Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g013880.1.1
CDS Infomation	Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061E701_THECC)
Sequence	ATGAAATTCCGATCATGGATTTCACCTTTTTCCTCCGCTAACGCCGCCGCCGACCACCCT ATTCCGCCGCCAAAAGGGATGTTTCCCGATGATGCAAGTAACTTCTCCGATTTACCCAGT AGTACTGCTTCACCGTCATTAGTTTCTCAAGAAACAAATTCTCTCAGCAGTTTACAGAGC AATCTCTCACTTTTAACTTTACCTTCTGTTCCTTCTCTGCAAAATCTCTCCCCTGCAACT TTAAACCTCGCTATCTCCGCTCGTTGCGTAAATTCTCTAAATCCCAGAAATGCCCATGTC ACTTTCCTTGCTATGCATAACAATCTGTTATATGCAGCTTCCTCAAATGAAATCAACGTT TTCGAACTCATAAATTTCACACTTATCGATACTTTCAATAACAAAGACCCATCTTCTGGT TCTGCAAAATCTGTTAGTTTCCTCGACGGTAAAATCTTCACTGCGCATCAGGATTGTAAA ATCCGGGTGTGGAAGTTGACACCCAATAAGCAGCATAAACTAATAGCAACCCTCCCGACG CTTGAGGATCGATTACGCCGGTTTGTGTTTCCGAGTAGTTATACAAATGTGAGAAGACAT AAGAAAAAAATGTGGATCGAACATCATGATGCTGTTTCTGGGTTAGCTGTGAATGAGAAT TTGATGTGCTCTGTTTCGTGGGATCGGTGTTTGAAAATCTGGGGAGGTTCGAAATTACGG TGTATTGAATCGATTAAAGCTCATGATGATGCGATTAACGCTGTTGTCGTAGGGAAGGAC GGAACAATTTTTACAGGTTCGGCTGATAAACGGATTCGGGTTTGGGGGAAACCGTATGCG GAGAAGAAAGGTAAAATTGGATTAATTGCGACGTTGGAGAAGCATAAATCGGCGGTGAAT GCATTAGCGTTAAGCTCCGATGAGTCTGTGTTATTTTCTGGCGCCTGTGACCGGTCGATT TTAGTGTGGGAAAGAGAAGACAGTGCGAATTATATGGTGGTTACTGGTGCATTGAGAGGT CATACGAAGGCGATACTGTGTCTGATCAACGTTTCTGATTTGTTGTTTAGTGGATCGGCG GATCGAACGGTGAGGATTTGGACACGTGGGAATCAGGGACAGTTCTGTTGTTTAACGGTA CTTGATGGACATCGAACACCGGTGAGGTCATTGGTGGCGACGCCGGCGGAAAGCGGTGGT GTTAAGTTGTTTAGTGGAAGCTTTGACGGAGAAATTAAAGAGTGGCAAATTGTGGTTTCT AGTTCAAGTGGAAGTTGA

Peptide Sequence

PEP ID	Solyc05g013880.1.1
PEP Infomation	Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061E701_THECC)
Sequence	MKFRSWISPFSSANAAADHPIPPPKGMFPDDASNFSDLPSSTASPSLVSQETNSLSSLQS NLSLLTLPSVPSLQNLSPATLNLAISARCVNSLNPRNAHVTFLAMHNNLLYAASSNEINV FELINFTLIDTFNNKDPSSGSAKSVSFLDGKIFTAHQDCKIRVWKLTPNKQHKLIATLPT LEDRLRRFVFPSSYTNVRRHKKKMWIEHHDAVSGLAVNENLMCSVSWDRCLKIWGGSKLR CIESIKAHDDAINAVVVGKDGTIFTGSADKRIRVWGKPYAEKKGKIGLIATLEKHKSAVN ALALSSDESVLFSGACDRSILVWEREDSANYMVVTGALRGHTKAILCLINVSDLLFSGSA DRTVRIWTRGNQGQFCCLTVLDGHRTPVRSLVATPAESGGVKLFSGSFDGEIKEWQIVVS SSSGS*

Transcript Sequence

Transcript ID	Solyc05g013880.1.1
Transcript Infomation	Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061E701_THECC)
Sequence	ATGAAATTCCGATCATGGATTTCACCTTTTTCCTCCGCTAACGCCGCCGCCGACCACCCT ATTCCGCCGCCAAAAGGGATGTTTCCCGATGATGCAAGTAACTTCTCCGATTTACCCAGT AGTACTGCTTCACCGTCATTAGTTTCTCAAGAAACAAATTCTCTCAGCAGTTTACAGAGC AATCTCTCACTTTTAACTTTACCTTCTGTTCCTTCTCTGCAAAATCTCTCCCCTGCAACT TTAAACCTCGCTATCTCCGCTCGTTGCGTAAATTCTCTAAATCCCAGAAATGCCCATGTC ACTTTCCTTGCTATGCATAACAATCTGTTATATGCAGCTTCCTCAAATGAAATCAACGTT TTCGAACTCATAAATTTCACACTTATCGATACTTTCAATAACAAAGACCCATCTTCTGGT TCTGCAAAATCTGTTAGTTTCCTCGACGGTAAAATCTTCACTGCGCATCAGGATTGTAAA ATCCGGGTGTGGAAGTTGACACCCAATAAGCAGCATAAACTAATAGCAACCCTCCCGACG CTTGAGGATCGATTACGCCGGTTTGTGTTTCCGAGTAGTTATACAAATGTGAGAAGACAT AAGAAAAAAATGTGGATCGAACATCATGATGCTGTTTCTGGGTTAGCTGTGAATGAGAAT TTGATGTGCTCTGTTTCGTGGGATCGGTGTTTGAAAATCTGGGGAGGTTCGAAATTACGG TGTATTGAATCGATTAAAGCTCATGATGATGCGATTAACGCTGTTGTCGTAGGGAAGGAC GGAACAATTTTTACAGGTTCGGCTGATAAACGGATTCGGGTTTGGGGGAAACCGTATGCG GAGAAGAAAGGTAAAATTGGATTAATTGCGACGTTGGAGAAGCATAAATCGGCGGTGAAT GCATTAGCGTTAAGCTCCGATGAGTCTGTGTTATTTTCTGGCGCCTGTGACCGGTCGATT TTAGTGTGGGAAAGAGAAGACAGTGCGAATTATATGGTGGTTACTGGTGCATTGAGAGGT CATACGAAGGCGATACTGTGTCTGATCAACGTTTCTGATTTGTTGTTTAGTGGATCGGCG GATCGAACGGTGAGGATTTGGACACGTGGGAATCAGGGACAGTTCTGTTGTTTAACGGTA CTTGATGGACATCGAACACCGGTGAGGTCATTGGTGGCGACGCCGGCGGAAAGCGGTGGT GTTAAGTTGTTTAGTGGAAGCTTTGACGGAGAAATTAAAGAGTGGCAAATTGTGGTTTCT AGTTCAAGTGGAAGTTGA