Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g014790.3.1
CDS Infomation	Lipoxygenase (AHRD V3.3 *** A0A0V0IV84_SOLCH)
Sequence	ATGTTTACAGCAGTTCAATCAAGATCCACTCCAGTTAGTTCAGAAATCCAACATGTATTC AGCATCAGAAGAAGGAAAATCAGTCAGATTTGTAGATATAATAGGTCTTGTTTTAAAGTT AAAGCTGTGATTCAAAGTGGAAATGATAACAAGACTGTGAAAGATGCAAACTTTATGGAG AAATCTATGGAAGAAAGTAATAGGTTGTTGGTATCTTCTGGTAAAGCGAGAGATGTGAAG GCAGTGGTAACTTTGAGGAAGAAGATGAAGGAGAAGATTAGTGATAAGATTGAAGATCAG TGGGAGTCTTTAATGAATGGGATTGGAAAAGGAATCTTGATTCAGCTTATTAGTCAAGAC ATTGATCCTGTTACCAAGTCGGGAAAGTTTGCGGAGTCTTATGTGAGGGGTTGGTTGTCC AAGCCTTCTGATCATCCACATATAGTTGAATATGCTGCAAATTTGACTGTGCCACACGAT TTTGGACGTCCTGGCGCTATCATTATTACCAATCTCCTTGACAAAGAGATACACTTGGTG CAGATTGTTGTTCATGGTTTTAATGAAGGACCTGTATTCTTTAGTGTTAATACATGGATT CACTCTCAAAAAGATAATCCAGAGAGTAGAATTATCTTCCAAAATCAGGCATATCTACCA TCTCAAACACCACCTGGTATCAAGGATCTTCGACGTGAAGACTTGTTGAGCATTCGTGGC AATGGGAAAGGCGAGAGGAAGCTGCATGAACGAATCTATGATTATGATGTTTATAACGAT TTAGGCAATCCTGACAAAAGTGAGGATCTTGCTAGGCCACTGCTAGGTGGCAAAGAGAAA CCTTATCCCAGGCGCTGTCGGACTGGTAGAGGTCCAACTAAGAAAGATCCACTTGCAGAG AGAAGAATAGAGAAACCTCATCCAGTTTACGTCCCTAGAGATGAAACTTTTGAAGAAATT AAGCAAAATACTTTTTCTGCTGGAAGGTTGAAAGCTCTGTTACATAACCTGGTACCATTA ATTGCGGCTACATTGTCAAGCTCAGACATTCCATTTACAAACTTCACTGACATAGATAAA CTGTATAAGGATGGGGTTGTCTTGAATGATGATAATGATCCACAGAAGAATAATTTTCTT TCTGAAATGTTGGAGAAAGTGTTTTCTGTCAGCAAAAGGTTGCTCAAGTACGAGATTCCT GCTATAATCAGAAGGGATAGATTTGCTTGGTTGCGAGATAATGAGTTTGCGCGACAAGCT TTAGCAGGGGTTAACCCTGTGAACATTGAACTTTTGAGGGAATTTCCAATTGTTAGCAAG CTAGACCCAGCTGTTTATGGTCCCCCTGATTCAGCTATTACACGGGATGTTATAGAACAA GAGCTTAACGGAATGAGTGTTGAAGAGGCTATTCAAGCTAAGAGATTGTTTATACTTGAT TATCATGACATGCTTTTGCCTTTTATTGGGAAGATGAACTCCTTGCCGGGGAGAAAAGCT TATGCATCAAGAACACTTTTCTTCTATACATCCAGAGGTGTTCTAAAGCCAATTATCGTT GAACTTTCACTGCCTCCGACACCTTCTTCAGCTAGGAACAAGCGTATATTCTCCCATGGA CAAGATGCAACCAATCACTGGATATGGAATCTAGCCAAAGCACATGTTTGTTCAAATGAT