Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g013870.3.1
CDS Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

ATGACAAGTGTTAACCCATTGAATGAAAAGGTATCCATGAATAACCCAATGAATAATATG
CCAAATGGATCTGCTGCCAATATGATGCAACCAATGAGTAATCCAACTACAGGCCATCAC
ATCAACCCTTTGAATGTCCAAATCAATCCTCATTCTGTTGTCAACCCAGTGAGTCGTGAC
ATGATACCAGCTAGTGTTGTACCTGCTGCTCATCATACAGCTCCGATCAATCCACGAACA
TCAAATCTAGCAGCTAGGCTTCCACACAGGAGAGGAGATCATCATATGTTTTTGACATCT
GATGATAATGCAATGATGAAGCACATTGAAGAAACTCATATCCCAGATGGCCGTGACTTT
GATGTCAAGCCTCTTGTTCATATTATTGAGGATATTGTGCATCGCGCTACTCCCATTGCT
GGACATGTTCATGAAGCTAAAGTTCAAGCACATCTGGAAGCATTGGAAGAGAAGGCTCCC
CACAATGAACTTATTGAAATACTCAACTATTTGGCATATCCTATACAAAGGATTAAAATG
GAGTTGATAAGCAAATGTGCTAACAAAGAAGACGCTCATTCGACAACAATGTCACTGCTT
CACTCACTCACAACCTATGCCTGGGACACGAAAGTAGCAATAACTTTCGCGGCTTTTGCC
CAGCTATATGGTGAATTTGGTCTGCTTACTCATCAATATACTACAAATCCTCTGGCTAAG
TCTGTTGCAATCATCATGGAACTTCCAGAAATAATGACACGTCAGGATATTCTCAAGCAG
AAATTTGATGCAATCCATGATCTGATCGACAAAATGCTGGATGTAACAAAGTGTATCATC
GAGTTTAGAGACGTTCAATCGTCTCAAAATCAACATGTTATCACACAAGAATTGGAAATG
TTGATCAATACTGCCCATATTTCCACTGCTGCTTACTGGACTATGAGGGCTGCTGTCATG
TGTGCTGCTATGATTTTGAATCTCATTGCCATTGGCCACGAGCAAATTTCTTCAACATCT
GAGGCTTGGGAGATATCTAGTTTGGCTCACAAGCTTGCAAACATATTGGATCATCTCAAA
AAGGTTCTTAACCTTTGTCACCAAAAGATTGAGGAGAAGAGGCAATATGATAAATTCGAA
GCAATTCTACGACTTCTCAGGACACCTCAACTTGATAACATGAAGATACTCTCCATGTTG
ATCCACTCCAGGGATGATCAGCTTCCACTTTTTGATGGAACTCATAAGAGAAGGGTAAGT
CTTGATGTGCTAAGAAGGAAGCATGTTTTACTTTTGATCTCCGACTTAGACATTGCACCC
GAAGAGCTCTTTGTTCTCCACCACATGTACGAAGAATCCAAGGCACAACCAAACAGGCCA
GAGAGCAACTATGAGGTTGTATGGATCCCTGTGGTTGACAAGAGGCTAACACCATGGACT
GATGCAAAACAAGTGAAATTTGAAGAAGTACAAGCTTCAATGCCATGGTATACAGTGGCA
CATCCATCGATGATCGATCCAGCAGTGTTAAGGTGCATTAAAGAGGTGTGGGGATTCAAG
AAGAAGCCTCAGCTTGTTGTTCTTGATCCACAAGGCAAAGAATCGAACAATAATGCTTAC
CATATATTATGGATTTGGGGAAGTTTGGCTTTTCCATTTACCAAAGCTAGGGAAACAGCT
TTGTGGAAGGAACAAACTTGGAATGTTGAACTGTTAGCTGATTCCATTGATCAAAATGTT
TTCACTTGGATAAGTGAAGGCAAATGCATATGCTTGTACGGAGGAGAAGATATTGAATGG
ATCAGATCATTCACCTCATCAACGCGAGCTGTCGCAAATGCAGCTGGCGTTCCACTAGAG
ATGCTCTACGTGGGAAAAAAGAACCCAAAAGAAAGAGTCCGGAAGAACAGCTCAATAATC
CAAATGGAAAACTTGAGCCATGTGGTGCAAGACCAAACTCTAATTTGGTTCTTTTGGGAA
AGGCTAGAAAGCATGTGGCACTCTAGGACTCAACAAGACATCCCCGGTGAAACTGACCCG
ATCCTTCAGGAGATTGTGACGATTTTGAGCTATGATGGAAGTGATCTTGGATGGGCTGTG
TTCAGCCGCGGATTGGCTGAGATGACTAGAGGTAAAGGTGATCTGATAGTGCAAGTTATG
AAGGGATTTGATCGTTGGAGAAATGAAGTGAGTGATATAACTACATTTGTTCCTGCATTG
GACCGTCAACTTCGTGATCTTCATAGTCCACATCATTGTACTCGACTAATTCTACCGAGT
ACCTCTGGACATATTCCTGAGAGAGTGGTTTGTGCTGAATGTAGTCGTCCCATGGAGAAG
TTTATCATGTACCGCTGTTGCACTGATTGA

