Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g013300.1.1
CDS Infomation

Pseudomonas syringae pv tomato resis.
Sequence

ATGGGAACCAACTATTCCAAGCCAACAACTTCCATAAATGATGCTTCCAATTTGAGTAAT
CGCGTTCCTTTTGAAAGTTTTCGAGTTCCTTTTGTAGATTTGCAGGAAGCAACTAATAAC
TTTGATGACAAGTTTCTGATTGGAGTGGGTATATTTGGTAAGGTTTACAGGGGTGTTTTG
CGTGATGGTACAAAGGTGGCCCTGAAAAGACGTAAGCCTGAGTCTCCACAAGGTATTGAA
GAGTTCCGAACAGAAATTGAGATACTCTCACACTGCAGCCATCCACATCTGGTTTCACTG
ATAGGATACTGTGATGAAAGAAATGAGATGATTCTAATTTATGACTACATGGAGAATGGG
AACCTCAGTAAACGTTTGTATGGATCAGATCTATGTCTTCCCACTATGAGCTGGGAGCAG
AGGCTGGAGATATGCATCGGGGCAGCCAGAGGTCTTCACTACCTTCATAACAGTGCAGTT
ATACATCGTGATGTCAAGTCTACAAACATATTGCTTGATGAGAATTTTGTGGCAAAAATT
ACTGATTTTGGAATATCCAAGACAACGCCTGAGTTTGATCAAACCCATCTTAGCACAATG
GTGCAAGGAAGTATAGGCTACATTGACCCTGAATATTTTATAAGGGGACAACTGACAAAA
AAATCTGATGTTTATTCTTTCGGTGTTGTTTTATTCGAAGTTCTTTGTGCTAGGCCTGCC
ATAGGTCGTTCACATATGATCAGTTTAGCTGAATGGGCAGTAGAGACGCAGAAGATGGGA
CAGTTGGAACAAATTGTAGATCCCACTATTGTGGCCAAAATAAGACCAGAGTCCCTCAGG
ATGTTTGGAGAAACGGCAGTGAAATGCTTAGCTTCATCTAGTGAAAATAGGCCATCAATG
GGTGATGTGCTGTGGAAACTGGAGTATGCACTTCATCTCCAAGAGCCTATCATTCAAGAT
AATCCTGAATGA

Peptide Sequence

PEP ID

Solyc05g013300.1.1
PEP Infomation

Pseudomonas syringae pv tomato resis.
Sequence

MGTNYSKPTTSINDASNLSNRVPFESFRVPFVDLQEATNNFDDKFLIGVGIFGKVYRGVL
RDGTKVALKRRKPESPQGIEEFRTEIEILSHCSHPHLVSLIGYCDERNEMILIYDYMENG
NLSKRLYGSDLCLPTMSWEQRLEICIGAARGLHYLHNSAVIHRDVKSTNILLDENFVAKI
TDFGISKTTPEFDQTHLSTMVQGSIGYIDPEYFIRGQLTKKSDVYSFGVVLFEVLCARPA
IGRSHMISLAEWAVETQKMGQLEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSM
GDVLWKLEYALHLQEPIIQDNPE*

Transcript Sequence

Transcript ID

Solyc05g013300.1.1
Transcript Infomation

Pseudomonas syringae pv tomato resis.
Sequence

ATGGGAACCAACTATTCCAAGCCAACAACTTCCATAAATGATGCTTCCAATTTGAGTAAT
CGCGTTCCTTTTGAAAGTTTTCGAGTTCCTTTTGTAGATTTGCAGGAAGCAACTAATAAC
TTTGATGACAAGTTTCTGATTGGAGTGGGTATATTTGGTAAGGTTTACAGGGGTGTTTTG
CGTGATGGTACAAAGGTGGCCCTGAAAAGACGTAAGCCTGAGTCTCCACAAGGTATTGAA
GAGTTCCGAACAGAAATTGAGATACTCTCACACTGCAGCCATCCACATCTGGTTTCACTG
ATAGGATACTGTGATGAAAGAAATGAGATGATTCTAATTTATGACTACATGGAGAATGGG
AACCTCAGTAAACGTTTGTATGGATCAGATCTATGTCTTCCCACTATGAGCTGGGAGCAG
AGGCTGGAGATATGCATCGGGGCAGCCAGAGGTCTTCACTACCTTCATAACAGTGCAGTT
ATACATCGTGATGTCAAGTCTACAAACATATTGCTTGATGAGAATTTTGTGGCAAAAATT
ACTGATTTTGGAATATCCAAGACAACGCCTGAGTTTGATCAAACCCATCTTAGCACAATG
GTGCAAGGAAGTATAGGCTACATTGACCCTGAATATTTTATAAGGGGACAACTGACAAAA
AAATCTGATGTTTATTCTTTCGGTGTTGTTTTATTCGAAGTTCTTTGTGCTAGGCCTGCC
ATAGGTCGTTCACATATGATCAGTTTAGCTGAATGGGCAGTAGAGACGCAGAAGATGGGA
CAGTTGGAACAAATTGTAGATCCCACTATTGTGGCCAAAATAAGACCAGAGTCCCTCAGG
ATGTTTGGAGAAACGGCAGTGAAATGCTTAGCTTCATCTAGTGAAAATAGGCCATCAATG
GGTGATGTGCTGTGGAAACTGGAGTATGCACTTCATCTCCAAGAGCCTATCATTCAAGAT
AATCCTGAATGA