Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g015050.3.1
CDS Infomation	nucleolar protein gar2-like protein (AHRD V3.3 *** AT2G42320.2)
Sequence	ATGGTTCTTGGTCTGAGGTTAAAGCACAAAAAGGGTGCTTCTGTTCAGGTGGAGTATGTT ATTCAGGTAGATGAGATTAAGCCTTGGCCTCCATCACAGTCCCTTAAGTCTGTTCAATCT GTATTGCTTCAATGGGAAAATGATGGTCAGAACTCTGGTTCTGTTGTGTCTACTGTTGGG GATGGTACCATTGAATTCAAGGACTCTTTTACCCTTTCGTTAACTTTGTGTCGCGAAAAG AAGGCACATGACAAGTTCCAGAAGAATTTTTTGGACTTCTATTTATATGAGCTTCGTAAG GATAAGACGACGAGAGGACAACTCTTGGGGACATCAGTAATAAATCTTGCAGATTTTGGA CTGATTGAGGAGGTTGTGTCTATTTACACTCCAGTCAGCTGCAAGAAGAGTTCTAAGAGC TCTGAGCAACCAGCTCTGTTTGTTAGCATACATCCTACTGAGAGGGGTAGCTCAAGTTCA TCACAAATTGGTGTATCCAGAGAAGGGGATGGACAAGAATCCGTTGCAGATTCAGTGAAT GGAAGAAATGAGGATGATGATGAGATTGCATCTTTCACTGATGATGATGAATCGTCACAT TCATCGCAAAATGTTGCTGAGGCTGCAAGGTTTTCACCATCTCAGCAAGGAAAGGTTGCA CATGAATTCATAACTGATAACGTGCTGAGGGACAATCCAGAACGTGATATACTTTTGGGA ATGGACTCTGCAGCAATGCTCATGGATTCTACAAGTAGAAGTTCTAGAAATGTGGCTCCA GGGTTGTCAAGTAGTATATCTTTAAACAGAGAAAATTATGTGAGTAACACCACTTCTTTG TCTAAATTTTCTGAAAGAAGTATGACATCAATACAGAAGAAGTCTGCTTCCCAAGTAGCA GGATCCTCTTCCTCATTACAAAGTTATGGAAATAAAAACGTGAAGGCAAGCACCTCTGTG ACAGCCCTCGAGCAGCAAAGTCTGATGTATGATGTTCAAGAAGATAATGCTGACAAGAAA GGTCTCCCCAAAGACGGTATCAAACTCTCTGCAGAAAATGGACGTGTTCATAGATTTGCA TCCAACACAAGCTATCTCGATGAATCGAATGAGGATAACACTGACCCTGCCGATTCATAT AGCGATCGCTGTCAAGACTTCCGAGATAAACCAAAGGGCCACACGGGAAGTACAATACTC AAAGATTTACATGTTGATATGGTGAACGGAAAAGGGATGGAGCTTCTAGAGATTGATCAG GATGAAGGGAGTTTAAAAGAGATTCCTCATTTTTCAGAAGTCAAATCAGGTAGGAAACAC AGTTTTTTGAAAGGTGATACTCTTAATTCGAATAAGGTACTTGGATTGCAGGGATCAAGC ATCACCAATGGTAAATCAAAGCATGCTAACAGAAGTGGACTTCCTGGTAACAGCCAGAAT CTAGAGAAGTCTGCAAAACAGCATGTTTCGGAAGATGCTCGGTCTAATGGTAAAGGTAAT AAACCAATGAATGGATCTCCTGACAGAAAAAATGAAGGGAAGTCTAGAATAGAGACACTT GAGGAAGAACTAAGGGAAGCGGCAGTTGTCGAGGTTAGCCTTTATTCGGTAGTGGCTGAG CATGGCAGTTCTGCACACAAGGTCCATGCTCCTGCTCGGCGCCTTTCTCGATTTTATGTT CATGCTTGCAGAGCAAAATCCCGAGCTAAACAGGCAGGTGCTGCAAGAGCTGCTGTCTCA GGTTTAGTTTTGGTTTCAAAAGCTTGCGGAAATGATGTTCCGAGGTTAACTTTTTGGTTG TCGAATTCAGTCATGTTGAGAGCAATTGTTAGCCAGGCTGCGGGAGGAAGGAGAGAAGAT GATAGACCATATGCGGAGAGCAATATGGGCAAAACTAGTTTAAATGGAAGATCCTTGAAA