Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g014540.3.1
CDS Infomation	DNA polymerase alpha subunit B (AHRD V3.3 *** K4BYH3_SOLLC)
Sequence	ATGGAAGAGGAAATCAAAGCTGAATTCCTGAAAAATGGCTTTAGTTTCGATGATGAAACA GAAATTCTCAACAAATGTCTTACTTTCTGTATTCAATACAGCCTAAGCCCCTCCGATCTT GTTTCTAGCTGGGATGTCTACTCTCTCAATAGGGGTCTGCAATTGACGGTGCAGAGTTCA CATATGGGTGCGTTTCTACAACAATTACAGAATGAGCGGAGAGAGGACATTGTTAAAAAG GAACCTGGTTTACATTTCTACTCCAGTGATATTTCGATGATGTTGAATGATGAATACGAG AACACAAAGGACATAATTCTTGGTACTCCAACAGATAAACGGAAGACATCACAGACAGAA ACAATTGTTTCAGCACGAAAAACTAATGGGAGCATTTCCACTTCCAGAAAGCATTTAGAA ACAATCACACCCTTTGGACAAAGAAAGAACAAGTTTGTGGTGCAGTTTACTCTCAATGAG AACGCTAATGGAGAAAGTATGAAAATAGAAAACGATGAGGAGAACCCCAGTGATGACATT ATAAAGAGAGTCCAACCAATCAAAAGATGTTCTTTGCAGATCATTAGCTCTAAACCTGAG CCAGGGTGCAGGTTCATGTATGACAGGACAGAAAATAAGTTTAATTTTCTTGAAAGCCGA ATAAAAGATCACACAACAGCTCTAGTAGCCTCTGGACTGCACGAGGAACCAACTGATCCT ACAGTTGCTTCACAGAGATCCGTATTTGCTGTTGGTATGATTTGTTGTGAGGAAGAAGGG CGTTTGAAGGAAAAGCCTATTTTACTGCAAAGCAGCGTTGAGTATTCTGGAGGTCAACGT GTGCGCCTTGACTTGCAAAACTTGGACCACTTCTCTGTTTTCCCTGGCCAGGTGGTTGGT GTTGAAGGGCATAACCCAAGCGGCCATTGTCTTATTGCATCAAAGATTGTTGACCACATT CCTTTGTCAGCCTCTTCCACGGAAAATCTCCCACCTACAAAGAAACAAGCAATGGATCAA TATCTTCAGTCAGCCAATGCCGTGGCTGCTATGCCAGAGCTATCATTGATTATAGCTGCG GGTCCTTTTACAACCGTTGATAATTTATTCTTTGAACCTCTTGCTGAGCTTCTGTCATAC GCGCGGCGCAAGCAGCCTCAGTTGATCATACTGCTAGGACCATTTATAGATTCGGATCAT CCCGAGATCAAGAAAGGAACTGTAGATAGGACATTTGATGAAATCTTTCAGGATGAAATT CTTGCAAGGTTGAGAGATTATGTAGAATATATGGGTTCTGCTGCTCGTGTGGTTCTTGTT CCATCTGTACGAGATGCTAGCCATGACTTCGTTTACCCTCAGCCAGCCTTCGACATTCAG TTGCCTGATCTTGAGCATCAGATAAATAGCATTACAAATCCTGGAATATTCTGTGCAAAT GAGGTGAAAGTGGCTTGCTGTACGGTTGATGTTCTTAAACAGCTGAGTGCAGAGGAAATT TCACGAAATCCACAAGGGGGATCCAAGCAACGGATGACAACTCTTGCGAACCATATCTTA AACCAGCGCAGCTTCTATCCTCTATATCCACCAGCTGAAGGCGTACCCATTGATTTCTCT CTAGCTCCAGAAGCTCTTCAGATGTCAACAGACCCAGATATACTTATTTTACCCTCAGAT TTGGCTCACTTTGTTAGGGTGGTCTCCCTTGGTGAAAGAAGTGAAGGAGAAGAAGTGAAG TGCATATGTGTGAATCCTGGACGACTTTCAAGGGGAGAAGGAGGAGGTTTCTTCGTGGAG CTTAACTATCATGGAAGCTGTGATTCATCAAGTGCTTCAGTCCTTCGTATATAA