GCTGGTGTCCATCAGTTGGTGAACCACTGGTTAAGGACTCATGCTTGTATGGAACCATAT ATCATTGCATCCCATAGGCATCTTAGCTCACTGCACCCAATTTATAAGCTACTTCACCCT CATATGCGCTACACGCTGGAAATCAATGCACTTGCAAGGCAGAGTTTGATAAATGGAGGT GGAGTTATTGAAGCATGTTTCAGTCCTGGAAGGTATTCAATGGAAATAAGCTCTGCCGCT TACAAGAGCATGTGGCGGTTTGATATGGAAGCACTGCCTGCAGATTTAATAAGACGGGGA ATGGCTGTGGAGGATACATCGATGCCTTTGGGGGTGAAACTTGTGATTGAAGACTACCCT TATGCAGCAGATGGCCTTCTCATATGGTCTGCAATAAAAGAATATGTGGAGTCCTATGTT GATCATTACTATTCCGAGCCTAATTCTGTCACGTCTGACGTTGAGCTCCAGGGCTGGTGG AATGAGATCAAGAACAAGGGACACGCGGATAAGAAAAACGAGACTTGGTGGCCAAAGCTT GTTACTAAAGAAGACTTGTCTGGCATACTCACCACAATGATCTGGACTGCCTCAGGCCAA CATGCAGCAATAAACTTCGGGCAGTACCCTTTCGGAGGTTATGTACCTAACCGTCCCACC ATTATGCGAAAGCTCATCCCACATGAAGATGATCCCAGCTATGAAAACTTTATTCTTCAC CCCGAGTATACTTTTCTTGCTTCTTTGCCTACTCAACTCCAAGCTACTAAAGTGATGGCT GTTCAAGATACCTTGTCGACTCATTCAGCAGACGAGGAGTACATGTATCAGTTACACGAA ATTCAACAATTCTCCATAAATGATCATGAAGTTTTGAAGATTTTGAAAAGATTCTCAGCC AAATTAAAGGAGATAGAAGATACCATCAACCAACGAAACAAGGATATTCGTCTTAAGAAT CGAAGTGGTGCTGGTGTTCCTCCATATGAACTGCTACTACCTACTTCTGGTCCTGGTGTT ACCTGTCGCGGTATTCCGAACAGCATCTCTATCTGA

Peptide Sequence

PEP ID	Solyc05g014790.3.1
PEP Infomation	Lipoxygenase (AHRD V3.3 *** A0A0V0IV84_SOLCH)
Sequence	MFTAVQSRSTPVSSEIQHVFSIRRRKISQICRYNRSCFKVKAVIQSGNDNKTVKDANFME KSMEESNRLLVSSGKARDVKAVVTLRKKMKEKISDKIEDQWESLMNGIGKGILIQLISQD IDPVTKSGKFAESYVRGWLSKPSDHPHIVEYAANLTVPHDFGRPGAIIITNLLDKEIHLV QIVVHGFNEGPVFFSVNTWIHSQKDNPESRIIFQNQAYLPSQTPPGIKDLRREDLLSIRG NGKGERKLHERIYDYDVYNDLGNPDKSEDLARPLLGGKEKPYPRRCRTGRGPTKKDPLAE RRIEKPHPVYVPRDETFEEIKQNTFSAGRLKALLHNLVPLIAATLSSSDIPFTNFTDIDK LYKDGVVLNDDNDPQKNNFLSEMLEKVFSVSKRLLKYEIPAIIRRDRFAWLRDNEFARQA LAGVNPVNIELLREFPIVSKLDPAVYGPPDSAITRDVIEQELNGMSVEEAIQAKRLFILD YHDMLLPFIGKMNSLPGRKAYASRTLFFYTSRGVLKPIIVELSLPPTPSSARNKRIFSHG QDATNHWIWNLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIASHRHLSSLHPIYKLLHP HMRYTLEINALARQSLINGGGVIEACFSPGRYSMEISSAAYKSMWRFDMEALPADLIRRG