Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012800.1.1
CDS Infomation

LOW QUALITY:UDP-N-acetylmuramoylalanine--D-glutamate ligase (AHRD V3.3 *** A0A0B0MT50_GOSAR)
Sequence

ATGCTTAAAGCTTCAAGCTTTAAAGTGAGCTCGAAGCTTGTTAACTCACATACAAAAATT
CAATCCTGCTACCTTGAACAAGACCTGAAGGGACAAAAAGTTGCTATAGTTGGCCTTGGA
AAATCAGGTTCTGCTGCTACAAAGCTTGCTCTTGCTAGAGGTGCTTCAGTTACAGCCATT
GATCAAAATGAGATCTCAGAATCAACATTTCACATAAATAATGGTTTATTAGATCTGAAA
AATGCGGATTTGAAGACATTTTTTGGTAATTTTGATGATAAGATTCTGAAAGAGGCGGAT
GTAGTTGTCGTTTCTCCTGGAGTTCCACTGGAAAGATATGGAATTCAATCAATGATATGT
TCGGGGAAGGAAGTACTCTCAGAGTTAGATTTTGCTGCGCAAATTATTCCGAGTTATACT
AAGGTTTTAGCAGTTACTGGAACTAATGGGAAGTCTACTGTTACCACATTTGCAGGACAG
ATACTTAATCATTTGGGTTTCGAGACGTTTGTTGGTGGCAACCTTGGAGTTCCACTCTCA
GATGCTGTTTTTCATTCGCCTGACCGGAGATCTTTAGAGGTGGCAGTGGTGGAGGTGAGT
AGTTATCAGCTGGAAATCCCACCGAAATACTTTTGTCCTTCGGTTGCTGTGATACTAAAT
CTTACTCCTGATCATCTTGAACGACACCACACGATGAAAAACTATGCTGCAATCAAGTGT
CGTATCTTTTCTCAGATGAGAGGGAAGAAAATTGGTGTTGTTCCACTTGGAAATCCATAT
CTGGATGAAGCAGTTATGGATCATGCGGATGGCGTTAGTCTTGCTTGGATTGGAGGTTCT
CCTGGTGTGAACGTTGATGTGGAGGCGAAGATTGCTGAGTTAAAGCTTCCTACAATAGAC
TGTCTTTCACAATTACAATTGAGTGAGCTGAAGGCAGTTGGGAAGCACAATTACACCAAT
GCTGCAGTGGCTGCATTATCAGTTCTTGGGTTGGATATTGAGATCAAAGCTGAAGCTTTT
AGTTCAATGATTTCCAAATTGACAACTCTGCCTCATCGAATGCAAGTTGTTCATGTAGAC
GATGATGGAATAGTTTGGGTTGACGACAGCAAGGCAACAAATGTTGAGGCTACGTATTTT
GGTTTGATTGGTTTTGAGCTGAAGTCAGTGGTTCTACTTGGTGGTGTTGCAAAGGAGGTA
GAGATGAAAGGTTCTAATGGATTTGAGCAGGTGGTTGAACCTCTTCGACACCATCGAGGT
GTAATCACTTTTGGATTTTCAGGAAAGATGATACAGAGAACACTCTGTGCTAATGGTCTA
ACCATTCCTTGTTTGAATGCTGAAACTCTCAAGGATGCTGTGAGGTTGGCAAGGAGTATA
GCACAACGTGGCGATGCCATTGTACTGAGTCCTGGTTGTGCTAGCTTTGACGAGTTCAGA
AATTTCGAGCAAAGAGGAAGGATCTTTCAAGAGCTTGCTATCTCTTCAGAGTGA

Peptide Sequence

PEP ID

Solyc05g012800.1.1
PEP Infomation

LOW QUALITY:UDP-N-acetylmuramoylalanine--D-glutamate ligase (AHRD V3.3 *** A0A0B0MT50_GOSAR)
Sequence