AAAGGGAATGAGGTTTCTTTCAATAAAGGTGTCAACGATAGTCTAACAGAAGAACTCAGT GACTGGGAAGATATTGAAACCTTTATGCTTGCACTGGAACAAGTTGAAGCTTGGATTTTC TCCCGCATTGTGGAATCTGTGTGGTGGCAGACTTTGACTCCACACATGCAAAATACAGCT GCAAACTCGGGCGGCAGATCAATGAGCTCAAGTGTTAAGAAAACCTATGGACGCAGGTCT AGTTTAGGGGATCAAGAGCAAGGTAATTTCTCCATTGAGCTCTGGAAGAAGGCTTTCAAA GATGCCTGTGAAAGGCTTTGCCCAGTTAGGGCAGGAGGACATGAGTGTGGCTGCTTGCCA TTGCCGGCTAGATTGGTAATGGAACAGTTGGTGAGTAGATTGGATGTGGCTATGTTCAAT GCAATCCTCCGTGAATCAGCTGAAGAAATGCCAACAGATCCAGTATCAGATCCCATTTTT GATTCTAAGGTCCTCCCAATCCCTGCAGGGAAATCAAGCTTTGGCGCTGGTGCTCAACTA AAAAATGCTATTGGGGACTGGTCTAGATGGCTATCTACTCTCTTTGGAATTGAGGAAAAT GATGCCTCAGGTGATAATGAAGACAAGGCACCAGGTCCCGCCAAGCCTTTCCGTCTGCTC AATGCTCTAAGTGATCTAATGATGCTTCCCTTTGAAATGCTCGCCGATCCTCAAACTAGG AAAGAGGTTTGTCCTATACTTGGTCCTACTTTGATCAGTAGGGTGCTCAGTGGTTTTGTT CCAGATGAATTCTGTCCAACCCCTGTTCCCCCGGAGGTCCTTAGGGCACTGGATTCTGAG GATGCTGAGGATACTCCTGAAGAATCTATCTCGACTGTCCCGTTCACTGCATCACCCACT ACATATTTACCTCCTTCAGTAAGGTCCATTAAAACCTTTCTGGGAGAGACTGGAAACCAA TCCTTTCAAAGAAGCAGTTCATCAGTACTTAAGAAATCATACACCAGTGATGATGAGCTT GATGAATTGGACTCGCCCTTGAGTTCAATCGTAGCTGATAGATTCCGGGGTTCTCCTAAT CTAGCAAAGATCAACTTGATCGCCAAGGGGAGGGGTGATCGGAAAGTTGTTAGATATCAG CTGCTCCGACAAGTGTGGAGAGCTGAAGAACAGTAA

Peptide Sequence

PEP ID	Solyc05g015050.3.1
PEP Infomation	nucleolar protein gar2-like protein (AHRD V3.3 *** AT2G42320.2)
Sequence	MVLGLRLKHKKGASVQVEYVIQVDEIKPWPPSQSLKSVQSVLLQWENDGQNSGSVVSTVG DGTIEFKDSFTLSLTLCREKKAHDKFQKNFLDFYLYELRKDKTTRGQLLGTSVINLADFG LIEEVVSIYTPVSCKKSSKSSEQPALFVSIHPTERGSSSSSQIGVSREGDGQESVADSVN GRNEDDDEIASFTDDDESSHSSQNVAEAARFSPSQQGKVAHEFITDNVLRDNPERDILLG MDSAAMLMDSTSRSSRNVAPGLSSSISLNRENYVSNTTSLSKFSERSMTSIQKKSASQVA GSSSSLQSYGNKNVKASTSVTALEQQSLMYDVQEDNADKKGLPKDGIKLSAENGRVHRFA SNTSYLDESNEDNTDPADSYSDRCQDFRDKPKGHTGSTILKDLHVDMVNGKGMELLEIDQ DEGSLKEIPHFSEVKSGRKHSFLKGDTLNSNKVLGLQGSSITNGKSKHANRSGLPGNSQN LEKSAKQHVSEDARSNGKGNKPMNGSPDRKNEGKSRIETLEEELREAAVVEVSLYSVVAE HGSSAHKVHAPARRLSRFYVHACRAKSRAKQAGAARAAVSGLVLVSKACGNDVPRLTFWL SNSVMLRAIVSQAAGGRREDDRPYAESNMGKTSLNGRSLKKGNEVSFNKGVNDSLTEELS DWEDIETFMLALEQVEAWIFSRIVESVWWQTLTPHMQNTAANSGGRSMSSSVKKTYGRRS SLGDQEQGNFSIELWKKAFKDACERLCPVRAGGHECGCLPLPARLVMEQLVSRLDVAMFN AILRESAEEMPTDPVSDPIFDSKVLPIPAGKSSFGAGAQLKNAIGDWSRWLSTLFGIEEN DASGDNEDKAPGPAKPFRLLNALSDLMMLPFEMLADPQTRKEVCPILGPTLISRVLSGFV PDEFCPTPVPPEVLRALDSEDAEDTPEESISTVPFTASPTTYLPPSVRSIKTFLGETGNQ SFQRSSSSVLKKSYTSDDELDELDSPLSSIVADRFRGSPNLAKINLIAKGRGDRKVVRYQ LLRQVWRAEEQ*