Peptide Sequence

PEP ID	Solyc05g014540.3.1
PEP Infomation	DNA polymerase alpha subunit B (AHRD V3.3 *** K4BYH3_SOLLC)
Sequence	MEEEIKAEFLKNGFSFDDETEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQLTVQSS HMGAFLQQLQNERREDIVKKEPGLHFYSSDISMMLNDEYENTKDIILGTPTDKRKTSQTE TIVSARKTNGSISTSRKHLETITPFGQRKNKFVVQFTLNENANGESMKIENDEENPSDDI IKRVQPIKRCSLQIISSKPEPGCRFMYDRTENKFNFLESRIKDHTTALVASGLHEEPTDP TVASQRSVFAVGMICCEEEGRLKEKPILLQSSVEYSGGQRVRLDLQNLDHFSVFPGQVVG VEGHNPSGHCLIASKIVDHIPLSASSTENLPPTKKQAMDQYLQSANAVAAMPELSLIIAA GPFTTVDNLFFEPLAELLSYARRKQPQLIILLGPFIDSDHPEIKKGTVDRTFDEIFQDEI LARLRDYVEYMGSAARVVLVPSVRDASHDFVYPQPAFDIQLPDLEHQINSITNPGIFCAN EVKVACCTVDVLKQLSAEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFS LAPEALQMSTDPDILILPSDLAHFVRVVSLGERSEGEEVKCICVNPGRLSRGEGGGFFVE LNYHGSCDSSSASVLRI*

Transcript Sequence

Transcript ID	Solyc05g014540.3.1
Transcript Infomation	DNA polymerase alpha subunit B (AHRD V3.3 *** K4BYH3_SOLLC)
Sequence	TATATAATAGCCATATGAACTCAGGGTAAAAATATTTATTTTTCACTATAAATTCGAATA TAAATCTTCAAAATTGTTATGAATTTTTCATGAACAATACAATAAAAATAAAATAGTTAA TCATTTGTAATATTTAAAATTTATAATAAAAATAGTATTTAGTTTATCAAATAATACTTC TTTATCTACAAAACAAAATGAGAAATATATTACAAAACTACATCTATACTTTTATATTTC TAAAATTATTTAGGAAATTTGTGACTATAAATTATAAGAAACGGTAGAAGTGGAGGGAAT ATTTTCCCGCCATTTTCCTCTCAGCTAAATTTGTTCTCTTCTCCAACAGACCCCCCCCTC CAAAAAAAACCTAACCCTAGGCTCGCGACCGCCATGGAAGAGGAAATCAAAGCTGAATTC CTGAAAAATGGCTTTAGTTTCGATGATGAAACAGAAATTCTCAACAAATGTCTTACTTTC TGTATTCAATACAGCCTAAGCCCCTCCGATCTTGTTTCTAGCTGGGATGTCTACTCTCTC AATAGGGGTCTGCAATTGACGGTGCAGAGTTCACATATGGGTGCGTTTCTACAACAATTA CAGAATGAGCGGAGAGAGGACATTGTTAAAAAGGAACCTGGTTTACATTTCTACTCCAGT GATATTTCGATGATGTTGAATGATGAATACGAGAACACAAAGGACATAATTCTTGGTACT CCAACAGATAAACGGAAGACATCACAGACAGAAACAATTGTTTCAGCACGAAAAACTAAT GGGAGCATTTCCACTTCCAGAAAGCATTTAGAAACAATCACACCCTTTGGACAAAGAAAG