Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g013720.3.1
CDS Infomation

Alpha-galactosidase (AHRD V3.3 *** K4BY93_SOLLC)
Sequence

ATGATCTTGAAAACTTATATTTTCATCATTTTCACTACTCTTTTTCTTCACTGGGAAACC
TCAGAAACTAAATCTCGGGGCGATATTGGACAAGCCAGCTTGCCACCTAGGGGTTGGAAC
TCCTATGACTCATTTTGTTGGACCATCACCGAGGAAGAGTTTCTTCAGAATGCAGAACTT
GTAGCACAACGATTAAAACCTCATGGTTATGAGTATGTTGTCGTGGACTTCCTTTGGTAT
AGGAAGAAAACAATAGGTGCTTATACTGATTCTTATGGTTTTGATGTCTTTGATGAGTGG
GGAAGGATGGTTCCAGACCCTGGAAGATGGCCATCCTCTCAAGGTGGAAAAGGGTTTTCT
CAAGTTGCGGGGAAGGTTCATAGCATGGGACTGAAATTTGGGATTCATGTAATGAGAGGT
TTAAGTCTACAAGCATTCAATGCTAACACTCTCATACTGGATACCACTACGGGCAAAGCT
TATGAGGAGGCTGGTCGACAATGGCGTGCACAAGATATTGGAATTAAGGAGAGGACTTGT
GCATGGATGAAAAATGGTTTCATGAGTGTGAATACCAAGTTGGGAGCTGGAAGAGCATTC
CTTAGGTCACTCTATCAACAATATGCTGATTGGGGTGTTGATTTTGTGAAACTTGACTGT
GTATTCGGTGATGACTTGGATTTAGATGAGATAATCGTAGTTTCAGAGGTATTGAATGAG
CTTAGCCGACCTATCATATATTCCTTGTCCCCTGGAACTAATGCAAAACCAATCATAGCG
AAGGAAGTTAGTGGATTGGTCAATATGTATCGAGTAACTGGGGATGACTGGGATACTTGG
GAAGATGTCGCTGCTCATTTCAACGTTGCGAGGGACTTCACTGCTGCTAACTTAGTAGGA
GTCAAGGGCCTAAAGGGGAAGTCGTGGCCTGACTTAGATATGCTACCACTTGGATGGTTA
ACAGAAGCAGGTTCAAATGAAGGCCCACACAGATATTGCAGGCTTAATCTGGATGAGCAA
CGTACTCAGGTGACCCTATGGTCCATGGTCAGGTCCCCTCTCATCTTTGGTGGAGATATG
AGAAAGCTTGATGCTTCTACATTCAGTCTTCTTACAAATCCTACTCTGTTGGAGATCAAC
TGGTTTAGCTCTAACAACATGGAGTTTCATTACGTGAAAGGCTCCTTAAGTTCATCCGGA
AAACATAGCTTGAGTAACCATACTGAGGATAAAGAAAAAATAAATGTGTTGGAGAAGCGA
GTTTTGGCTCTAAGGAGCTGCAAAGATGTAAAGGCAAATGGCTGGTCTACTAAAGTTCTT
GACAGTGTAGAGAAAGTGTGCTGGGAAGAGAACTCAAATAAACGCCAGGCACCTTTTTGT
CTAAACAAGAGAGAAGCACTTTCAGCATCAGAAGGAGAGACGGTATATCAGCACCAAAAT
CTCGGGAGACTTCACTTATTCGTAACAGAGAGAACAGAACTTTGTTTTGGTGCATCTTCA
AATAGAAAGCTTGCAGCTAACGAGATCAGCAGAGGTTCATTTTCACGGTGCAGATCTCAT
GCCAACCAGATGTGGGAGAACTACAATGGAACCCTCATGAATAGTTATTCCGGTTTTTGT
GCTATCATGGATTTTGTCAGAGCTTCTTCTGGTGGAATCAGGTCCTGGCTTGCAACTGGA
AGGAGAGGAGAGATCTACTTGGCTTTCTTCAATTTGAACAACCAGGTGACAAAAATGTCA
GCGAAGCTATCAGACATAACGAACGCAATTCATGCTACAAGTTCAAAGTGCTCAGGTAGA
GAAGTGTGGAGTGGCACAAATCTTGGAGCCATAAAGGACTCGATATCTATGTCAGTAAAC
GCTCACGGATGTGCATTGTTTGTGTTGAACTGCACATAA