Transcript Sequence

Transcript ID	Solyc05g015050.3.1
Transcript Infomation	nucleolar protein gar2-like protein (AHRD V3.3 *** AT2G42320.2)
Sequence	AAATTAATAATAAGGTTGGAGTTTAGGATGGTGTGGTGTGAAAAGAGGTTGCATGTGAAA AAGAATATAAAATTGTTTTGATTGAAAGTGAGTGAAGTGGACTTGTAAACTTCCAAATCC TCCTTGGCATCTTCTTCATCTTCAAGTTTGTCACAGATCTTTAGCTTTGGGTTTACCTTT TTTCCATTAAAGTTTTCATCTTTACTCTCACTACAAACATACCCACAAAGCTTAAAGTAG CTGACAAGATCTAAAGATTTCATTTTGAGCTGTCTACTGGAAAGTAGCTGATTTGGGAGT TCTGAAACAGATTGTGTTGTATTTCTTGACTTTGAAGTAAGTTTTTTTTGGTGTTACTTC ACTTTCGAATTGATTAAATCTATCCACCAACACCCTTTTGGATTTAAGTTAAAGCAATGG TTCTTGGTCTGAGGTTAAAGCACAAAAAGGGTGCTTCTGTTCAGGTGGAGTATGTTATTC AGGTAGATGAGATTAAGCCTTGGCCTCCATCACAGTCCCTTAAGTCTGTTCAATCTGTAT TGCTTCAATGGGAAAATGATGGTCAGAACTCTGGTTCTGTTGTGTCTACTGTTGGGGATG GTACCATTGAATTCAAGGACTCTTTTACCCTTTCGTTAACTTTGTGTCGCGAAAAGAAGG CACATGACAAGTTCCAGAAGAATTTTTTGGACTTCTATTTATATGAGCTTCGTAAGGATA AGACGACGAGAGGACAACTCTTGGGGACATCAGTAATAAATCTTGCAGATTTTGGACTGA TTGAGGAGGTTGTGTCTATTTACACTCCAGTCAGCTGCAAGAAGAGTTCTAAGAGCTCTG AGCAACCAGCTCTGTTTGTTAGCATACATCCTACTGAGAGGGGTAGCTCAAGTTCATCAC AAATTGGTGTATCCAGAGAAGGGGATGGACAAGAATCCGTTGCAGATTCAGTGAATGGAA GAAATGAGGATGATGATGAGATTGCATCTTTCACTGATGATGATGAATCGTCACATTCAT CGCAAAATGTTGCTGAGGCTGCAAGGTTTTCACCATCTCAGCAAGGAAAGGTTGCACATG AATTCATAACTGATAACGTGCTGAGGGACAATCCAGAACGTGATATACTTTTGGGAATGG ACTCTGCAGCAATGCTCATGGATTCTACAAGTAGAAGTTCTAGAAATGTGGCTCCAGGGT TGTCAAGTAGTATATCTTTAAACAGAGAAAATTATGTGAGTAACACCACTTCTTTGTCTA AATTTTCTGAAAGAAGTATGACATCAATACAGAAGAAGTCTGCTTCCCAAGTAGCAGGAT CCTCTTCCTCATTACAAAGTTATGGAAATAAAAACGTGAAGGCAAGCACCTCTGTGACAG CCCTCGAGCAGCAAAGTCTGATGTATGATGTTCAAGAAGATAATGCTGACAAGAAAGGTC TCCCCAAAGACGGTATCAAACTCTCTGCAGAAAATGGACGTGTTCATAGATTTGCATCCA ACACAAGCTATCTCGATGAATCGAATGAGGATAACACTGACCCTGCCGATTCATATAGCG ATCGCTGTCAAGACTTCCGAGATAAACCAAAGGGCCACACGGGAAGTACAATACTCAAAG ATTTACATGTTGATATGGTGAACGGAAAAGGGATGGAGCTTCTAGAGATTGATCAGGATG