AACAAGTTTGTGGTGCAGTTTACTCTCAATGAGAACGCTAATGGAGAAAGTATGAAAATA GAAAACGATGAGGAGAACCCCAGTGATGACATTATAAAGAGAGTCCAACCAATCAAAAGA TGTTCTTTGCAGATCATTAGCTCTAAACCTGAGCCAGGGTGCAGGTTCATGTATGACAGG ACAGAAAATAAGTTTAATTTTCTTGAAAGCCGAATAAAAGATCACACAACAGCTCTAGTA GCCTCTGGACTGCACGAGGAACCAACTGATCCTACAGTTGCTTCACAGAGATCCGTATTT GCTGTTGGTATGATTTGTTGTGAGGAAGAAGGGCGTTTGAAGGAAAAGCCTATTTTACTG CAAAGCAGCGTTGAGTATTCTGGAGGTCAACGTGTGCGCCTTGACTTGCAAAACTTGGAC CACTTCTCTGTTTTCCCTGGCCAGGTGGTTGGTGTTGAAGGGCATAACCCAAGCGGCCAT TGTCTTATTGCATCAAAGATTGTTGACCACATTCCTTTGTCAGCCTCTTCCACGGAAAAT CTCCCACCTACAAAGAAACAAGCAATGGATCAATATCTTCAGTCAGCCAATGCCGTGGCT GCTATGCCAGAGCTATCATTGATTATAGCTGCGGGTCCTTTTACAACCGTTGATAATTTA TTCTTTGAACCTCTTGCTGAGCTTCTGTCATACGCGCGGCGCAAGCAGCCTCAGTTGATC ATACTGCTAGGACCATTTATAGATTCGGATCATCCCGAGATCAAGAAAGGAACTGTAGAT AGGACATTTGATGAAATCTTTCAGGATGAAATTCTTGCAAGGTTGAGAGATTATGTAGAA TATATGGGTTCTGCTGCTCGTGTGGTTCTTGTTCCATCTGTACGAGATGCTAGCCATGAC TTCGTTTACCCTCAGCCAGCCTTCGACATTCAGTTGCCTGATCTTGAGCATCAGATAAAT AGCATTACAAATCCTGGAATATTCTGTGCAAATGAGGTGAAAGTGGCTTGCTGTACGGTT GATGTTCTTAAACAGCTGAGTGCAGAGGAAATTTCACGAAATCCACAAGGGGGATCCAAG CAACGGATGACAACTCTTGCGAACCATATCTTAAACCAGCGCAGCTTCTATCCTCTATAT CCACCAGCTGAAGGCGTACCCATTGATTTCTCTCTAGCTCCAGAAGCTCTTCAGATGTCA ACAGACCCAGATATACTTATTTTACCCTCAGATTTGGCTCACTTTGTTAGGGTGGTCTCC CTTGGTGAAAGAAGTGAAGGAGAAGAAGTGAAGTGCATATGTGTGAATCCTGGACGACTT TCAAGGGGAGAAGGAGGAGGTTTCTTCGTGGAGCTTAACTATCATGGAAGCTGTGATTCA TCAAGTGCTTCAGTCCTTCGTATATAACATCGAGACACACACTAATCTTCCTGCAGTTAT GTTTTTAGCAGTAGCAAAGATTGTGGAAATCCATGAGCTGAGTCACAGCAACGACTATGA AGAACTGGGGCAGACGGCTTGTCATGGAAACAAGTAACTAGCATTCGATTCCCTTGGTAG TTTTACACTTCCCCTAGTTTCTTATGTTAATATTAAGGAAGTTATTGTTCTGTCGAGCCG GTTATAGCATCCTAGGACCTTTCTGAGGTCAAATGTAGGAGGTTTATTTATACGCGATAA GTTGTATTGCCTTTGTCCATAGGAAGTAGAAAATGCAACATAGAAACTACTGTGACTGTG TGTTAGTTCTTGGGAGATCCTTTTCTATATGATGAAATACAATATTGCAAGGGTAAAGGG TTGTCAAGTGTCCCTTTAAATTTTTCTTAGACTTGAGTTTGCAAGAGTAGTTGTTCAGTT TTTGGGAGGTGTTATATATTGAAATATGTGAAAAATTGATTACAAAGAAGTTTTAAGATT T