Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g013740.3.1
CDS Infomation	Coilin-like protein (AHRD V3.3 - U6BQ51_NICBE)
Sequence	ATGGAGGGCGTTAGGCTTCGATTGTCGTTCAATGACCCTGACATTCTCAGCGACCTGCAG AAATCTGAGGGTTTCGTAAAAACTTGGCTTCTTCTCAAACCCCAACAGCACAGAACTGTT TCTGATCTTTCTTCATATCTTCTCCACACTTTTCAGCTCCATGATTCTTGTCCTAATGGC ATCCTCCTCTCTATGGATGGTTTTGTCTTGCCTCCTTTTGAGTCAACATGTATTTTGGAG GACAAAGATGTAGTCAGCGTGAAGAAGAAAAGAGGGCATTTAGCTATCGATGGAAATAAT GGACCGAATGTGATTTTAGCTGTCGAAAGAAATAATGGTCCCAATGCAGTTGAAAAACTC CAAATTGTTGAGAAGCAACCTTTAAAGGGTGGACCATTGTTATTGGCAAATGAGGCATTT GATCGTGGTGCTGGATGTTATGAGTCTTGTGACAGCGAAGAGACTGAAGATGAGTCTGAA AAGGAGGAAGAGGCAGAACCAGAGAAAGATACTTCGCACCAGGAAAATGCTTTGGCTGGC AATGCAATTTCCAAAAAAAGAAAAGCATCAGAAATGCTTCCTAGCTCAAAGAAAAAGAAA CACTGTTCTGATGTTAAGGCGAAGCTTGATGAGCAGACCAAGAAACAAGAAGATCTTACT AGAAAGAAACGGAAGGTGTCTGATTCAAATAACAAAGATATGGAGAATAATAAAGGAAAT GCTGAGAGTAATGAGGACAGTCATATCACACCCAGCACGAAGAAAACTCACGCGCTTCAA CAAAATGGCGTGGAGAATATAGAGGCGCCCCCCAACTCTGATGCGACTAAAAAAAAGGGC CCCAGTAGAAGTGCCAAGAGAAAATCTGCTAAAAGAAGATGGTTGCGAGAGATGGCCAAA ATTAAGGAGAAGAATGCAGATGCTGAATCGGAAGGGCTGCGGAACTGGAAAGAAATGCAG GCTAAAGCTGGAAAGGGAGAGCCTAGCTGCCAACCAAAGGGGCGATTGAATGACGGGGCT AATGGTCACCGAAATGGGAAGCAGCAGAAAACTAAAACTAAAAAAGAAGAGGTAACTGGC CAACCAAAGGGACTTCTGCATAGGAAGCAATTCCATAGTGAAGATAAGAATGGAGATACA AACGAAGAAAAGCAAGCAGAAGAGAAAAGCAAATCATGTGGACAATCATGTCAAAATAGT GACTCAGAAGATGAAGTTGTTCCAGTTGAAATAAGGCCTGGGCATATTCGCTTTGAACCT GTTGGAAAAGAACAAGTTTCAAAGCAGAGTGAAGAAGAAATGGAAAGTTTCAAGTGGAAT GGTATGATGAGCAAGAAAAAGGGACAGAAATGGGGCCAAGAGAAAGTTTCATTTCCCCAA AAGACTGATTCTCTAGGTTCAAACAAAGAATATCCTGATATGATGAGTCGTGAGAGACAG AAATGGATCCAAGAGAAAGACTCATTTTCCCAAAAGAATGATTCCCTTAGTTCAAACAAA GAACATCCTGAGATAATGAATCGTAAAAGACAGAAATGGGGCCAAGAGAATATTTCATTT GCCCAAAAGAATGATTCTCCAGGTTCAAGCAAAGAACATCCTGATATGATGAACCGTGAG AGACAGAAATGGAGCCAAGAGAAAAACTTGTTTTACCAAAAGAATGATTCTCTCGGTTCA AACAAAGAACATCCCGAGATAATGAATCGTAATAGACAGAACTGGGGCGAAGAGAATGTT TCATTTTCCCAAAAGAATGATTCTCTAGATTCAAACAAAAAACATCCTGAGATGTTGAAT GGTGAAAAGGACCCTCATTTCAATGGATCAATTGACTTCAATACACTTCCTTTTCTTTCT GGCCAGCCCAAGGAAGGTCTTGTGATTGCATATCGGCTGCTTGAGTTATCATCAACCTGG ACCCCTGAAGTTTCCTCCTATCGGGTTGGGAAAATATCATCGTATAATTCTGAAGCAAAT AGAGTTTTGCTGATGCCAGTAGCTGAATTTCCAGTCATTTGTACTGAGGATGAGTCTTCA AAGCAACCAGATAGCTCTATTTATAATGAAGACGGATCTTTGGAGATAGAATTTTCAGCG