MLKASSFKVSSKLVNSHTKIQSCYLEQDLKGQKVAIVGLGKSGSAATKLALARGASVTAI
DQNEISESTFHINNGLLDLKNADLKTFFGNFDDKILKEADVVVVSPGVPLERYGIQSMIC
SGKEVLSELDFAAQIIPSYTKVLAVTGTNGKSTVTTFAGQILNHLGFETFVGGNLGVPLS
DAVFHSPDRRSLEVAVVEVSSYQLEIPPKYFCPSVAVILNLTPDHLERHHTMKNYAAIKC
RIFSQMRGKKIGVVPLGNPYLDEAVMDHADGVSLAWIGGSPGVNVDVEAKIAELKLPTID
CLSQLQLSELKAVGKHNYTNAAVAALSVLGLDIEIKAEAFSSMISKLTTLPHRMQVVHVD
DDGIVWVDDSKATNVEATYFGLIGFELKSVVLLGGVAKEVEMKGSNGFEQVVEPLRHHRG
VITFGFSGKMIQRTLCANGLTIPCLNAETLKDAVRLARSIAQRGDAIVLSPGCASFDEFR
NFEQRGRIFQELAISSE*

Transcript Sequence

Transcript ID

Solyc05g012800.1.1
Transcript Infomation

LOW QUALITY:UDP-N-acetylmuramoylalanine--D-glutamate ligase (AHRD V3.3 *** A0A0B0MT50_GOSAR)
Sequence

ATGCTTAAAGCTTCAAGCTTTAAAGTGAGCTCGAAGCTTGTTAACTCACATACAAAAATT
CAATCCTGCTACCTTGAACAAGACCTGAAGGGACAAAAAGTTGCTATAGTTGGCCTTGGA
AAATCAGGTTCTGCTGCTACAAAGCTTGCTCTTGCTAGAGGTGCTTCAGTTACAGCCATT
GATCAAAATGAGATCTCAGAATCAACATTTCACATAAATAATGGTTTATTAGATCTGAAA
AATGCGGATTTGAAGACATTTTTTGGTAATTTTGATGATAAGATTCTGAAAGAGGCGGAT
GTAGTTGTCGTTTCTCCTGGAGTTCCACTGGAAAGATATGGAATTCAATCAATGATATGT
TCGGGGAAGGAAGTACTCTCAGAGTTAGATTTTGCTGCGCAAATTATTCCGAGTTATACT
AAGGTTTTAGCAGTTACTGGAACTAATGGGAAGTCTACTGTTACCACATTTGCAGGACAG
ATACTTAATCATTTGGGTTTCGAGACGTTTGTTGGTGGCAACCTTGGAGTTCCACTCTCA
GATGCTGTTTTTCATTCGCCTGACCGGAGATCTTTAGAGGTGGCAGTGGTGGAGGTGAGT
AGTTATCAGCTGGAAATCCCACCGAAATACTTTTGTCCTTCGGTTGCTGTGATACTAAAT
CTTACTCCTGATCATCTTGAACGACACCACACGATGAAAAACTATGCTGCAATCAAGTGT
CGTATCTTTTCTCAGATGAGAGGGAAGAAAATTGGTGTTGTTCCACTTGGAAATCCATAT
CTGGATGAAGCAGTTATGGATCATGCGGATGGCGTTAGTCTTGCTTGGATTGGAGGTTCT
CCTGGTGTGAACGTTGATGTGGAGGCGAAGATTGCTGAGTTAAAGCTTCCTACAATAGAC
TGTCTTTCACAATTACAATTGAGTGAGCTGAAGGCAGTTGGGAAGCACAATTACACCAAT
GCTGCAGTGGCTGCATTATCAGTTCTTGGGTTGGATATTGAGATCAAAGCTGAAGCTTTT
AGTTCAATGATTTCCAAATTGACAACTCTGCCTCATCGAATGCAAGTTGTTCATGTAGAC
GATGATGGAATAGTTTGGGTTGACGACAGCAAGGCAACAAATGTTGAGGCTACGTATTTT
GGTTTGATTGGTTTTGAGCTGAAGTCAGTGGTTCTACTTGGTGGTGTTGCAAAGGAGGTA
GAGATGAAAGGTTCTAATGGATTTGAGCAGGTGGTTGAACCTCTTCGACACCATCGAGGT
GTAATCACTTTTGGATTTTCAGGAAAGATGATACAGAGAACACTCTGTGCTAATGGTCTA
ACCATTCCTTGTTTGAATGCTGAAACTCTCAAGGATGCTGTGAGGTTGGCAAGGAGTATA
GCACAACGTGGCGATGCCATTGTACTGAGTCCTGGTTGTGCTAGCTTTGACGAGTTCAGA
AATTTCGAGCAAAGAGGAAGGATCTTTCAAGAGCTTGCTATCTCTTCAGAGTGA