATCAGTTTAATGTTAGTATGAACCATGTGCAGGCCATGTCCAT TCTCATCTCAACTTTCCACCATGCCAGGAATCCTTCTGCTATTGATCAGTGTACTTTTGC AAGCTATACAGAAAGAACAGCATTTGAGAGGCCTCTTACAAGTGGGGTGGCATATGCAGT AAGAGTGCTCCATTCAGAAAGAAAAGAGTTTGAGAAGCGACACGGTTGGAGTATTAAGAG AATGGATACACGTGAACCAACTCCAGTTCACAAAGACAATGAGTATGATAGAGATGGCCT GGAGCCATCTCCAATTCAGGCAGAATATGCCCCTGTTATTTTTGCACAGGATACGATTGC ACATGTAATTTCTGTTGATATGCTCTCTGGAAAGGAAGATCGCGAGAATGTTTTACGTGC AAGGGAATCAGGAAAGGGTGTCCTCACAGCTCCATTCAGACTACTTAAAACAAATCGCCT TGGGGTGATAAAGACATTTGCAGTTTACAAAACTGATCTTCCTTCTAATGCAACTCCAAA TGAAAGGATCCAGGCAACTGACGGGTATCTTGGTGGAGTACTTGACATTGAATCACTTGT AGAGAAGCTTCTTCAGCAACTTGCAAGCAAACAAACTATCCTTGTAAACGTCTATGATAC AACTAATATCTCCCACCCTATTAGCATGTATGGTTCAAATGTGTCGGGTGATGGTCTGGA GCATGTCAGTGCCCTCAACTTTGGGGATCCATTTAGAAGGCATGAGATGCGTTGCAGATT CAAACAGAAACCACCGTGGCCTTGGCTAGCCATCACAACAGCGACAGGAATCCTCATAAT TGCATTGCTTATAGGGCAAATATTTCATGCAACCATCAACAGAATCGCCAAAGTTGAGGA TGATTATCATCAGATGATGATGCTGAAAAAACGTGCAGAGGCTGCTGATGTTGCAAAGTC ACAGTTTCTTGCTACTGTTTCCCATGAAATCAGGACCCCCATGAATGGTGTTCTTGGCAT GCTTCATATGCTTACGGACACCAATCTAGATGTGACGCAACAAGATTATGTCAGCACTGC TCAGGCCAGTGGTAAAGCTTTAGTTTCGCTCATAAATGAGGTTTTGGACCAAGCAAAGAT TGAATCTGGTAAGCTTGAGCTCGACGCAGTTTGTTTTGACGTGAGAGATACGCTGGATGA GGTTCTGTCACTCTTTTCGGGGAAATCTCAAGAAAAAGGAGTTGAGTTGGCCGGTTACAT CTCTGATAAGGTTCCTGATGTACTCATTGGTGACCCTGGACGGTTTCGTCAGATTATCAC AAACTTGGTGGGGAACTCTATCAAATTCACTGAAAAAGGTCATATATTTGTGACGGTCCA TCTCGTCGAGGAAGTGACAGAGTCAGCCGAGGAGTTCAAGGTAAATTCATTGTTCAAGAG CACTTTGAGTGGATCGCCTGTAGCCGATAAGCGACAGAGCTGGAGAAGTTTCATGGGTTT CAATCAAGAAGGATCTTCTTTCACATCTTCCTCGTCGGACCAGATCAATCTAATGGTGTC AGTAGAAGACACTGGTGTTGGAATTCCTTTAGATGCTCAATCTCGTATATTCACCCCCTT CATGCAGGTTGGTCCTTCTATTGCTCGCACCCATGGGGGAACTGGTATTGGACTTAGCAT AAGCAAATGTTTGGTACAGCTTATGAAAGGTGAAATTGGGTTTGTAAGTTTGCCAAAGAT TGGATCCACCTTTACTTTTACTGCTGTTTTCACCAATAGCCGCAATAATTGGAATGAGAA GAAGAGCCAGCAAATAAACAATCAATCGAACTCTATTTCTTCAGATTTCCATGGCTTGAG AGCCTTAATTGTCGACCCAAGAACTGTCCGTGCAAGGGTCTCACAGTATCACATGAAACG ACTTGGAGTCCATACTGAAGTGGTCTCAGATTTGAATCGTGGTTTGTCTCATGTAAGAAC TGAAAATGGAGTTACGAATATGATCCTCATTGAACAGGAAGTCTGGGATGCTGATTTGGG AAAGTCAAGTCTTTTTGTCAAAAACTTAAGAAAGATCAACGCCAGTAGTTCTCCCAAACT TTTCATATTAGCCAATTCTATAAATTCTAGCCGAGCGGGTGTCTCAGTCAACGGTTTTCC TACTCCATTTATCATCATGAAGCCATTAAGAGCAAGTATGCTTGCTGCATCACTCCAACG TGCCATGGGCGTTGGTAACAAGGGAAATTGTACAAATGGAGAGCTCTCTGGTATCTCTCT TTCCAAGCTCCTTCAGGGGAGAAAAATTTTGATTGTGGACGACAACAACGTGAACCTTAG AGTAGCTGCTGCTGCACTGAAGAAGTATGGTGCTGATGTTATCTGCACAGACAGTGGGAA AAAAGCACTCACTTTTTTACAACCACCTCATCAATTTGATGCCTGTTTCATGGATATTCA GATGCCAGAAATGGATGGGTTTCAGGCTACAAAAATAATCCGCGAAATGGAATCTGATAT CAATAGCCGTATCAAACTTGGGCAACTACCTCCTGAAGCATACGGAAATGTTTCAAGCTG GAAAGTGCCCATTCTGGCCATGACTGCTGACGTAATTCAAGCTACAAATGAACTGTGTCA AAAATGTGGAATGGATGGTTATGTTTCAAAGCCATTTGAGGCTGAGCAGCTTTATGAAGA AGTATCACGCTTTTTCCAGATCAAGCCAACTCAGAATACCTGAAGAGCATTCCTGATGAA TTCTTACGATCAACCTCGAGTAGAAATGCCATCGACTTCATGGTGCCTCAAGGTCGTTCA CACTTTCTTTTTTTCCAACTGTGAGTTCTCTATGTCCCAAGCACGATTACTTCTGCAAGG TTAGATACTTGTTCAAAATCTTGGTGTCCACCACTTGGATTCGACTGCATTCTTTTTCAG GGAATGAATCTCTGAAATGTACATAAAACTTGAAGGATTGACATATTCCAAGCTCGAGGA GCGGAGGAGGAGTTGGGCTTCTCTCATCAAGAAAGAAATATTACAATCCTTTAGATGCTT TAGGCTTGTTAGAAAGGATGTTTGCCTGGAGAGTGGTTATATAGTTTATATAGCAACAAA CATTGTTTGTAACAGAAATATGTTGTCATGTATATTCTCAAATCTACATAGGGAATTAGT CATAATAGGTGAAAGAAAAAGTTTTAGTTCAGTAAGTCATAGTTGGCATAAACTTAGGGA CAGCAAACAGTTGAATTTGCTATTTTTTCCCCCCCCCTTTTGTGTATAGTAGAAAAAACA AGTTTGATGTAGGCACATTTTGATATCAAGTATAAAAGTAAGTTGCAATTATTTGCATAT GTATAGTTTATATGTGAACTCGGTCAATATTTGTGGAGCCAAATTTTGACCCATTTTGTA CAGTAAATGCAACTTGTTTACAGTAAAGAGTTTGTTGCCA