CTTCTTGAAGTTCGTCTGATGAATAGTACTCCAGATCAAGGAGTACATGAAGGGGTTATT GAGGGTTCTGCTGCCAATGAGTCCACTCCAGTGCTTGGAAGCAGTAAAAAGAAAAATGAA ACTCCAGTTCCTGGAGCTGGAGAAGTAAGCAATGGAAAACAAACACGATCTACCCCTTCA GAAAATGGCGGAGTAAACCTGTGGGAGCAATTCAGTGATACTCTAAAGTCCAAGAAGGCA GAATTAGCTCAGGAAAGTAATTGGGATAAGGCAAGTACTGGAAAGAGCCCTTGGTCATAT CGACCCATGAGAGGCACTGCGCTAGGCCCTACAATGGCCTTCCTTAGATCCCAAAAGAAA ATATAA

Peptide Sequence

PEP ID	Solyc05g013740.3.1
PEP Infomation	Coilin-like protein (AHRD V3.3 - U6BQ51_NICBE)
Sequence	MEGVRLRLSFNDPDILSDLQKSEGFVKTWLLLKPQQHRTVSDLSSYLLHTFQLHDSCPNG ILLSMDGFVLPPFESTCILEDKDVVSVKKKRGHLAIDGNNGPNVILAVERNNGPNAVEKL QIVEKQPLKGGPLLLANEAFDRGAGCYESCDSEETEDESEKEEEAEPEKDTSHQENALAG NAISKKRKASEMLPSSKKKKHCSDVKAKLDEQTKKQEDLTRKKRKVSDSNNKDMENNKGN AESNEDSHITPSTKKTHALQQNGVENIEAPPNSDATKKKGPSRSAKRKSAKRRWLREMAK IKEKNADAESEGLRNWKEMQAKAGKGEPSCQPKGRLNDGANGHRNGKQQKTKTKKEEVTG QPKGLLHRKQFHSEDKNGDTNEEKQAEEKSKSCGQSCQNSDSEDEVVPVEIRPGHIRFEP VGKEQVSKQSEEEMESFKWNGMMSKKKGQKWGQEKVSFPQKTDSLGSNKEYPDMMSRERQ KWIQEKDSFSQKNDSLSSNKEHPEIMNRKRQKWGQENISFAQKNDSPGSSKEHPDMMNRE RQKWSQEKNLFYQKNDSLGSNKEHPEIMNRNRQNWGEENVSFSQKNDSLDSNKKHPEMLN GEKDPHFNGSIDFNTLPFLSGQPKEGLVIAYRLLELSSTWTPEVSSYRVGKISSYNSEAN RVLLMPVAEFPVICTEDESSKQPDSSIYNEDGSLEIEFSALLEVRLMNSTPDQGVHEGVI EGSAANESTPVLGSSKKKNETPVPGAGEVSNGKQTRSTPSENGGVNLWEQFSDTLKSKKA ELAQESNWDKASTGKSPWSYRPMRGTALGPTMAFLRSQKKI*

Transcript Sequence

Transcript ID	Solyc05g013740.3.1
Transcript Infomation	Coilin-like protein (AHRD V3.3 - U6BQ51_NICBE)
Sequence	TGAAGAAAAATAAATAAATTTAGATATCCAATTAACTCATTATACTCGTAAGTTGGGACA AAGAAGAAAGAAAATAAAAGGTAAAACGGAGTAGTTGGCAAATTAGGGAGGTTTATGCCG GAAGCTGCCAGGGTTTAACTAAAGGGAAGTGAAAAGAGTGTAGCTACAATTCATCTGCAA AAGCTCCAAAGCCGGATTCTTTCTCTTGCATGAGCAATAATGGAGGGCGTTAGGCTTCGA TTGTCGTTCAATGACCCTGACATTCTCAGCGACCTGCAGAAATCTGAGGGTTTCGTAAAA ACTTGGCTTCTTCTCAAACCCCAACAGCACAGAACTGTTTCTGATCTTTCTTCATATCTT CTCCACACTTTTCAGCTCCATGATTCTTGTCCTAATGGCATCCTCCTCTCTATGGATGGT TTTGTCTTGCCTCCTTTTGAGTCAACATGTATTTTGGAGGACAAAGATGTAGTCAGCGTG AAGAAGAAAAGAGGGCATTTAGCTATCGATGGAAATAATGGACCGAATGTGATTTTAGCT GTCGAAAGAAATAATGGTCCCAATGCAGTTGAAAAACTCCAAATTGTTGAGAAGCAACCT TTAAAGGGTGGACCATTGTTATTGGCAAATGAGGCATTTGATCGTGGTGCTGGATGTTAT GAGTCTTGTGACAGCGAAGAGACTGAAGATGAGTCTGAAAAGGAGGAAGAGGCAGAACCA GAGAAAGATACTTCGCACCAGGAAAATGCTTTGGCTGGCAATGCAATTTCCAAAAAAAGA