Peptide Sequence

PEP ID

Solyc05g013870.3.1
PEP Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

MTSVNPLNEKVSMNNPMNNMPNGSAANMMQPMSNPTTGHHINPLNVQINPHSVVNPVSRD
MIPASVVPAAHHTAPINPRTSNLAARLPHRRGDHHMFLTSDDNAMMKHIEETHIPDGRDF
DVKPLVHIIEDIVHRATPIAGHVHEAKVQAHLEALEEKAPHNELIEILNYLAYPIQRIKM
ELISKCANKEDAHSTTMSLLHSLTTYAWDTKVAITFAAFAQLYGEFGLLTHQYTTNPLAK
SVAIIMELPEIMTRQDILKQKFDAIHDLIDKMLDVTKCIIEFRDVQSSQNQHVITQELEM
LINTAHISTAAYWTMRAAVMCAAMILNLIAIGHEQISSTSEAWEISSLAHKLANILDHLK
KVLNLCHQKIEEKRQYDKFEAILRLLRTPQLDNMKILSMLIHSRDDQLPLFDGTHKRRVS
LDVLRRKHVLLLISDLDIAPEELFVLHHMYEESKAQPNRPESNYEVVWIPVVDKRLTPWT
DAKQVKFEEVQASMPWYTVAHPSMIDPAVLRCIKEVWGFKKKPQLVVLDPQGKESNNNAY
HILWIWGSLAFPFTKARETALWKEQTWNVELLADSIDQNVFTWISEGKCICLYGGEDIEW
IRSFTSSTRAVANAAGVPLEMLYVGKKNPKERVRKNSSIIQMENLSHVVQDQTLIWFFWE
RLESMWHSRTQQDIPGETDPILQEIVTILSYDGSDLGWAVFSRGLAEMTRGKGDLIVQVM
KGFDRWRNEVSDITTFVPALDRQLRDLHSPHHCTRLILPSTSGHIPERVVCAECSRPMEK
FIMYRCCTD*

Transcript Sequence

Transcript ID

Solyc05g013870.3.1
Transcript Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

