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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g014590.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G57150.1)
Sequence

ATGGAAAACATGGTTGAAGAGAATAACAATTATTTGGAAACAACCATTCTCTTTCAACAA
GATAGCTACTTGGACGAGCCAATTATGTCGTCATACTATGATTCAACCTCGCCAGAAGGG
TCACAATCATCGAAGAACATTGTATCAGAAAGGATTAGGAGGAACAAACTCAAAGAGAAG
TTATTTGCACTTAGAGCTCTTGTTCCAAAAATAACCAAGATGGATAAAGCCTCAATAGTG
AAAGATGCAATTGAATATATTGTAAAACTGCAGAAGCAAGATAGGAGAATTCGAGGAGAG
ATATCAAAGCTTGAATCCGAAACCTCAAACAAGAATAGCACCCATCTTCAACATGAAACC
TTTGATTTTTCAAACCCTAAAACACTTGATGAGCACCAGTATGGATATCATTCTTCCCCT
ATTGATGTTCTTCAGTTGAGGGTATCTTCGATGAGAGATAGGATAGTGGTGGTGAACCTC
ACTTGCATCAAAAGAAAAGATACAATGATAAAACTTTGTGATGTATTCGAATCTTTGAAT
ATCAAAATAATTACTACAAATATTATTGCTTATTCTGAGACACTTCTCAACACAACTTAC
ATTGAGGCTGATGTGGAAGAGAGCAATCTTTTGATGTTGAGGATTCAAAGTGCTATAGCT
TCTCTAAATAATTCAGATAGCCCTCTGAGCTCTTAG

Peptide Sequence

PEP ID

Solyc05g014590.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G57150.1)
Sequence

MENMVEENNNYLETTILFQQDSYLDEPIMSSYYDSTSPEGSQSSKNIVSERIRRNKLKEK
LFALRALVPKITKMDKASIVKDAIEYIVKLQKQDRRIRGEISKLESETSNKNSTHLQHET
FDFSNPKTLDEHQYGYHSSPIDVLQLRVSSMRDRIVVVNLTCIKRKDTMIKLCDVFESLN
IKIITTNIIAYSETLLNTTYIEADVEESNLLMLRIQSAIASLNNSDSPLSS*

Transcript Sequence

Transcript ID

Solyc05g014590.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G57150.1)
Sequence

TTACTATTTCTTAATTCATGTTTAAAGTTAACGTTTGAACAACTATTATTTGTAAGAAGA
AGTAGTTTTCTGATCTATATATACCCTTTTCTTATTCTCTCAACTTGTCCATCTCTTTTC
AAAGAAGATGGAAAACATGGTTGAAGAGAATAACAATTATTTGGAAACAACCATTCTCTT
TCAACAAGATAGCTACTTGGACGAGCCAATTATGTCGTCATACTATGATTCAACCTCGCC
AGAAGGGTCACAATCATCGAAGAACATTGTATCAGAAAGGATTAGGAGGAACAAACTCAA
AGAGAAGTTATTTGCACTTAGAGCTCTTGTTCCAAAAATAACCAAGATGGATAAAGCCTC
AATAGTGAAAGATGCAATTGAATATATTGTAAAACTGCAGAAGCAAGATAGGAGAATTCG
AGGAGAGATATCAAAGCTTGAATCCGAAACCTCAAACAAGAATAGCACCCATCTTCAACA
TGAAACCTTTGATTTTTCAAACCCTAAAACACTTGATGAGCACCAGTATGGATATCATTC
TTCCCCTATTGATGTTCTTCAGTTGAGGGTATCTTCGATGAGAGATAGGATAGTGGTGGT
GAACCTCACTTGCATCAAAAGAAAAGATACAATGATAAAACTTTGTGATGTATTCGAATC
TTTGAATATCAAAATAATTACTACAAATATTATTGCTTATTCTGAGACACTTCTCAACAC
AACTTACATTGAGGCTGATGTGGAAGAGAGCAATCTTTTGATGTTGAGGATTCAAAGTGC
TATAGCTTCTCTAAATAATTCAGATAGCCCTCTGAGCTCTTAGAAAAACAATCACTTTGA
TTCAACTATGATTCTCCTTCATAATATAATAATGATGTATTTGTTCCAAGAGTGTTTTTT
TTTCCTGGTTGATCTTAAAGTTTGGTCACCTTTGAATAACTATTAATTTATGTTTTTCAC
ATGAAATCTCATTCAATGAAAGTCTACTGTTATAGTCCATTT