AAGGGAGTTTAAAAGAGATTCCTCATTTTTCAGAAGTCAAATCAGGTAGGAAACACAGTT TTTTGAAAGGTGATACTCTTAATTCGAATAAGGTACTTGGATTGCAGGGATCAAGCATCA CCAATGGTAAATCAAAGCATGCTAACAGAAGTGGACTTCCTGGTAACAGCCAGAATCTAG AGAAGTCTGCAAAACAGCATGTTTCGGAAGATGCTCGGTCTAATGGTAAAGGTAATAAAC CAATGAATGGATCTCCTGACAGAAAAAATGAAGGGAAGTCTAGAATAGAGACACTTGAGG AAGAACTAAGGGAAGCGGCAGTTGTCGAGGTTAGCCTTTATTCGGTAGTGGCTGAGCATG GCAGTTCTGCACACAAGGTCCATGCTCCTGCTCGGCGCCTTTCTCGATTTTATGTTCATG CTTGCAGAGCAAAATCCCGAGCTAAACAGGCAGGTGCTGCAAGAGCTGCTGTCTCAGGTT TAGTTTTGGTTTCAAAAGCTTGCGGAAATGATGTTCCGAGGTTAACTTTTTGGTTGTCGA ATTCAGTCATGTTGAGAGCAATTGTTAGCCAGGCTGCGGGAGGAAGGAGAGAAGATGATA GACCATATGCGGAGAGCAATATGGGCAAAACTAGTTTAAATGGAAGATCCTTGAAAAAAG GGAATGAGGTTTCTTTCAATAAAGGTGTCAACGATAGTCTAACAGAAGAACTCAGTGACT GGGAAGATATTGAAACCTTTATGCTTGCACTGGAACAAGTTGAAGCTTGGATTTTCTCCC GCATTGTGGAATCTGTGTGGTGGCAGACTTTGACTCCACACATGCAAAATACAGCTGCAA ACTCGGGCGGCAGATCAATGAGCTCAAGTGTTAAGAAAACCTATGGACGCAGGTCTAGTT TAGGGGATCAAGAGCAAGGTAATTTCTCCATTGAGCTCTGGAAGAAGGCTTTCAAAGATG CCTGTGAAAGGCTTTGCCCAGTTAGGGCAGGAGGACATGAGTGTGGCTGCTTGCCATTGC CGGCTAGATTGGTAATGGAACAGTTGGTGAGTAGATTGGATGTGGCTATGTTCAATGCAA TCCTCCGTGAATCAGCTGAAGAAATGCCAACAGATCCAGTATCAGATCCCATTTTTGATT CTAAGGTCCTCCCAATCCCTGCAGGGAAATCAAGCTTTGGCGCTGGTGCTCAACTAAAAA ATGCTATTGGGGACTGGTCTAGATGGCTATCTACTCTCTTTGGAATTGAGGAAAATGATG CCTCAGGTGATAATGAAGACAAGGCACCAGGTCCCGCCAAGCCTTTCCGTCTGCTCAATG CTCTAAGTGATCTAATGATGCTTCCCTTTGAAATGCTCGCCGATCCTCAAACTAGGAAAG AGGTTTGTCCTATACTTGGTCCTACTTTGATCAGTAGGGTGCTCAGTGGTTTTGTTCCAG ATGAATTCTGTCCAACCCCTGTTCCCCCGGAGGTCCTTAGGGCACTGGATTCTGAGGATG CTGAGGATACTCCTGAAGAATCTATCTCGACTGTCCCGTTCACTGCATCACCCACTACAT ATTTACCTCCTTCAGTAAGGTCCATTAAAACCTTTCTGGGAGAGACTGGAAACCAATCCT TTCAAAGAAGCAGTTCATCAGTACTTAAGAAATCATACACCAGTGATGATGAGCTTGATG AATTGGACTCGCCCTTGAGTTCAATCGTAGCTGATAGATTCCGGGGTTCTCCTAATCTAG CAAAGATCAACTTGATCGCCAAGGGGAGGGGTGATCGGAAAGTTGTTAGATATCAGCTGC TCCGACAAGTGTGGAGAGCTGAAGAACAGTAAAGAACGAACCACGGTGATGTAAATATGT AAAGCGAGGTCCAAAGTTTTGTTGATTTTCTTTCTTTAGTTGCATAATGCACATATATAT ATATATGAACTTCAAGACTATTTCGACATGAAATTTAATGGTCGGGGTCTCATATTTTCC AATAAAATATACTTGTGGTTTCACAAGACTAGGGGGCACATTGATTCAATTCCTAGCAAG TTTTGTCTTGCCAAACTATGACCCAGAGTGCCTTTTGAATTGTCAATTGGGTAGGGTGAC ACAC