AACACACAACAATATTTAACTACACTTGCCTTTCTAAAAACCCTTTAGTGTTCTTTTTCC
ATCCATATAAATGACAAGTGTTAACCCATTGAATGAAAAGGTATCCATGAATAACCCAAT
GAATAATATGCCAAATGGATCTGCTGCCAATATGATGCAACCAATGAGTAATCCAACTAC
AGGCCATCACATCAACCCTTTGAATGTCCAAATCAATCCTCATTCTGTTGTCAACCCAGT
GAGTCGTGACATGATACCAGCTAGTGTTGTACCTGCTGCTCATCATACAGCTCCGATCAA
TCCACGAACATCAAATCTAGCAGCTAGGCTTCCACACAGGAGAGGAGATCATCATATGTT
TTTGACATCTGATGATAATGCAATGATGAAGCACATTGAAGAAACTCATATCCCAGATGG
CCGTGACTTTGATGTCAAGCCTCTTGTTCATATTATTGAGGATATTGTGCATCGCGCTAC
TCCCATTGCTGGACATGTTCATGAAGCTAAAGTTCAAGCACATCTGGAAGCATTGGAAGA
GAAGGCTCCCCACAATGAACTTATTGAAATACTCAACTATTTGGCATATCCTATACAAAG
GATTAAAATGGAGTTGATAAGCAAATGTGCTAACAAAGAAGACGCTCATTCGACAACAAT
GTCACTGCTTCACTCACTCACAACCTATGCCTGGGACACGAAAGTAGCAATAACTTTCGC
GGCTTTTGCCCAGCTATATGGTGAATTTGGTCTGCTTACTCATCAATATACTACAAATCC
TCTGGCTAAGTCTGTTGCAATCATCATGGAACTTCCAGAAATAATGACACGTCAGGATAT
TCTCAAGCAGAAATTTGATGCAATCCATGATCTGATCGACAAAATGCTGGATGTAACAAA
GTGTATCATCGAGTTTAGAGACGTTCAATCGTCTCAAAATCAACATGTTATCACACAAGA
ATTGGAAATGTTGATCAATACTGCCCATATTTCCACTGCTGCTTACTGGACTATGAGGGC
TGCTGTCATGTGTGCTGCTATGATTTTGAATCTCATTGCCATTGGCCACGAGCAAATTTC
TTCAACATCTGAGGCTTGGGAGATATCTAGTTTGGCTCACAAGCTTGCAAACATATTGGA
TCATCTCAAAAAGGTTCTTAACCTTTGTCACCAAAAGATTGAGGAGAAGAGGCAATATGA
TAAATTCGAAGCAATTCTACGACTTCTCAGGACACCTCAACTTGATAACATGAAGATACT
CTCCATGTTGATCCACTCCAGGGATGATCAGCTTCCACTTTTTGATGGAACTCATAAGAG
AAGGGTAAGTCTTGATGTGCTAAGAAGGAAGCATGTTTTACTTTTGATCTCCGACTTAGA
CATTGCACCCGAAGAGCTCTTTGTTCTCCACCACATGTACGAAGAATCCAAGGCACAACC
AAACAGGCCAGAGAGCAACTATGAGGTTGTATGGATCCCTGTGGTTGACAAGAGGCTAAC
ACCATGGACTGATGCAAAACAAGTGAAATTTGAAGAAGTACAAGCTTCAATGCCATGGTA
TACAGTGGCACATCCATCGATGATCGATCCAGCAGTGTTAAGGTGCATTAAAGAGGTGTG
GGGATTCAAGAAGAAGCCTCAGCTTGTTGTTCTTGATCCACAAGGCAAAGAATCGAACAA
TAATGCTTACCATATATTATGGATTTGGGGAAGTTTGGCTTTTCCATTTACCAAAGCTAG
GGAAACAGCTTTGTGGAAGGAACAAACTTGGAATGTTGAACTGTTAGCTGATTCCATTGA
TCAAAATGTTTTCACTTGGATAAGTGAAGGCAAATGCATATGCTTGTACGGAGGAGAAGA
TATTGAATGGATCAGATCATTCACCTCATCAACGCGAGCTGTCGCAAATGCAGCTGGCGT
TCCACTAGAGATGCTCTACGTGGGAAAAAAGAACCCAAAAGAAAGAGTCCGGAAGAACAG
CTCAATAATCCAAATGGAAAACTTGAGCCATGTGGTGCAAGACCAAACTCTAATTTGGTT
CTTTTGGGAAAGGCTAGAAAGCATGTGGCACTCTAGGACTCAACAAGACATCCCCGGTGA
AACTGACCCGATCCTTCAGGAGATTGTGACGATTTTGAGCTATGATGGAAGTGATCTTGG
ATGGGCTGTGTTCAGCCGCGGATTGGCTGAGATGACTAGAGGTAAAGGTGATCTGATAGT
GCAAGTTATGAAGGGATTTGATCGTTGGAGAAATGAAGTGAGTGATATAACTACATTTGT
TCCTGCATTGGACCGTCAACTTCGTGATCTTCATAGTCCACATCATTGTACTCGACTAAT
TCTACCGAGTACCTCTGGACATATTCCTGAGAGAGTGGTTTGTGCTGAATGTAGTCGTCC
CATGGAGAAGTTTATCATGTACCGCTGTTGCACTGATTGAGGAGTTATGAGGAGTTGGGT
CGCGTCTAGAGGACTACTATATATTTGAATAAAATGACCTCTCTTGTGAGTTTTTTTAAG
TATTGGTTGTGCTTACTTTAATTAATGTTTAGATTTTCATGTACTTGTTTTTGAGATTTC
AGTGTGTGATGTATTAATGAAGAATCAATAAACAGCTTTTCCAATTATATA