Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g015520.3.1
CDS Infomation

F-box family protein (AHRD V3.3 *** B8Y9B5_PONTR)
Sequence

ATGGAAGTGTTGGCCATGCTGAGGCAACTCATTGGACAAGTTAAACAACTCTTAGAACTT
CAATCTTCATCTCCATCTTCATCATCGCTTCTTGCTGTTCCTCCTAACATCTCTTTTCAT
CTTCAAACGCCACCACTTGTACACCTACCAAGATGTTATTTTCTGAATCTTGATGAAAAT
TCTGCCGAAGACAGTTGCTACAATATCATCATGACTGCTGGAAAATCTGAAAATCTCAAG
ATGTTGGAACCAGGAAAGCCTCCACCAAAGAAGAAAGCCCGGAAGGAGAGAAATCAGGGA
AAAGTGACTGGAACTTCATGCTCCATCGAGAATTTGGATCAGCAAATTTGGAAAGAATTT
CCTGAAGACCTATTTGAAGCTGTTGTTGCAAGACTACCAGTTGCCACTTTTTTCCGCTTC
AGATTAGTTTGCCGAAAATGGAACTCAATGCTGACGTCCCAAAGTTTTTCTGAAGAGTGT
GCCCAAGTTCGTCAACCACAACCATGGTTCTACACCATTACTCATGAAAACGTGAATACT
GGAGCCATGTATGACCCAACATTGAAGAAATGGCATCATCCTACTATACCTGCACTGCCA
ACCAAGTTGATAGTCTTGCCAGTTGCTTCTGCAGGAGGTCTTGTCTGTTTCCTTGATATT
GGACATAGGAGCTTCTACGTATGCAACCCTCTCACTAGGTCTTTCAAAGAGCTACCAGCC
AGATCAGTTAAAGTGTGGTCCCGTGTGGCAGTAGGTATGACATTGTGTGGGAAATCAGCC
GGTGAGGGATACAATATCCTTTGGGTTGGTTGCGATGGAGAGTTTGAAGTTTACGACTCC
AGAAATAACTCTTGGGCTCGTCCAGGAACCATGACGTCGAATATTAAGCTCCCTCTGGCA
CTCAACTTCAAGTCGCAGACAGTGTCCATCGGTAGTAAACTTTACTTCATGCGCTCGGAC
CCTGATGGGATCGTGTCCTATGACGTGGTTTCTGGGGTTTGGAAACAGTTCATTATCCCT
GCCCCTCTACATTTGAGTGATCATACACTAGCAGAATGTGGGGGGCGCATAATGCTTGTG
GGTCTGCTGTCAAAGAACGCAGCCACTTGCGTGTGCATATGGGAGCTGCAAAAGATGACT
CTTTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGAGTTTTATGGAAAG
CACGTTCGAATGACTTGCTTGGGTAACAAAGGTTTGCTCATGCTATCGCTAAGATCAAGA
CAAATGAACCGTCTAGTTACATATGATTTCTCAAGCAGAGAATGGATGAAGGTCCCTGGT
TGCGTTTTGCCACGTGGGAAAAAGAGGCAATGGATCGCATGTGGGACTGCTTTTCATCCC
TGTCTAACAGCTGTGGCTTGA

Peptide Sequence

PEP ID

Solyc05g015520.3.1
PEP Infomation

F-box family protein (AHRD V3.3 *** B8Y9B5_PONTR)
Sequence

MEVLAMLRQLIGQVKQLLELQSSSPSSSSLLAVPPNISFHLQTPPLVHLPRCYFLNLDEN
SAEDSCYNIIMTAGKSENLKMLEPGKPPPKKKARKERNQGKVTGTSCSIENLDQQIWKEF
PEDLFEAVVARLPVATFFRFRLVCRKWNSMLTSQSFSEECAQVRQPQPWFYTITHENVNT
GAMYDPTLKKWHHPTIPALPTKLIVLPVASAGGLVCFLDIGHRSFYVCNPLTRSFKELPA
RSVKVWSRVAVGMTLCGKSAGEGYNILWVGCDGEFEVYDSRNNSWARPGTMTSNIKLPLA
LNFKSQTVSIGSKLYFMRSDPDGIVSYDVVSGVWKQFIIPAPLHLSDHTLAECGGRIMLV
GLLSKNAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHVRMTCLGNKGLLMLSLRSR
QMNRLVTYDFSSREWMKVPGCVLPRGKKRQWIACGTAFHPCLTAVA*

