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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g015300.3.1
CDS Infomation

BURP domain protein RD22 (AHRD V3.3 *** RD22_ARATH)
Sequence

ATGAAGTTGGAGGCCCTGACCATTTTCTTGCTTGCTTTTGTATTAGCAAGTACTTATGCA
GCGATACCTCCAGAGGTTTATTGGAATATAAAATTGCCGAATACTCAAATCCCCAAAGTC
ATCAAAGATTTCCTTCCTCACTCAGACGGTGTTGTTCCTGAGCCAAAACAAGAAAACACT
AAGAAGAAAGTGTACTATGGTTTAAGTGGATATATTCCCATTAGCTGGCATCATGCTGCT
AATTCGGAGTTTCAACGTTTCGTGCTGGAAAATTCCAGCACGAATCGTGCTACTAACAAG
AATATGATCAAACAAGTAACTGAAGGAAGTAGTTTCAAGACTAATCTTAATTATGATACT
TTGAAACAATACTTCTTTTTAGAGAAGGACTTGGAGAAGGGGAAACTTATCGAGTTTCCC
TCTCTCCTAAATAAAAACGAAGCACCATTTTTTCCTAGACATTTTGTTGAATCAATTCCC
TTCTCGATGGAAAAATACCCAGAGATCCTCAACCATTTCTTAATCGATAGTAAATCAAAG
GATGCTCAAACGATTAAGAAAACAATTAAACTTTGTGAAGAGTCAGAAGTGAAACATAAA
GAGAAGAAAACTTGTGTGACTTCTTTGGAGTCTATGGTAGATTTCGGGTTATCTGTACTT
GGGACAAACAATGTCCTCGCGATTACTTCTGAGGTACAAGGGGAAACTCAAGCATCCCAA
CGATACACAATTGAACAAGTTCAACAAGTATTTGATGGGGATAACATGGTTTGCCATAAG
CTTAACTACGCGTACGCTCTACATTATTGTCATGTTGGAGGAAGTACAACAACATATATG
GTATCTATGGTTGGTGTTGATGGAACAAAAGTGAAAGCTGTATCAGTGTGCCACAAAGAT
ACATCTTTTTGGAATGCACACGCGATCCCTTTTGTAGCTCTCAAGGTTAAGCCTGGAACT
ACGCCAATTTGTCATTTTCTTCAAGATGATCAAATAGTCTTTGTACCTATCTAA

Peptide Sequence

PEP ID

Solyc05g015300.3.1
PEP Infomation

BURP domain protein RD22 (AHRD V3.3 *** RD22_ARATH)
Sequence

MKLEALTIFLLAFVLASTYAAIPPEVYWNIKLPNTQIPKVIKDFLPHSDGVVPEPKQENT
KKKVYYGLSGYIPISWHHAANSEFQRFVLENSSTNRATNKNMIKQVTEGSSFKTNLNYDT
LKQYFFLEKDLEKGKLIEFPSLLNKNEAPFFPRHFVESIPFSMEKYPEILNHFLIDSKSK
DAQTIKKTIKLCEESEVKHKEKKTCVTSLESMVDFGLSVLGTNNVLAITSEVQGETQASQ
RYTIEQVQQVFDGDNMVCHKLNYAYALHYCHVGGSTTTYMVSMVGVDGTKVKAVSVCHKD
TSFWNAHAIPFVALKVKPGTTPICHFLQDDQIVFVPI*

Transcript Sequence

Transcript ID

Solyc05g015300.3.1
Transcript Infomation

BURP domain protein RD22 (AHRD V3.3 *** RD22_ARATH)
Sequence

TGGTAGATATTGCAATTTTTATGCCTATAAATAAAGGATAATTTCTGTTTCTGAATTCCA
TCAAAGTTCAGCTATTTCTACAATATCCATAGCAAATAATTTTCCTATGAAGTTGGAGGC
CCTGACCATTTTCTTGCTTGCTTTTGTATTAGCAAGTACTTATGCAGCGATACCTCCAGA
GGTTTATTGGAATATAAAATTGCCGAATACTCAAATCCCCAAAGTCATCAAAGATTTCCT
TCCTCACTCAGACGGTGTTGTTCCTGAGCCAAAACAAGAAAACACTAAGAAGAAAGTGTA
CTATGGTTTAAGTGGATATATTCCCATTAGCTGGCATCATGCTGCTAATTCGGAGTTTCA
ACGTTTCGTGCTGGAAAATTCCAGCACGAATCGTGCTACTAACAAGAATATGATCAAACA
AGTAACTGAAGGAAGTAGTTTCAAGACTAATCTTAATTATGATACTTTGAAACAATACTT
CTTTTTAGAGAAGGACTTGGAGAAGGGGAAACTTATCGAGTTTCCCTCTCTCCTAAATAA
AAACGAAGCACCATTTTTTCCTAGACATTTTGTTGAATCAATTCCCTTCTCGATGGAAAA
ATACCCAGAGATCCTCAACCATTTCTTAATCGATAGTAAATCAAAGGATGCTCAAACGAT
TAAGAAAACAATTAAACTTTGTGAAGAGTCAGAAGTGAAACATAAAGAGAAGAAAACTTG
TGTGACTTCTTTGGAGTCTATGGTAGATTTCGGGTTATCTGTACTTGGGACAAACAATGT
CCTCGCGATTACTTCTGAGGTACAAGGGGAAACTCAAGCATCCCAACGATACACAATTGA
ACAAGTTCAACAAGTATTTGATGGGGATAACATGGTTTGCCATAAGCTTAACTACGCGTA
CGCTCTACATTATTGTCATGTTGGAGGAAGTACAACAACATATATGGTATCTATGGTTGG
TGTTGATGGAACAAAAGTGAAAGCTGTATCAGTGTGCCACAAAGATACATCTTTTTGGAA
TGCACACGCGATCCCTTTTGTAGCTCTCAAGGTTAAGCCTGGAACTACGCCAATTTGTCA
TTTTCTTCAAGATGATCAAATAGTCTTTGTACCTATCTAAATAGGCTACGAAGATGCTAC
TTGGAGTTATGAAATAAGCGTTCAGACGCCATCCTAAATTGTTCTCTAAGAGTAGTCGTT
TACCTTTCTGTGTTTCATGTGTAATGTATCTTTCTCTTTATAAATAAATGGAAATGACCC
TTTGCTTCATATTACTTTTTGTATGA