Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g013850.2.1
CDS Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

ATGACAAGTATTAACCCATTGAATGAAAAAGTATCCATGAACAACCCAATGACTACAAAC
CCAATGAATAATATGTCAAGTGGATCTGCTGCCAATATGATGCACCCAATAAGTAATCCA
ACTACAGGCCATCACATCAACCCTTTGAATGCTCAAATAAATCCTCATTCTGTGGTCAAA
CCAGTGAGTCATCATGACATGATACCAGCTAGTGTTGTACCTGCTGCTCATCATACAGCT
CCGATCAATCCACGAACATCAAATCTAGCAGCTAGGCTTCCACACAGGAGAGGTGATCAT
CATATGTTTTTGACATCTGATGATAATGCAATGATGAAGCACATTGAAGAAACTCATATC
CCAGATGGCCGTGACTTTGATGTCAAGCCTCTTGTTCATATTATTGAGGATATTGTGCAT
CGCGCTACTCCCATTGCTGGACATGTTCATGAAGCTAAAGTTCAAGCACATTTGGAAGCA
TTGGAAGAGAAGGCTCCCCACAGTGGACTTACTGACATACTCAACTATTTGGCATATCCT
ATTCATAGAATTAGTATGGAGTTGATAAGCAAATGTGCTAACAAAGAAGATGCACACTCC
ACAACAATGTCACTGCTTCATTCACTCACAACCTATGCCTGGGACACAAAAGTTGTGATA
ACATTCGCGGCTTTTGCCCAGCAATATGGTCAATTTGGTCTGCTTGCTCATCAGTATACT
ACAAATCCTCTGGCTAAGTCTGTTGCAATCATCATGGAACTTCCAGAAATTATGAGTCGT
CAAGATGTTCTCAAGCATAAATTTGACGCGATCCATGATCTGATCGACAAAATGTTGGAT
GTAACAAAGTGTATTATCGAGTTTAGAGACGTTCAAACGTCTCACAGTCAACATGTTATC
ACACAAGAATTGGAAATGTTGATCAATACGGCCCATATTTCCACTGCTGCTTACTGGACT
ATGAGGGCTGCTGTCATGTGTGCTGCTATGATATTGAATCTCATTGCCATTGGACACGAG
CAAATTTCTTCAACATCTGAGTCTTGGGAGTTATCTAGTTTGACTCACAAGCTAGCAAAC
ATATTGGATCATCTCAAAAAGGTTCTTAACCTTTGTCACCAAAAGATTGAGGAGAAGAGG
CAACATGATGCATTTGAAGCGCTTCTGCGACTCCTCAGGACACCTCACATTGATAACATG
AAGATACTCTCAATCTTGATTCACTCCAGGGATGATCAACTCCCACTTTTTGATGGAACT
CATAAGAGAAGGGTGAGTCTTGATGTTCTAAGGAGGAAGCATGTTCTACTATTGATCTCT
GATCTAGACATTGCACCCGAAGAACTCTTTATCCTCCACCACATGTACGCTGAATCCAAG
ATGCAACCAAACAGGCCAGAGAGCAACTATGAGGTTGTATGGATCCCTGTGGTTGACAAG
AGGCTAACACCGTGGACTGAAGCAAAACAAATGAAATTTGAAGAAGGACAAGCGTCAATG
CCATGGTACTCAGTGGCACATCCATCGATGATCGATCCAGCAGTGATAAGATGCATTAAG
GAGGTGTGGGGATTCAAGAAAAAGCCTCAGCTTGTTGTTCTTGATCCACAAGGCAAAGAA
TCAAACAACAATGCTTACCATATGTTATGGATTTGGGGAAGTTTGGCTTTTCCTTTTACT
AAAGCTAGGGAAACAGCTCTGTGGAAGGAACAATCTTGGAATATTGAACTCTTAGCTGAT
TCCATTGATCAAAACATTTTCACTTGGATAAGTGAAGGCAAATGCATATGCTTGTACGGA
GGAGAAGATATTGAATGGATCAGATCATTCACCTCATCAACGCGAGCTGTTGCAAATGCA
GCTCGCGTTCCACTAGAGATGCTCTACGTGGGGAAAAAGAACCCAAAAGAAAGAGTCCGG
AAGAACAGCTCAATAATCCAAATGGAAAACTTGAGCCATGTGGTGCAAGACCAAACTCTA
ATTTGGTTCTTTTGGGAAAGGCTAGAAAGCATGTGGCACTCTAGGACTCAACAAGACATC
CCCGGTGAAAGTGACCCGATCCTTCAGGAGATTGTGACGATTTTGAGCTATGATGGAAGT
GATCTTGGATGGGCTGTATTCAGCCGCGGATTGGCTGAGATGACTAGAGGTAAAGGTGAT
CTGATAGTGCAAGTTATGAAGGGATTTGATCGTTGGAGAAATGAAGTGAGTGATATAACT
ACATTTGTTCCTGCATTGGACCGTCAACTTCGTGATCTTCATAGTCCACATCATTGTACT
CGACTAATTCTACCGAGTACCTCTGGTCATATTCCTGAGAGAGTGGTTTGTGCTGAATGT
GGCCGTCCAATGGACAAGTTTATCATGTATCGCTGCTGCATTGAGTGA