Peptide Sequence

PEP ID

Solyc05g013720.3.1
PEP Infomation

Alpha-galactosidase (AHRD V3.3 *** K4BY93_SOLLC)
Sequence

MILKTYIFIIFTTLFLHWETSETKSRGDIGQASLPPRGWNSYDSFCWTITEEEFLQNAEL
VAQRLKPHGYEYVVVDFLWYRKKTIGAYTDSYGFDVFDEWGRMVPDPGRWPSSQGGKGFS
QVAGKVHSMGLKFGIHVMRGLSLQAFNANTLILDTTTGKAYEEAGRQWRAQDIGIKERTC
AWMKNGFMSVNTKLGAGRAFLRSLYQQYADWGVDFVKLDCVFGDDLDLDEIIVVSEVLNE
LSRPIIYSLSPGTNAKPIIAKEVSGLVNMYRVTGDDWDTWEDVAAHFNVARDFTAANLVG
VKGLKGKSWPDLDMLPLGWLTEAGSNEGPHRYCRLNLDEQRTQVTLWSMVRSPLIFGGDM
RKLDASTFSLLTNPTLLEINWFSSNNMEFHYVKGSLSSSGKHSLSNHTEDKEKINVLEKR
VLALRSCKDVKANGWSTKVLDSVEKVCWEENSNKRQAPFCLNKREALSASEGETVYQHQN
LGRLHLFVTERTELCFGASSNRKLAANEISRGSFSRCRSHANQMWENYNGTLMNSYSGFC
AIMDFVRASSGGIRSWLATGRRGEIYLAFFNLNNQVTKMSAKLSDITNAIHATSSKCSGR
EVWSGTNLGAIKDSISMSVNAHGCALFVLNCT*

