Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g013140.3.1
CDS Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT1G14020.1)
Sequence

ATGGAGGTTAGATCCGAGAGTGAGGTACATGTTAGAAGTGAGAAAGTACTACCATTACAA
GGGCAGATGATACAGAGGACTAGATTAAAAGTTTATTTTGTAAGGGTTTGTTCCAGCATT
TTGATATGGACATGTTTGGTTCAGCTTATTGCTGTTTGGGAGCTTTATAATCCACGTTGG
TTTTCGGGTTTTACTGGTTATACTACTAAGGTGTCTGTTCATGTTGAAGAGACTTTGCCT
TCTCCTTTGCTTCTTCTTCCACCTATTGTCACTTTGGTGTCCAAATGGCGATTAAAAAAC
GCCAGCTTAAAAGGAAATTATACAAATAATGGGTTTCTTCAAGTGTCCTGCAATGGTGGC
TTGAATCAAATGCGTGCAGCCATCTGTGACATGGTGACTGTTGCACGGCTTTTAAATCTA
ACTTTGGTTGTCCCAGAGCTTGATAAAACATCTTTCTGGGCAGACCCTAGCAATTTTGAT
GATATTTTTGATGTGAGACACTTCATTGATTCCCTAAGAGATGAAGTTCGGATAATAAAG
AGACTGCCAAAGAGGTTCAGCAGGAGATATGGATACCAACCGCTAGAAATGCCTCCTGTT
AGCTGGTCAAATGAAAAGTATTACTTGCAACAGATTCTGCCTCTCTTCAAAAAGCATCAA
GTAATACATTTCAACAGAACAGATACTAGGCTAGCAAACAATGGGATTCCTCTTGAGCTT
CAAAAACTCAGATGTCGTGTGAATTTCCAGGCATTGAAATTCACTCCAGATATTGAGGCT
TTGGGAGAAAAATTGGTACGATTGCTTCAGGAGAGAGGGCCATTTGTAGCATTGCATCTA
AGATATGAGATGGATATGTTGGCATTCTCTGGTTGTACCCATGGCTGCACTGAGGAGGAA
GCTGAGGAGCTCAAACGGTTAAGGTATGCATTCCCTTGGTGGAGGGAGAAAGAGATTGTA
TCTGAGGAGAAGAGATCTCAAGGATTGTGTCCTCTCACCCCAGAAGAGGCAGCATTGATT
TTGCAAGCGTTGGGTTTTGATAAAGACATACAAATATATATTGCATCTGGTGACATTTAT
GGAGGTGAACGTAGGCTTGCTTCTTTGAGAGCTGCCTTCCCAAAAATTGTGAAAAAGGAC
ATGCTGCTAGCACCTGGGGAATTGCAGCATTTCCAGAATCATTCATCTCAGATGGCAGCC
CTGGATTTCATCGTTTCAACTGCTAGTAATGTATTTGTTCCCACTTATGATGGGAACATG
GCTAAAGTTGTTGAAGGTCATCGTAGGTATCTTGGGTTTAAGAAAACCATTCTATTGGAT
CGAAAAAGACTGGTAGAGTTATTAGATTTGCATCAGAATGGAACACTTTCATGGGATGAG
TTTACAGCTACAGTCCGGCAGTCACATGAAGGACGAATGGGACAACTGTCTCGACGCAGA
GTCATTGCAGACAAACCAAAAGAAGAAGATTATTTTTATGCAAATCCACAGGAGTGTCTG
TGTGAGAGTAAAACCTGTGATGACTTGTTTGGGCCTGATAATTCCACTGCTGTCCAATGA

Peptide Sequence

PEP ID

Solyc05g013140.3.1
PEP Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT1G14020.1)
Sequence

MEVRSESEVHVRSEKVLPLQGQMIQRTRLKVYFVRVCSSILIWTCLVQLIAVWELYNPRW
FSGFTGYTTKVSVHVEETLPSPLLLLPPIVTLVSKWRLKNASLKGNYTNNGFLQVSCNGG
LNQMRAAICDMVTVARLLNLTLVVPELDKTSFWADPSNFDDIFDVRHFIDSLRDEVRIIK
RLPKRFSRRYGYQPLEMPPVSWSNEKYYLQQILPLFKKHQVIHFNRTDTRLANNGIPLEL
QKLRCRVNFQALKFTPDIEALGEKLVRLLQERGPFVALHLRYEMDMLAFSGCTHGCTEEE
AEELKRLRYAFPWWREKEIVSEEKRSQGLCPLTPEEAALILQALGFDKDIQIYIASGDIY
GGERRLASLRAAFPKIVKKDMLLAPGELQHFQNHSSQMAALDFIVSTASNVFVPTYDGNM
AKVVEGHRRYLGFKKTILLDRKRLVELLDLHQNGTLSWDEFTATVRQSHEGRMGQLSRRR
VIADKPKEEDYFYANPQECLCESKTCDDLFGPDNSTAVQ*

Transcript Sequence

Transcript ID

Solyc05g013140.3.1
Transcript Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT1G14020.1)
Sequence