Peptide Sequence

PEP ID

Solyc05g013850.2.1
PEP Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

MTSINPLNEKVSMNNPMTTNPMNNMSSGSAANMMHPISNPTTGHHINPLNAQINPHSVVK
PVSHHDMIPASVVPAAHHTAPINPRTSNLAARLPHRRGDHHMFLTSDDNAMMKHIEETHI
PDGRDFDVKPLVHIIEDIVHRATPIAGHVHEAKVQAHLEALEEKAPHSGLTDILNYLAYP
IHRISMELISKCANKEDAHSTTMSLLHSLTTYAWDTKVVITFAAFAQQYGQFGLLAHQYT
TNPLAKSVAIIMELPEIMSRQDVLKHKFDAIHDLIDKMLDVTKCIIEFRDVQTSHSQHVI
TQELEMLINTAHISTAAYWTMRAAVMCAAMILNLIAIGHEQISSTSESWELSSLTHKLAN
ILDHLKKVLNLCHQKIEEKRQHDAFEALLRLLRTPHIDNMKILSILIHSRDDQLPLFDGT
HKRRVSLDVLRRKHVLLLISDLDIAPEELFILHHMYAESKMQPNRPESNYEVVWIPVVDK
RLTPWTEAKQMKFEEGQASMPWYSVAHPSMIDPAVIRCIKEVWGFKKKPQLVVLDPQGKE
SNNNAYHMLWIWGSLAFPFTKARETALWKEQSWNIELLADSIDQNIFTWISEGKCICLYG
GEDIEWIRSFTSSTRAVANAARVPLEMLYVGKKNPKERVRKNSSIIQMENLSHVVQDQTL
IWFFWERLESMWHSRTQQDIPGESDPILQEIVTILSYDGSDLGWAVFSRGLAEMTRGKGD
LIVQVMKGFDRWRNEVSDITTFVPALDRQLRDLHSPHHCTRLILPSTSGHIPERVVCAEC
GRPMDKFIMYRCCIE*

Transcript Sequence

Transcript ID

Solyc05g013850.2.1
Transcript Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