AAAGCATCAGAAATGCTTCCTAGCTCAAAGAAAAAGAAACACTGTTCTGATGTTAAGGCG AAGCTTGATGAGCAGACCAAGAAACAAGAAGATCTTACTAGAAAGAAACGGAAGGTGTCT GATTCAAATAACAAAGATATGGAGAATAATAAAGGAAATGCTGAGAGTAATGAGGACAGT CATATCACACCCAGCACGAAGAAAACTCACGCGCTTCAACAAAATGGCGTGGAGAATATA GAGGCGCCCCCCAACTCTGATGCGACTAAAAAAAAGGGCCCCAGTAGAAGTGCCAAGAGA AAATCTGCTAAAAGAAGATGGTTGCGAGAGATGGCCAAAATTAAGGAGAAGAATGCAGAT GCTGAATCGGAAGGGCTGCGGAACTGGAAAGAAATGCAGGCTAAAGCTGGAAAGGGAGAG CCTAGCTGCCAACCAAAGGGGCGATTGAATGACGGGGCTAATGGTCACCGAAATGGGAAG CAGCAGAAAACTAAAACTAAAAAAGAAGAGGTAACTGGCCAACCAAAGGGACTTCTGCAT AGGAAGCAATTCCATAGTGAAGATAAGAATGGAGATACAAACGAAGAAAAGCAAGCAGAA GAGAAAAGCAAATCATGTGGACAATCATGTCAAAATAGTGACTCAGAAGATGAAGTTGTT CCAGTTGAAATAAGGCCTGGGCATATTCGCTTTGAACCTGTTGGAAAAGAACAAGTTTCA AAGCAGAGTGAAGAAGAAATGGAAAGTTTCAAGTGGAATGGTATGATGAGCAAGAAAAAG GGACAGAAATGGGGCCAAGAGAAAGTTTCATTTCCCCAAAAGACTGATTCTCTAGGTTCA AACAAAGAATATCCTGATATGATGAGTCGTGAGAGACAGAAATGGATCCAAGAGAAAGAC TCATTTTCCCAAAAGAATGATTCCCTTAGTTCAAACAAAGAACATCCTGAGATAATGAAT CGTAAAAGACAGAAATGGGGCCAAGAGAATATTTCATTTGCCCAAAAGAATGATTCTCCA GGTTCAAGCAAAGAACATCCTGATATGATGAACCGTGAGAGACAGAAATGGAGCCAAGAG AAAAACTTGTTTTACCAAAAGAATGATTCTCTCGGTTCAAACAAAGAACATCCCGAGATA ATGAATCGTAATAGACAGAACTGGGGCGAAGAGAATGTTTCATTTTCCCAAAAGAATGAT TCTCTAGATTCAAACAAAAAACATCCTGAGATGTTGAATGGTGAAAAGGACCCTCATTTC AATGGATCAATTGACTTCAATACACTTCCTTTTCTTTCTGGCCAGCCCAAGGAAGGTCTT GTGATTGCATATCGGCTGCTTGAGTTATCATCAACCTGGACCCCTGAAGTTTCCTCCTAT CGGGTTGGGAAAATATCATCGTATAATTCTGAAGCAAATAGAGTTTTGCTGATGCCAGTA GCTGAATTTCCAGTCATTTGTACTGAGGATGAGTCTTCAAAGCAACCAGATAGCTCTATT TATAATGAAGACGGATCTTTGGAGATAGAATTTTCAGCGCTTCTTGAAGTTCGTCTGATG AATAGTACTCCAGATCAAGGAGTACATGAAGGGGTTATTGAGGGTTCTGCTGCCAATGAG TCCACTCCAGTGCTTGGAAGCAGTAAAAAGAAAAATGAAACTCCAGTTCCTGGAGCTGGA GAAGTAAGCAATGGAAAACAAACACGATCTACCCCTTCAGAAAATGGCGGAGTAAACCTG TGGGAGCAATTCAGTGATACTCTAAAGTCCAAGAAGGCAGAATTAGCTCAGGAAAGTAAT TGGGATAAGGCAAGTACTGGAAAGAGCCCTTGGTCATATCGACCCATGAGAGGCACTGCG CTAGGCCCTACAATGGCCTTCCTTAGATCCCAAAAGAAAATATAAGATGAAGTTGCAGTT GCATATTTTGTTCATATTATCGTATATTAACCCGTTTCATTCTCTTTAAGTTTTGCAAAA TTCTCACTAACGAGAGAATTAACTATGTTTTAACTTCTCGATCATGAAATTACCCAGGAA GGTTTGCAGTGTATAATTGGAGTTGTTGATGCACCCCTTTATGTACTGTTTCTTAAATTT TGGTTGCTTATTAGTGTAAAGAAATTAAAGGATATGAAAAGCTCTATATCTGCATTCCAG TAAAACTCTGGGATCCTGTTAAATTTTTGGAATGAAATATAAGTGTCGGATGTACCTTTA TT