ATCTTTTTTTTTTCTTTTATGATAATCTTAGATCTCTTCCATCTCTGTCATTTTCTTCCT
TAGATCCTGCTACTTCAACATACTGTACAAGTTTTTATCTTTTTACAGAGAAAAAAGTTT
TCAGAAAATTCATGAAAAGCATGTTTTTTTTTTTTTTAGATTTACAGCATATTGACTATT
GTCTGTCCCCACTATAGTTTTCTCCTTGTGCTACATTCTTGACACCCCTAGAAAAAAATA
ATTAATTTCCTCACCGCTTCTCATCTTTTACTTCATCATAGATTTCCCATTTTTTGGTTT
TGCTCAAAGTTGAGATTTTTTTCCATATTGGGTGTTGAAAAGTTCAGTTTTTTTCATTTT
GGGTGTTGAATTTTTTGTCAATCTGGGGTTATAATTTTCCATTTTCCCTCATTTCTTGGT
TTTGTTCCAAAGTTGAGATCTTTTTCCATATTGGGTGTTGAAAAGTTTGAATTTTTAGTT
AATCTGGGGTGACAATTTCTCATTTTCTAATGTGGTTTGAGTTTTGATGCAATTGGGTAT
TACCTTAACATGCATGTACATATGAGGAATTTGTGTATGAAGAGATTTGGGGGGTTTGGT
GATTTGGGGTTGAAGTATTGGCTATGAAGAGTGAAGAGGAGGTAAAATGGAGGTTAGATC
CGAGAGTGAGGTACATGTTAGAAGTGAGAAAGTACTACCATTACAAGGGCAGATGATACA
GAGGACTAGATTAAAAGTTTATTTTGTAAGGGTTTGTTCCAGCATTTTGATATGGACATG
TTTGGTTCAGCTTATTGCTGTTTGGGAGCTTTATAATCCACGTTGGTTTTCGGGTTTTAC
TGGTTATACTACTAAGGTGTCTGTTCATGTTGAAGAGACTTTGCCTTCTCCTTTGCTTCT
TCTTCCACCTATTGTCACTTTGGTGTCCAAATGGCGATTAAAAAACGCCAGCTTAAAAGG
AAATTATACAAATAATGGGTTTCTTCAAGTGTCCTGCAATGGTGGCTTGAATCAAATGCG
TGCAGCCATCTGTGACATGGTGACTGTTGCACGGCTTTTAAATCTAACTTTGGTTGTCCC
AGAGCTTGATAAAACATCTTTCTGGGCAGACCCTAGCAATTTTGATGATATTTTTGATGT
GAGACACTTCATTGATTCCCTAAGAGATGAAGTTCGGATAATAAAGAGACTGCCAAAGAG
GTTCAGCAGGAGATATGGATACCAACCGCTAGAAATGCCTCCTGTTAGCTGGTCAAATGA
AAAGTATTACTTGCAACAGATTCTGCCTCTCTTCAAAAAGCATCAAGTAATACATTTCAA
CAGAACAGATACTAGGCTAGCAAACAATGGGATTCCTCTTGAGCTTCAAAAACTCAGATG
TCGTGTGAATTTCCAGGCATTGAAATTCACTCCAGATATTGAGGCTTTGGGAGAAAAATT
GGTACGATTGCTTCAGGAGAGAGGGCCATTTGTAGCATTGCATCTAAGATATGAGATGGA
TATGTTGGCATTCTCTGGTTGTACCCATGGCTGCACTGAGGAGGAAGCTGAGGAGCTCAA
ACGGTTAAGGTATGCATTCCCTTGGTGGAGGGAGAAAGAGATTGTATCTGAGGAGAAGAG
ATCTCAAGGATTGTGTCCTCTCACCCCAGAAGAGGCAGCATTGATTTTGCAAGCGTTGGG
TTTTGATAAAGACATACAAATATATATTGCATCTGGTGACATTTATGGAGGTGAACGTAG
GCTTGCTTCTTTGAGAGCTGCCTTCCCAAAAATTGTGAAAAAGGACATGCTGCTAGCACC
TGGGGAATTGCAGCATTTCCAGAATCATTCATCTCAGATGGCAGCCCTGGATTTCATCGT
TTCAACTGCTAGTAATGTATTTGTTCCCACTTATGATGGGAACATGGCTAAAGTTGTTGA
AGGTCATCGTAGGTATCTTGGGTTTAAGAAAACCATTCTATTGGATCGAAAAAGACTGGT
AGAGTTATTAGATTTGCATCAGAATGGAACACTTTCATGGGATGAGTTTACAGCTACAGT
CCGGCAGTCACATGAAGGACGAATGGGACAACTGTCTCGACGCAGAGTCATTGCAGACAA
ACCAAAAGAAGAAGATTATTTTTATGCAAATCCACAGGAGTGTCTGTGTGAGAGTAAAAC
CTGTGATGACTTGTTTGGGCCTGATAATTCCACTGCTGTCCAATGAAATGAAATTCAGGG
CATGTCTTCCATGTGTAGCTACTCCATAGTGATGCACAGACGTTATGTGAAGGCGTAAAG
TTGTTGGTATGCACAATCGAGATCTGTTAGCCAAAGGGCTATAATGCGGCCTTCAATCGT
CAGGGCATTTTGGAGAGGTGTTTTGTCATAGATAGGTAGTTTATAACTGGGAGAAGCAAG
AGGGGAAAAAAATGAAGAAACCAAACGTGTCACTTGTCAAAAAGAAAAGAAGTGTCATGT
TAATGTGTTCATTCATTTTGTTCATATGTTTTTACTCTCTTCCACAAGTTGGACTGTGTT
GATTGTACTTGATACCACAGTTTTTTTTTACAGGAATATAACCTTTTTTTACTATCAAAT
GCTCTAAAATGTAGAGCAAAGAAATGTAACAGTTTGATCGTTTATCTAAATGTCATGCTC
AATAAAGGGTACTTG