TTACAACACACAAAAATATTTAACTCCACTCTTTCTATAAACCCTTTAGTTTTTTTTTCC
ATCCCTTGAAATGACAAGTATTAACCCATTGAATGAAAAAGTATCCATGAACAACCCAAT
GACTACAAACCCAATGAATAATATGTCAAGTGGATCTGCTGCCAATATGATGCACCCAAT
AAGTAATCCAACTACAGGCCATCACATCAACCCTTTGAATGCTCAAATAAATCCTCATTC
TGTGGTCAAACCAGTGAGTCATCATGACATGATACCAGCTAGTGTTGTACCTGCTGCTCA
TCATACAGCTCCGATCAATCCACGAACATCAAATCTAGCAGCTAGGCTTCCACACAGGAG
AGGTGATCATCATATGTTTTTGACATCTGATGATAATGCAATGATGAAGCACATTGAAGA
AACTCATATCCCAGATGGCCGTGACTTTGATGTCAAGCCTCTTGTTCATATTATTGAGGA
TATTGTGCATCGCGCTACTCCCATTGCTGGACATGTTCATGAAGCTAAAGTTCAAGCACA
TTTGGAAGCATTGGAAGAGAAGGCTCCCCACAGTGGACTTACTGACATACTCAACTATTT
GGCATATCCTATTCATAGAATTAGTATGGAGTTGATAAGCAAATGTGCTAACAAAGAAGA
TGCACACTCCACAACAATGTCACTGCTTCATTCACTCACAACCTATGCCTGGGACACAAA
AGTTGTGATAACATTCGCGGCTTTTGCCCAGCAATATGGTCAATTTGGTCTGCTTGCTCA
TCAGTATACTACAAATCCTCTGGCTAAGTCTGTTGCAATCATCATGGAACTTCCAGAAAT
TATGAGTCGTCAAGATGTTCTCAAGCATAAATTTGACGCGATCCATGATCTGATCGACAA
AATGTTGGATGTAACAAAGTGTATTATCGAGTTTAGAGACGTTCAAACGTCTCACAGTCA
ACATGTTATCACACAAGAATTGGAAATGTTGATCAATACGGCCCATATTTCCACTGCTGC
TTACTGGACTATGAGGGCTGCTGTCATGTGTGCTGCTATGATATTGAATCTCATTGCCAT
TGGACACGAGCAAATTTCTTCAACATCTGAGTCTTGGGAGTTATCTAGTTTGACTCACAA
GCTAGCAAACATATTGGATCATCTCAAAAAGGTTCTTAACCTTTGTCACCAAAAGATTGA
GGAGAAGAGGCAACATGATGCATTTGAAGCGCTTCTGCGACTCCTCAGGACACCTCACAT
TGATAACATGAAGATACTCTCAATCTTGATTCACTCCAGGGATGATCAACTCCCACTTTT
TGATGGAACTCATAAGAGAAGGGTGAGTCTTGATGTTCTAAGGAGGAAGCATGTTCTACT
ATTGATCTCTGATCTAGACATTGCACCCGAAGAACTCTTTATCCTCCACCACATGTACGC
TGAATCCAAGATGCAACCAAACAGGCCAGAGAGCAACTATGAGGTTGTATGGATCCCTGT
GGTTGACAAGAGGCTAACACCGTGGACTGAAGCAAAACAAATGAAATTTGAAGAAGGACA
AGCGTCAATGCCATGGTACTCAGTGGCACATCCATCGATGATCGATCCAGCAGTGATAAG
ATGCATTAAGGAGGTGTGGGGATTCAAGAAAAAGCCTCAGCTTGTTGTTCTTGATCCACA
AGGCAAAGAATCAAACAACAATGCTTACCATATGTTATGGATTTGGGGAAGTTTGGCTTT
TCCTTTTACTAAAGCTAGGGAAACAGCTCTGTGGAAGGAACAATCTTGGAATATTGAACT
CTTAGCTGATTCCATTGATCAAAACATTTTCACTTGGATAAGTGAAGGCAAATGCATATG
CTTGTACGGAGGAGAAGATATTGAATGGATCAGATCATTCACCTCATCAACGCGAGCTGT
TGCAAATGCAGCTCGCGTTCCACTAGAGATGCTCTACGTGGGGAAAAAGAACCCAAAAGA
AAGAGTCCGGAAGAACAGCTCAATAATCCAAATGGAAAACTTGAGCCATGTGGTGCAAGA
CCAAACTCTAATTTGGTTCTTTTGGGAAAGGCTAGAAAGCATGTGGCACTCTAGGACTCA
ACAAGACATCCCCGGTGAAAGTGACCCGATCCTTCAGGAGATTGTGACGATTTTGAGCTA
TGATGGAAGTGATCTTGGATGGGCTGTATTCAGCCGCGGATTGGCTGAGATGACTAGAGG
TAAAGGTGATCTGATAGTGCAAGTTATGAAGGGATTTGATCGTTGGAGAAATGAAGTGAG
TGATATAACTACATTTGTTCCTGCATTGGACCGTCAACTTCGTGATCTTCATAGTCCACA
TCATTGTACTCGACTAATTCTACCGAGTACCTCTGGTCATATTCCTGAGAGAGTGGTTTG
TGCTGAATGTGGCCGTCCAATGGACAAGTTTATCATGTATCGCTGCTGCATTGAGTGAGG
ATTTATGGTGGATGAATGGAGCTCCTAGAGGACTATAAATTTGAATAAAAGGACCATTTA
CTAGTCCTCTTGTGAGTATTATTATTGTTCTTACTTTTGCCTTTTTTGATATTCATGTAC
TTGTTTTGATATTTCAGTGTGTGATGTAATGCTATAGGCTATACAGCCTTATGCAATATT
TAGTGAAAATCAATAAAAGTATTTCATCATTGATGGAGTAAGAATCTAACAT