MAVEDTSMPLGVKLVIEDYPYAADGLLIWSAIKEYVESYVDHYYSEPNSVTSDVELQGWW NEIKNKGHADKKNETWWPKLVTKEDLSGILTTMIWTASGQHAAINFGQYPFGGYVPNRPT IMRKLIPHEDDPSYENFILHPEYTFLASLPTQLQATKVMAVQDTLSTHSADEEYMYQLHE IQQFSINDHEVLKILKRFSAKLKEIEDTINQRNKDIRLKNRSGAGVPPYELLLPTSGPGV TCRGIPNSISI*

Transcript Sequence

Transcript ID	Solyc05g014790.3.1
Transcript Infomation	Lipoxygenase (AHRD V3.3 *** A0A0V0IV84_SOLCH)
Sequence	AAAGCTAGTAGTAACAGCTTTGTAATAAATTTCAAATGTGACACACCCTTCCCAGTTTCT TCATAAACATAAATAAAAATCCCTTTTGATCAAGTTTTATAGCTAGTTCCGGTAATGTTT ACAGCAGTTCAATCAAGATCCACTCCAGTTAGTTCAGAAATCCAACATGTATTCAGCATC AGAAGAAGGAAAATCAGTCAGATTTGTAGATATAATAGGTCTTGTTTTAAAGTTAAAGCT GTGATTCAAAGTGGAAATGATAACAAGACTGTGAAAGATGCAAACTTTATGGAGAAATCT ATGGAAGAAAGTAATAGGTTGTTGGTATCTTCTGGTAAAGCGAGAGATGTGAAGGCAGTG GTAACTTTGAGGAAGAAGATGAAGGAGAAGATTAGTGATAAGATTGAAGATCAGTGGGAG TCTTTAATGAATGGGATTGGAAAAGGAATCTTGATTCAGCTTATTAGTCAAGACATTGAT CCTGTTACCAAGTCGGGAAAGTTTGCGGAGTCTTATGTGAGGGGTTGGTTGTCCAAGCCT TCTGATCATCCACATATAGTTGAATATGCTGCAAATTTGACTGTGCCACACGATTTTGGA CGTCCTGGCGCTATCATTATTACCAATCTCCTTGACAAAGAGATACACTTGGTGCAGATT GTTGTTCATGGTTTTAATGAAGGACCTGTATTCTTTAGTGTTAATACATGGATTCACTCT CAAAAAGATAATCCAGAGAGTAGAATTATCTTCCAAAATCAGGCATATCTACCATCTCAA ACACCACCTGGTATCAAGGATCTTCGACGTGAAGACTTGTTGAGCATTCGTGGCAATGGG AAAGGCGAGAGGAAGCTGCATGAACGAATCTATGATTATGATGTTTATAACGATTTAGGC AATCCTGACAAAAGTGAGGATCTTGCTAGGCCACTGCTAGGTGGCAAAGAGAAACCTTAT CCCAGGCGCTGTCGGACTGGTAGAGGTCCAACTAAGAAAGATCCACTTGCAGAGAGAAGA ATAGAGAAACCTCATCCAGTTTACGTCCCTAGAGATGAAACTTTTGAAGAAATTAAGCAA AATACTTTTTCTGCTGGAAGGTTGAAAGCTCTGTTACATAACCTGGTACCATTAATTGCG GCTACATTGTCAAGCTCAGACATTCCATTTACAAACTTCACTGACATAGATAAACTGTAT AAGGATGGGGTTGTCTTGAATGATGATAATGATCCACAGAAGAATAATTTTCTTTCTGAA ATGTTGGAGAAAGTGTTTTCTGTCAGCAAAAGGTTGCTCAAGTACGAGATTCCTGCTATA ATCAGAAGGGATAGATTTGCTTGGTTGCGAGATAATGAGTTTGCGCGACAAGCTTTAGCA GGGGTTAACCCTGTGAACATTGAACTTTTGAGGGAATTTCCAATTGTTAGCAAGCTAGAC