Transcript Sequence

Transcript ID

Solyc05g015520.3.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** B8Y9B5_PONTR)
Sequence

AATAAGTATCGCACGAACAAACAAACCCCTCAAAGGGATTTTTCCTTTGAGAAGAGAAGA
AGAAGAAGAATGTAATAGGGCCTGACCCAGAAGGGCATGGAAGTGTTGGCCATGCTGAGG
CAACTCATTGGACAAGTTAAACAACTCTTAGAACTTCAATCTTCATCTCCATCTTCATCA
TCGCTTCTTGCTGTTCCTCCTAACATCTCTTTTCATCTTCAAACGCCACCACTTGTACAC
CTACCAAGATGTTATTTTCTGAATCTTGATGAAAATTCTGCCGAAGACAGTTGCTACAAT
ATCATCATGACTGCTGGAAAATCTGAAAATCTCAAGATGTTGGAACCAGGAAAGCCTCCA
CCAAAGAAGAAAGCCCGGAAGGAGAGAAATCAGGGAAAAGTGACTGGAACTTCATGCTCC
ATCGAGAATTTGGATCAGCAAATTTGGAAAGAATTTCCTGAAGACCTATTTGAAGCTGTT
GTTGCAAGACTACCAGTTGCCACTTTTTTCCGCTTCAGATTAGTTTGCCGAAAATGGAAC
TCAATGCTGACGTCCCAAAGTTTTTCTGAAGAGTGTGCCCAAGTTCGTCAACCACAACCA
TGGTTCTACACCATTACTCATGAAAACGTGAATACTGGAGCCATGTATGACCCAACATTG
AAGAAATGGCATCATCCTACTATACCTGCACTGCCAACCAAGTTGATAGTCTTGCCAGTT
GCTTCTGCAGGAGGTCTTGTCTGTTTCCTTGATATTGGACATAGGAGCTTCTACGTATGC
AACCCTCTCACTAGGTCTTTCAAAGAGCTACCAGCCAGATCAGTTAAAGTGTGGTCCCGT
GTGGCAGTAGGTATGACATTGTGTGGGAAATCAGCCGGTGAGGGATACAATATCCTTTGG
GTTGGTTGCGATGGAGAGTTTGAAGTTTACGACTCCAGAAATAACTCTTGGGCTCGTCCA
GGAACCATGACGTCGAATATTAAGCTCCCTCTGGCACTCAACTTCAAGTCGCAGACAGTG
TCCATCGGTAGTAAACTTTACTTCATGCGCTCGGACCCTGATGGGATCGTGTCCTATGAC
GTGGTTTCTGGGGTTTGGAAACAGTTCATTATCCCTGCCCCTCTACATTTGAGTGATCAT
ACACTAGCAGAATGTGGGGGGCGCATAATGCTTGTGGGTCTGCTGTCAAAGAACGCAGCC
ACTTGCGTGTGCATATGGGAGCTGCAAAAGATGACTCTTTTGTGGAAGGAGGTTGACAGA
ATGCCAAACATATGGTGCTTGGAGTTTTATGGAAAGCACGTTCGAATGACTTGCTTGGGT
AACAAAGGTTTGCTCATGCTATCGCTAAGATCAAGACAAATGAACCGTCTAGTTACATAT
GATTTCTCAAGCAGAGAATGGATGAAGGTCCCTGGTTGCGTTTTGCCACGTGGGAAAAAG
AGGCAATGGATCGCATGTGGGACTGCTTTTCATCCCTGTCTAACAGCTGTGGCTTGATTT
GGACTGCCCAGTAAAGTTGTAGTCCCAGCAGGGCACTATACTAGCTTTTCCAATTATCAT
TTGCAGTCCAGTCTTCTGTGCTGATATAAGAAGAAAAACTATGTGTGAATTTATTGCCAC
TCTCTCTTGTATAAACATCTACTACTAGTTTTTGAGCTTTTGATTCATGAGGAGACTAAT
CTACAATGCTCTACCTACTATTTAACATTCAGCCAGCTTTAAAACTTTCAAGGGAGTTTA
TTGGGTT