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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012680.3.1
CDS Infomation

DUF538 family protein (Protein of unknown function, DUF538) (AHRD V3.3 *** AT2G03350.1)
Sequence

ATGGAGAAAGCTTTAACTAAAGTTGGGAGTGTTAAAGTTGGAAGCTTTTGGCTAACCAAG
AAAGCTAAGGCAGAATTCAACAACATATCTCAAGACATCAATAGCATCTCAAATACTGTT
GAAGAGAAGGCGAAATGGATCTTTAACAAGCTAAAAGGAACGCCTATGAAGAGTTTGACA
GATCTTCTTAGAGAACGCAATCTCCCACTAGGCCTTTTCCCCCAGAACATAACAAGTTAT
GAATTAGACGAGTCCAAATCAAAGCTAACCGTTCACCTTCCCTCCCCATGTGAGATAACC
TTCAAGGATGGCTCTGTGATTAGGTATGCTACGAGGGTGAAATGCATTTTACTAAGAGAC
AAGCTTATTGGAATAGAAGGAATGAAGACTAAAGTCTTAGTATGGGTGAAAATCACAAAT
GTGTCTGTTGAAGGCAACAGGTCAGAGAAGGTTTCGTTTACTGCTGGAGTAAAGAAATCA
AGGCCAAGAGAAGCTTATGACATTCCTCGCGATGCAGTTGCAGTAAAAGAGTTTTGA

Peptide Sequence

PEP ID

Solyc05g012680.3.1
PEP Infomation

DUF538 family protein (Protein of unknown function, DUF538) (AHRD V3.3 *** AT2G03350.1)
Sequence

MEKALTKVGSVKVGSFWLTKKAKAEFNNISQDINSISNTVEEKAKWIFNKLKGTPMKSLT
DLLRERNLPLGLFPQNITSYELDESKSKLTVHLPSPCEITFKDGSVIRYATRVKCILLRD
KLIGIEGMKTKVLVWVKITNVSVEGNRSEKVSFTAGVKKSRPREAYDIPRDAVAVKEF*

Transcript Sequence

Transcript ID

Solyc05g012680.3.1
Transcript Infomation

DUF538 family protein (Protein of unknown function, DUF538) (AHRD V3.3 *** AT2G03350.1)
Sequence

TTATTCACACTCTTTTTTTAGTATACTAAACACCTCTGTTTGTTGAAGAAGAAGAAGAAG
AGGGTTTTTTTTTTTGTGGGTGTGAAGAAGAAAGAAGAATGGAGAAAGCTTTAACTAAAG
TTGGGAGTGTTAAAGTTGGAAGCTTTTGGCTAACCAAGAAAGCTAAGGCAGAATTCAACA
ACATATCTCAAGACATCAATAGCATCTCAAATACTGTTGAAGAGAAGGCGAAATGGATCT
TTAACAAGCTAAAAGGAACGCCTATGAAGAGTTTGACAGATCTTCTTAGAGAACGCAATC
TCCCACTAGGCCTTTTCCCCCAGAACATAACAAGTTATGAATTAGACGAGTCCAAATCAA
AGCTAACCGTTCACCTTCCCTCCCCATGTGAGATAACCTTCAAGGATGGCTCTGTGATTA
GGTATGCTACGAGGGTGAAATGCATTTTACTAAGAGACAAGCTTATTGGAATAGAAGGAA
TGAAGACTAAAGTCTTAGTATGGGTGAAAATCACAAATGTGTCTGTTGAAGGCAACAGGT
CAGAGAAGGTTTCGTTTACTGCTGGAGTAAAGAAATCAAGGCCAAGAGAAGCTTATGACA
TTCCTCGCGATGCAGTTGCAGTAAAAGAGTTTTGAGAGTCCGATTATTCATACAAGTACA
AATCCTCAACGATCAAAAAGATCATCGAGTAGGCTATGTTTTCATGGTTTTCTTGGTCGC
TCACTTCTCATCGTTCCAATGAACACTTCAGGAATGAATTATATGGAAACAAGTTACAAA
ATGGTGTTTGGCAGTTTAGCATACTCAGCTAGATTGTAACAGTATTGGATGGTTATATAC
ATCTAACTTTTTTTTTCTGGAATTTTTCAAGATGCTATTTATTATGGTTTCTATTTGAAG
AAAATTATTCAGCTCTCTCATATTAGGGGAGTCTAATTGAGTTGTTGAGTAAATCAATCT
TGAGATATTCTCCATTTTCTAACAAATTGTGTTTGTTTTATCAACAGTTTGCACTTTAAA
GGGTCGTTTGGCAAGCAAGAAAACCCCACCTTCTGTATGGAGCAATA