CCAGCTGTTTATGGTCCCCCTGATTCAGCTATTACACGGGATGTTATAGAACAAGAGCTT AACGGAATGAGTGTTGAAGAGGCTATTCAAGCTAAGAGATTGTTTATACTTGATTATCAT GACATGCTTTTGCCTTTTATTGGGAAGATGAACTCCTTGCCGGGGAGAAAAGCTTATGCA TCAAGAACACTTTTCTTCTATACATCCAGAGGTGTTCTAAAGCCAATTATCGTTGAACTT TCACTGCCTCCGACACCTTCTTCAGCTAGGAACAAGCGTATATTCTCCCATGGACAAGAT GCAACCAATCACTGGATATGGAATCTAGCCAAAGCACATGTTTGTTCAAATGATGCTGGT GTCCATCAGTTGGTGAACCACTGGTTAAGGACTCATGCTTGTATGGAACCATATATCATT GCATCCCATAGGCATCTTAGCTCACTGCACCCAATTTATAAGCTACTTCACCCTCATATG CGCTACACGCTGGAAATCAATGCACTTGCAAGGCAGAGTTTGATAAATGGAGGTGGAGTT ATTGAAGCATGTTTCAGTCCTGGAAGGTATTCAATGGAAATAAGCTCTGCCGCTTACAAG AGCATGTGGCGGTTTGATATGGAAGCACTGCCTGCAGATTTAATAAGACGGGGAATGGCT GTGGAGGATACATCGATGCCTTTGGGGGTGAAACTTGTGATTGAAGACTACCCTTATGCA GCAGATGGCCTTCTCATATGGTCTGCAATAAAAGAATATGTGGAGTCCTATGTTGATCAT TACTATTCCGAGCCTAATTCTGTCACGTCTGACGTTGAGCTCCAGGGCTGGTGGAATGAG ATCAAGAACAAGGGACACGCGGATAAGAAAAACGAGACTTGGTGGCCAAAGCTTGTTACT AAAGAAGACTTGTCTGGCATACTCACCACAATGATCTGGACTGCCTCAGGCCAACATGCA GCAATAAACTTCGGGCAGTACCCTTTCGGAGGTTATGTACCTAACCGTCCCACCATTATG CGAAAGCTCATCCCACATGAAGATGATCCCAGCTATGAAAACTTTATTCTTCACCCCGAG TATACTTTTCTTGCTTCTTTGCCTACTCAACTCCAAGCTACTAAAGTGATGGCTGTTCAA GATACCTTGTCGACTCATTCAGCAGACGAGGAGTACATGTATCAGTTACACGAAATTCAA CAATTCTCCATAAATGATCATGAAGTTTTGAAGATTTTGAAAAGATTCTCAGCCAAATTA AAGGAGATAGAAGATACCATCAACCAACGAAACAAGGATATTCGTCTTAAGAATCGAAGT GGTGCTGGTGTTCCTCCATATGAACTGCTACTACCTACTTCTGGTCCTGGTGTTACCTGT CGCGGTATTCCGAACAGCATCTCTATCTGACATGTTCATGTGTTCACTCTATAATTTATA TCTTCTATGGTTATAACTTTGTGCTATGCAATTTGTAGGTACTATTCCTTCTTTTACAAA TGTTTTACAGGTCTTGCAGAATAATATATTGAGGGTTGTAAGCTGTTGAGAAGCACATTG TAATTAGAAAATAATATTGATCTTCCTTTTTTTTTCATTTTTCATTTAACATTCACAGCT CTGATGAAGAAAAGAGCTAAATGGTATAAACAACATACTTTTTTTGGCAGCATTTAGAAA AACAAACCTCAAAGGTAAAATGCAGAAGACATGTAAAATAGTATCATTGCAACAACTGTA ATTCATACTAGCAAATAGTTTGTGCGTCCTGTTAAATAAAAAAAGATATTTTTCCA