Transcript Sequence

Transcript ID

Solyc05g013720.3.1
Transcript Infomation

Alpha-galactosidase (AHRD V3.3 *** K4BY93_SOLLC)
Sequence

CTTTTTCCCTTTTTTCTTTCACGGAAACACCTGGTTTAGACTATATACATAGTACAATAT
TTGAGGAAGATTGAAGCTAATTTTAAAGTAATAAAAGACCTAAAAATGCTTGTAATTATG
TATATCAGTGTATATGACACATTAATTTGATTGTGTCATTGGTACTCCACCTCACGGTCC
TGAAGGCATAACAGAAAAAATAGCTTTGTGAGGTGACACTTGCCCATTTCCTCCGAAATA
GCATCCGGTGATTATGTCTTCACAATCACACTCTTTTTTACACCTCAACTAACCCTTTTT
TTCATTCAATTTTGCTATCATATTCAAACACCTAAACTCAAAATCACTCAATTTTGTACC
TCTTGTTAGCAGTAAAGACTACTATTCTGAAAAAGGGATGATCTTGAAAACTTATATTTT
CATCATTTTCACTACTCTTTTTCTTCACTGGGAAACCTCAGAAACTAAATCTCGGGGCGA
TATTGGACAAGCCAGCTTGCCACCTAGGGGTTGGAACTCCTATGACTCATTTTGTTGGAC
CATCACCGAGGAAGAGTTTCTTCAGAATGCAGAACTTGTAGCACAACGATTAAAACCTCA
TGGTTATGAGTATGTTGTCGTGGACTTCCTTTGGTATAGGAAGAAAACAATAGGTGCTTA
TACTGATTCTTATGGTTTTGATGTCTTTGATGAGTGGGGAAGGATGGTTCCAGACCCTGG
AAGATGGCCATCCTCTCAAGGTGGAAAAGGGTTTTCTCAAGTTGCGGGGAAGGTTCATAG
CATGGGACTGAAATTTGGGATTCATGTAATGAGAGGTTTAAGTCTACAAGCATTCAATGC
TAACACTCTCATACTGGATACCACTACGGGCAAAGCTTATGAGGAGGCTGGTCGACAATG
GCGTGCACAAGATATTGGAATTAAGGAGAGGACTTGTGCATGGATGAAAAATGGTTTCAT
GAGTGTGAATACCAAGTTGGGAGCTGGAAGAGCATTCCTTAGGTCACTCTATCAACAATA
TGCTGATTGGGGTGTTGATTTTGTGAAACTTGACTGTGTATTCGGTGATGACTTGGATTT
AGATGAGATAATCGTAGTTTCAGAGGTATTGAATGAGCTTAGCCGACCTATCATATATTC
CTTGTCCCCTGGAACTAATGCAAAACCAATCATAGCGAAGGAAGTTAGTGGATTGGTCAA
TATGTATCGAGTAACTGGGGATGACTGGGATACTTGGGAAGATGTCGCTGCTCATTTCAA
CGTTGCGAGGGACTTCACTGCTGCTAACTTAGTAGGAGTCAAGGGCCTAAAGGGGAAGTC
GTGGCCTGACTTAGATATGCTACCACTTGGATGGTTAACAGAAGCAGGTTCAAATGAAGG
CCCACACAGATATTGCAGGCTTAATCTGGATGAGCAACGTACTCAGGTGACCCTATGGTC
CATGGTCAGGTCCCCTCTCATCTTTGGTGGAGATATGAGAAAGCTTGATGCTTCTACATT
CAGTCTTCTTACAAATCCTACTCTGTTGGAGATCAACTGGTTTAGCTCTAACAACATGGA
GTTTCATTACGTGAAAGGCTCCTTAAGTTCATCCGGAAAACATAGCTTGAGTAACCATAC
TGAGGATAAAGAAAAAATAAATGTGTTGGAGAAGCGAGTTTTGGCTCTAAGGAGCTGCAA
AGATGTAAAGGCAAATGGCTGGTCTACTAAAGTTCTTGACAGTGTAGAGAAAGTGTGCTG
GGAAGAGAACTCAAATAAACGCCAGGCACCTTTTTGTCTAAACAAGAGAGAAGCACTTTC
AGCATCAGAAGGAGAGACGGTATATCAGCACCAAAATCTCGGGAGACTTCACTTATTCGT
AACAGAGAGAACAGAACTTTGTTTTGGTGCATCTTCAAATAGAAAGCTTGCAGCTAACGA
GATCAGCAGAGGTTCATTTTCACGGTGCAGATCTCATGCCAACCAGATGTGGGAGAACTA
CAATGGAACCCTCATGAATAGTTATTCCGGTTTTTGTGCTATCATGGATTTTGTCAGAGC
TTCTTCTGGTGGAATCAGGTCCTGGCTTGCAACTGGAAGGAGAGGAGAGATCTACTTGGC
TTTCTTCAATTTGAACAACCAGGTGACAAAAATGTCAGCGAAGCTATCAGACATAACGAA
CGCAATTCATGCTACAAGTTCAAAGTGCTCAGGTAGAGAAGTGTGGAGTGGCACAAATCT
TGGAGCCATAAAGGACTCGATATCTATGTCAGTAAACGCTCACGGATGTGCATTGTTTGT
GTTGAACTGCACATAATGTTGAATGTAACAAAGGATGTTATACATCAACCACATTGTATA
TTCATCTTTTGTACAACTTCTGTTGAATCCTTAAATGATGAAATGAAATACCACTATCCT
TGTGTCTTATCATTCTTGTTAAACTATCATATCGTTGAAAGTTGGGATGGGGGAC